| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,296,381 | +GC | intergenic (+587/+55) | gltP → / ← yjcO | glutamate/aspartate : H(+) symporter GltP/Sel1 repeat‑containing protein YjcO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,296,380 | 1 | . | C | 96.7% | 196.3 / ‑0.7 | 63 | intergenic (+586/+56) | gltP/yjcO | glutamate/aspartate : H(+) symporter GltP/Sel1 repeat‑containing protein YjcO |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base C (25/33); total (28/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.80e-01 | |||||||||||
| * | NC_000913 | 4,296,380 | 2 | . | G | 95.2% | 192.1 / 1.5 | 63 | intergenic (+586/+56) | gltP/yjcO | glutamate/aspartate : H(+) symporter GltP/Sel1 repeat‑containing protein YjcO |
| Reads supporting (aligned to +/- strand): ref base . (2/1); new base G (26/33); total (28/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.85e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.30e-01 | |||||||||||
TCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑A‑‑C‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTG > NC_000913/4296196‑4296619 || tCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGtt > 1:19607/1‑251 (MQ=14) tATCAGGTCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGtt < 1:494598/248‑1 (MQ=12) aTCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGtt > 1:441210/1‑251 (MQ=18) aTCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGt < 1:463351/250‑1 (MQ=18) aGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAAt > 1:698982/1‑251 (MQ=21) cGCCAGACAGCGCAATTGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCaa < 1:109735/251‑1 (MQ=255) cAGACAGCGCAATAGCCTGATTTAGCGTACTTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGCCGCTTGCCGCGTCTTATCAGGCCTACCCCAGCCAGCGCTATAGCCTGCTTTAGCTTCACTTTCTGGATCGGATCCGGCGTTTCAG‑C‑AG‑AA‑‑‑TCCGACACCATTGCCCGATGGTTCG‑TTGACCGTGTCTTATCAGACCTCTCTAAACCGTAGGTTAATTTTTCCAAcc > 2:174669/1‑250 (MQ=255) aGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTca < 1:304446/251‑1 (MQ=255) gttcaataaatggATTTAGCATCATTTTTGAGATCGGATAAGGTGTTTATCCCGAATCGTTCATAAATGCCTGATTAGGCGTTTATCGTGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTTGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ATGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAATCTCTTcac < 2:623308/239‑1 (MQ=9) gCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTa < 2:576646/251‑1 (MQ=255) tttAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATACGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAAc > 2:163464/1‑251 (MQ=255) tGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAACCTCTTCACACCCGGTATCAAACCCTTcc > 2:217545/1‑250 (MQ=255) aTTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCAt > 1:388343/1‑250 (MQ=255) ggATAAGGCGTTTCTGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGCTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCATACCCTTCCATACAGCTCAGGTTc > 1:110810/1‑251 (MQ=255) ggATAAGGCGTTTATGCCGCATCCGTCATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTc < 1:105104/251‑1 (MQ=255) aTAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCa > 1:257372/1‑250 (MQ=255) acggCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAAcc < 2:388866/249‑1 (MQ=255) aaGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCaccc > 2:308270/1‑248 (MQ=255) aGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCa < 1:101783/251‑1 (MQ=255) ggCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAg < 1:4180/251‑1 (MQ=255) gCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGt < 2:612667/251‑1 (MQ=255) aTCCGCCATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTACACCAGTGCAGCGCCTTTTg > 2:656281/1‑251 (MQ=255) cGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCtt < 1:390968/251‑1 (MQ=255) cATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGtt < 2:115985/251‑1 (MQ=255) cATCAACGCCTGATGCGACGCTTAACGCGTCNTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGtt < 2:369036/251‑1 (MQ=255) aTCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGttc > 2:165693/1‑251 (MQ=255) aaCGCCTGATGCGACGCTTATCGTGTCTTATCAGTCCTACGCCAGACAGCGCAATAGCTTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑GCCGACAACAATGCCTGATGTGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTTGTTAATTTTTCAAACTCTTCACACCCGGTATCAATCCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGttcttc < 1:715768/251‑1 (MQ=21) aCGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTtcttct > 2:268061/1‑251 (MQ=255) cGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTtctc < 2:441210/251‑1 (MQ=255) gATGCGACGCTTACCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTCATTTAGCGTGATTTTGTAGGTCGGATAAGGAGTTT‑A‑‑C‑‑G‑CAGACTCCGACATCAATGCCTGATGCGACGCCTG‑CCGCGTCTTATCCGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTAAGGTTCAACCAATGCAGCGCCTTTTGCTTGTTCTTCTCGATa > 1:650132/1‑250 (MQ=21) gATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATaa < 2:154837/251‑1 (MQ=255) gtgtaaccttacagcggcTTATCCGGCCTACGTCAGTCAGCGCAATATCCTGATTTGGCGTGGTTTTGTAGGTCGGATAAGGCGTTT‑ACTC‑CG‑CA‑‑‑CCCGGCATCAATGCCTGATGCGACGCTTT‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACCCCCGGTATCAAACACTTCCATACAGCTCAGCTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTGCGCGATaaaa < 2:572090/234‑1 (MQ=255) gcgcgtaactcggcTTATCAGGCGCACGCCAGACATCGCAATAGCCGGATTTAGCGTGAGTTTGTAGGACGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACctt < 2:110810/238‑1 (MQ=25) gCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGAGATTTTGTAGGTCGGATAAGGCGTGT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGATTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACcttct > 1:327414/1‑251 (MQ=25) cTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACcttctt > 1:1514/1‑251 (MQ=255) aaCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCa < 1:148279/250‑1 (MQ=255) aCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCAcc < 2:121547/251‑1 (MQ=255) gcgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGt < 2:388343/251‑1 (MQ=255) gTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGttt > 1:571252/1‑251 (MQ=255) tattaGGCCTTCGCCAGGTAGCTCTATAGCCTGAGTGAGCGTGTTTTTGTATGTCGGATAAGGCGGTT‑A‑‑CGCGGCA‑‑‑TCCGATATCAATGCCTGATGCTACGCTTT‑CCGCGTCTTATCCGGCTTATCTTAACCGTTGGTTCATGTTTCAAGCTCGTCACACCCGGTAGCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCGTTTGCTTGTTCTTCGCGATAAAGCCTTCTTCACCGTTTa < 2:508985/244‑1 (MQ=255) aTCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGGCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAgg < 2:151762/250‑2 (MQ=255) aTCAGGCCTACGACAGACAGCGCAATAGCCTGATTTAGCGTGCTTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCCGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTAACACCCGGTATCAAACCCTTCCATACAGATCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACAGTTTAAGa > 2:591187/1‑250 (MQ=25) aGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAAcat < 2:445089/251‑1 (MQ=255) ccaggCCAGACAGCGCAATAGCCTGATTTAGCGTGATTGTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCatcagcttttcgcaaaacg < 2:525841/247‑19 (MQ=25) aCGCTAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCAtt < 1:585767/249‑1 (MQ=255) aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGccc > 2:294139/1‑251 (MQ=255) aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGccc < 1:431201/251‑1 (MQ=255) cgcgcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGCTAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGt > 2:140903/2‑250 (MQ=255) aGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGt > 2:534473/1‑250 (MQ=255) gcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTc < 2:698982/251‑1 (MQ=255) cAATAGCGTGCTTTAGCGTAATTTTGTAGGGNGGATAGGGTGTTT‑ACGC‑CG‑CA‑‑‑CCCGCCATCAATGCCTGATGCGACGCTTG‑CCGAGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCGTGTGCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCg < 2:353876/251‑1 (MQ=255) aGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAAt < 1:308270/251‑1 (MQ=255) gatgtAGCGTGAGTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCTACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAAcc < 2:257372/246‑1 (MQ=255) gATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCg < 1:406200/251‑1 (MQ=255) gATTTTGTAGGTCGGCTAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGaa > 2:51144/1‑250 (MQ=255) cgtaccgTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTACTTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATAAAGCTCAGGTTCAACCCGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAACCCTTCTTCACCGTTTCAGAACATCCTTCCCGCCCAGTACTCGGAATAACCGGTTCGGGaac > 2:90380/7‑250 (MQ=38) aTTTTGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAAt > 1:668392/1‑251 (MQ=255) tttGTAGGTCGGATAAGGCGTTT‑AAGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAAACTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTg > 2:504875/1‑251 (MQ=255) ttGTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTg < 1:607008/250‑1 (MQ=255) gTAGGTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCTGTTCGGGAAATTGCag < 2:408890/251‑1 (MQ=255) gTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATCAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAACTTGCAGAGCt > 2:411690/1‑251 (MQ=255) gTCGGATAAGGCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCt > 1:287385/1‑251 (MQ=255) agggCGTTT‑ACGC‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTAATCAGGCCTATCTTAACCGTTGGTTACTTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACCGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTCCTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTg > 2:482127/3‑251 (MQ=255) || TCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑A‑‑C‑CG‑CA‑‑‑TCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTG > NC_000913/4296196‑4296619 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |