| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,199,935 | 0 | A | G | 23.8% | 117.7 / 10.1 | 65 | I344T (ATC→ACC) | ygiF | inorganic triphosphatase |
| Reads supporting (aligned to +/- strand): ref base A (19/29); new base G (15/0); total (35/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.58e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CGGTTCCTGATTGTTTGCCTCATTACGGAAATGTTCAATTTCGATGCGTTGCCC‑GGTCGCAATAGCGTGATGCAGCCCCTGCCAGTTCTCCAG‑CCAGGCTTGCGCGACGACAGGATCATAGTAACCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGTTTGAA‑GGAGTCGCTGATTTTGCCCTGCGCTTTGGCATCTAAAAATGGCTGCC‑ATGCTTTGCTTACCAACCATTCGG‑TCAACGCCAGCTTCGCCATTGCCGTTTCGGTAGAGTAGACCGCCGTCACGGCAGACACCGCAGAAGCAATGGTCGCCTCGCATTGAGTCAGCAGATCACGTAAGTGAGTGCTCGCTTTACGCGGCACAATACCACCGAACAGCATCAGCGTATG > NC_000913/3199691‑3200179 | gggtcccTGTTTGTTTGCCTCAGTACGGAAATGTCCAATTTCGGTGCTTTGCCC‑GGTCGCAATAGCGTGATGCCTCCCCTGCCGTTTCTCCAG‑CCGGGTTTGCGCGACGACAGGATCATATTAACCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCgg < 1:157300/246‑1 (MQ=255)cgtttcccatttGTTTGCCTCATTCCGGAATTGTCTAATTTCGTGGCTTCGCCC‑GTTCGCATTCGCGTGATGCCGCCCCTGCCAGTGCCCCAC‑CCGGGCTTGCGCGCCGACAGGCACACAGTACCCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCgg < 2:254322/241‑1 (MQ=255) gTTCCTGATTGTTTGCCTCATTACGGAAATTTTCATTTTCGAGGCGTTGCCC‑GGTCGCAATGGCGTGATGCCGCCCCTGCCAGTCCTCCAG‑CCAGGCTTGCGCGACGACAGGATCATAGTAACCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCa < 1:246533/251‑1 (MQ=255) tCCTGATGGTTTGCCTCATTACGAAAATGTTAATTTTCGATCCTTTCCCC‑GGCCTCAATAGCGGGATGCAGCCCCTGCCAGTTCTCCAG‑CCAGGCTTGCGCGACGACAGGATAATAGTACCCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCGTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCaa < 1:123400/250‑1 (MQ=255) tttttttcccTCATTCGGGAAATGTTCAATTCCGAGGC‑TTGCCCCGGTCGCAATAGTGTGATGCAGCCCCTGCAAGTTCCCCGG‑CCGGGCTTGCGCGCCGACAGGATCATAGTACCCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGt < 2:96959/242‑1 (MQ=255) aTTGTTTGCCTCATTACGGAAATGTTCAATTTCGATGCGTTGCCC‑GGTCGCAATAGCGTGATGCAGCCCCTGCCAGTTCTCCAG‑CCAGGCTTGCGCGACGACAGGATCATAGTAACCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGGAAGATGGgtataaatcgggaggg > 2:268976/1‑239 (MQ=255) aTTGTTGGCCTCATTACGGAAAGGTTCAATTTCGATGCGTTGCCC‑GGTCGCAATAGCGTGATGCAGCCCCTGCCAGTTCTCCAG‑CCAGGCTTGCGCGACGACAGGATCATAGTAACCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGatat < 1:268976/239‑1 (MQ=255) gCCTCATTACGGAAATGTTCAATTTCGATGCGTTGCCC‑GGTCGCAATAGCGTGATGCAGCCCCTGCCATTTCTCCAG‑CCAGGCTTGCGCGACGACAGGATCATAGTAACCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGTTTGAA‑gg < 1:116233/250‑1 (MQ=255) gCCTCATTACGGAAATGTTCAATTTCGATGCGTTGCCC‑GGTCGCAATAGCGTGATGCAGCCCCTGCCAGTTCTCCAG‑CCAGGCTTGCGCGACGACAGGATCATAGTACCCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGTTTGAA‑gg < 1:49032/250‑1 (MQ=255) cATTCCGGAAATGTCCAATTTCGATGCGTTCCCG‑GGTCGCAATGGCGTGAGGCAGCCCCTGCCATTTCCCCAG‑CCAGGCTTGCGCGACGACAGGATCATAGTACCCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGTTTGAA‑GGAGTCg < 1:159953/251‑1 (MQ=255) agggaaagtttcaatgcctatccGTTGCCC‑GGCCGCAATCGCGTGATGCAGCCCCTGCCAGTTCTCCAG‑CCAGGCTTGCGCGACGACAGGATCATAGTAACCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGTTTGAA‑GGAGTCGCTGa < 1:184384/229‑1 (MQ=255) aaaTGTTCAATTTCGATGCGTTGCCC‑GGTCGCAATAGCGTGATGCAGCCCCTGCCAGTTCTCCAG‑CCAGGCTTGCGCGACGACAGGATCATAGTAACCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGCAAACGCTTTTCAGTTCAGCGGCATGGCGGGGAAGGTGGGTATCGGCAAAGCGTTTTAA‑GGAGTCGCTGGtttt > 1:331849/1‑251 (MQ=255) aTGTTCAATTTCGATGCGTTGCCC‑GGTCGCAATAGCGTGATGCAGCCCCTGCCAGTTCTCCAG‑CCAGGCTTGCGCGACGACAGGATCATAGTAACCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGAAGGGTAACGGCAAAGCGGTTGAA‑GGAGGCGCTGAGTTTgg > 1:374716/1‑250 (MQ=255) tcagtttCTATGCTTTGCCC‑GGTCGCAGTAGCGTGATGCAGCCCCTGCCAGTTCTCCAG‑CCGGGCTTGCGCGACGACAGGAACAGAGTACCCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGTTTGAA‑GGAGTCGCTGATTTTGCCCt < 1:364659/246‑1 (MQ=255) tttCGATGGGTTGCCC‑GGCCGCAATAGCGTGATGCACCCCCTGCCAGTCCCCCAG‑CCAGGCTGGCGCGACGACAGGATCATAGTAACCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGTTTGAA‑GGAGTCGCTGATTTTGCCCTgcgc < 2:151068/250‑1 (MQ=255) gATGCGTTGCCC‑GGTCGCAATAGCGTGAGGCAGCCCCTGCCAGTTCCCCAG‑CCAGTCTGGCGCGACGACAGGATCATAGTACCCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGTTTGAA‑GGAGTCGCTGATTTTGCCCTGCGCTTTgg < 1:457059/251‑1 (MQ=255) cGTTGCCC‑GGTCGCAATAGCGTGATGCAGCCCCTGCCAGTTCTCCAG‑CCAGGCTTGCGCGACGACAGGCTCATAGTAACCCGCCAGCAACAGTATTGCGTCAATATCACGCGTCCGGCGTGGCAACTGGTCACGGTCACGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCCGACAAGCGTTTGAA‑GGAGGCGCTGGTTTTGCCCTTCCCTTTGGcctc > 1:221552/1‑248 (MQ=255) cGTTGACC‑GGTCGCAATACCGTGATGCAGCCCCTGCCAGGTCTCCAG‑CCAGGCTTGCGCGACGACAGGATCATAGTAACCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCCCGGAAACGATCGCCGAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCTGCATTGCGGGAAACAGGGATAACACCAAAGCGGTTGAA‑GAAGTTCCCGGTTTTTCCCTGCGCTTTGTCATc > 2:385109/1‑251 (MQ=255) ttGCCC‑GGTCGCAATAGCGTGATGCAGCCCCTGCCAGTTCTCCAG‑CCAGGCTTGCGCGACGACAGGATCATAGTAACCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGGAAGGTTGATATCGGCCAAGCGTTTGAA‑GGAGGCGCTGGTTTTGCCCTTCGCTTTGGCATCtt > 1:111829/1‑250 (MQ=255) ggTCGCAATAGCGTGATGCAGCCCCTGCCAGTTCTCCAG‑CCAGGCTTGCGCGACGACAGGATCATAGTAACCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGGTATCGGCAAAGGGTTTGAA‑GGAGTCGCTGATTTTTCCCTGCGCTTTGGCATCTaaaaa > 1:340699/1‑249 (MQ=255) cGCAATAGCGTGATGCAGCCCCTGCCAGTTCTCCAG‑CCAGGCTTGCGCGACGACAGGATCATAGTAACCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGGAAGATGGATATCGGCAAAGCGGTTGAA‑GGAGTCGCTGATTTTTCCCTGCGCTTTGGCCTCTAAAAATGGcc > 1:44220/1‑250 (MQ=255) aaTAGCGTGATGCAGCCCCTGCCAGTTCTCCAG‑CCAGGCTTGCGCGACGACAGGATCATAGTAACCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGGTTTAA‑GGAGTCGCTGATTTTGCCCTGCGCTTTGGCATCTAAAAAAGGCTGcc > 1:55156/1‑251 (MQ=255) tAGCGTGATGCAGCCCCTGCCAGTTCTCCAG‑CCAGGCTTGCGCGACGACAGGATCATAGTAACCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGTGAAAGATGGATATCGGCAAAGCGTTTGAA‑GGAGTCGCTGATTTTGCCCTGCGCTTTGGCATCTAAAAATGGCTGCC‑At > 1:365962/1‑251 (MQ=255) aggCAGCCCCTGCCTGTCCCCCAG‑CCAGGCTTGCGCGACGACAGGATAATAGTAACCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGTTTGAA‑GGAGTCGCTGATTTTGCCCTGCGCTTTGGCATCTAAAAATGGCTGCC‑Atgctttgc < 1:255608/249‑1 (MQ=255) ccccTGCCAGTTCTCCAG‑CCAGGCTTGCGCGACGACAGGATCATAGTAACCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGAGATCGGTAAAGAGTTTGAAAGGA‑TCGATGGTTTTGCCCTGCGCTTTGGCATCTAAAAAAAGATACC‑Atgctttgcttcccc > 1:456520/1‑247 (MQ=255) ccAGTTC‑CCAGGCCAGGCTTGCGCGACAACAGGATCATAGTAACCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGTTTGAA‑GGAGTCGCTGATTTTGCCCTGCGCTTTGGCATCTAAAAATGGCTGCC‑ATGCTTTGCTTACCAACCAtt < 2:330523/251‑1 (MQ=255) tctcCAG‑CCAGGCTTGCGCGACGACAGGATCATAGTAACCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGGTAACGGCCAAGCGGTTGAA‑GGAGTCGCTGGTTTTGCCCTGCGCCTTGGGCTCCAAAAAAAGCCGCC‑CTGCTTTGCTTtcccaccaatccgtc > 2:87315/1‑244 (MQ=255) cagGCTTGCGCGACGACAGGATCATAGTAACCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGTTTGAA‑GGAGTCGCTGATTTTGCCCTGCGCTTTGTCATCTAAAAATGGCTGCC‑ATGCTTTGCTTACCAACCATTCGG‑TCAACGCCAg < 1:222904/251‑1 (MQ=255) ggtggcggggagacagttccATAGTAATCCGCCAGCAACAGTGTTGAGTCAAGTTCACGGGTCAGGCGTGGCAACTGGTCACGGTGGCGATCGCCTAACGGCTGGCAGAAAACGCGTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCAGAGCGTTTGAA‑GGAGTCGCTGATTTTGCCCGGCGCTTTGGCATCTAAAAATGGCTGCC‑ATGCTTTGCTTACCAGCCATTCTG‑TCTACGACAGCtt < 2:130694/232‑1 (MQ=255) cTTGCGCGACGACAGGATCATAGTAACCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAAAAGGGTATCCGCAAAGCGGTTGGA‑GGGGGCCCTGGTTTTGCCCTGCGCCTTGGCCTCCAAAAAAGGCGGCC‑ATGCTTTTCCTACCCACCATTCGG‑TCAACCCCCGCttt > 2:331780/1‑250 (MQ=255) gcgcGACGACAGGATCATAGTAACCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGGTATCGGCCAAGCGGTTGAA‑GGAGGCGCTGATTTTGCCCTGCGCTTTGGCCTCTAAAAATGGCTTCC‑CTGCTTTTTNTACCAACCCATCGG‑TCAACGCCCGCTTcccc > 2:225241/1‑248 (MQ=255) gcgACGACAGGATCATAGTAACCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGAGGGATATCGGCAAAGCGGTTGAA‑GGAGTAGCTGATTTTGACCCGGGCTTTGGCATCTAAAAATGGCTGCC‑CAGCTTTGCTTACCAACCATTCGG‑TCAACGCCAGCTTCGccct > 1:151236/1‑249 (MQ=255) acgacAGGATCATAGTAACCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGTTTGAA‑GGAGTCGCTGATTTTGCCCTGCGCTTTGGCATCTAAAAATGGCTGCC‑ATGCTTTGCTTACCAACCATTCGG‑TCAACGCCAGCTTCGCCATTGc < 1:425911/251‑1 (MQ=255) aaCCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGGAAGATGGGTATCAGCAAAGCGTTTTAA‑GGGGTCGCTGATTTTGCCCTGCGCTTTGGCATCTAAAAATGGCGGCCCAT‑CTTTTCTTTCCAACCCTTCCG‑TCCACGCCCGCTTCGCCACTTCCCTTTTGgtagagt > 2:77565/1‑249 (MQ=255) aaCCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGAAGGGTATCGGCAATGCGGTTTAC‑GGAGACGCTGGTTTTTCCCTTCGCTTTGGCACCTAAAAATTGCCGAC‑ATGCTTTGCTTACCAACCCTTCGG‑TCAACGCCAACTTccccctttcactttccgaagagta > 1:348947/1‑227 (MQ=255) aCCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGGAAGAAGGGAAACGGCAAAACGGTTTAA‑GGGGTCGCTGGTTTTTGCCTGCGCTTTTGCCTCCAAAAATGGGTGCC‑ATGCTTTTCTTTCCAACCATTCCG‑TCCACGCNCCCTTCGCCCTTGCCGCTTCGggagagtgg > 2:205879/1‑248 (MQ=255) ccGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGTTTGAA‑GGAGTCGCTGATTTTGCCCTGCGCTTTGGCATCTAAAAATGGCTGCC‑ATGCTTTGCTTACCAACCATTCGG‑TCAACGCCAGCTTCGCCATTGCCGTTTCGGTAGAGTAGAcc < 1:289037/251‑1 (MQ=255) ccAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGTTTGAA‑GGAGTCGCTGATTTTGCCCTGCGCTTTGGCATCTAAAAATGGCTGCC‑ATGCTTTGCTTACCAACCATTCGG‑TCAACGCCAGCTTCGCCATTGCCGTTTCGGTAGAGTAGAccgcc < 2:111829/251‑1 (MQ=255) aGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGAATGATATCGGCAAAGCGGTTGAA‑GGAGTCGCTGATTTTTCCCCGCGCTTTGGCATCTAAAAATAGCTGCC‑ATGCTTTTCTTTCCAACCCTTCGGGTCAA‑GCCAGCTTCCCCATTTCCGTTTCCgtaagggaaaccccccc > 2:328736/1‑237 (MQ=255) gAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGTTTGAA‑GGAGTCGCTGATTTTGCCCTGCGCTTTGGCATCTAAAAATGGCTGCC‑ATGCTTTGCTTACCAACCATTCGG‑TCAACGCCAGCTTCGCCATTGCCGTTTCGGTAGAGTAGACCGCCGTCACGGCAGacac < 1:314993/251‑1 (MQ=255) gTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGTTTGAA‑GGAGTCGCTGATTTTTCCCCGCGCTTTGGCATCTCAAAATGGCTGCC‑ATGCTTTTCTTACCAACCATTCGG‑TCAACGCCAGCTTCGCCCTTTCCCTTTCGGGAGAGGAAACCGCCGTCCCgggaggccccc > 2:168817/1‑242 (MQ=255) cAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGGTTGAA‑GGAGTCGCTGATTTTGCCCTGCGCTTTGGCATCTAAAAATGGCTGCC‑ATGCTTTGCTTACCAACCCTTCGG‑TCAACGCCAGCTTCGCCATTGCCGTTTTGGTAGAGTAAACCGCCGTCACGGCCGACACCGc > 1:329144/1‑250 (MQ=255) aaTATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATAAAGGCACAACGTTTGAA‑GGAGCCCCTGGTTTTGCCCCGCGCTTTGGCATCTAAAAATTGCTCCC‑ATGCTTTGCTTACCAACCACTCGG‑GCAACCCCAGCTTCGCCCTTTCCGTTTTGGTAGAGGAGGCCGCCGTCACgcccgacaaccccc > 2:457832/1‑238 (MQ=255) atatCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGTTTGGA‑GGAGTCGCTGATTTTGCCCTGCGCTTTGGCATCTAAAAAAGGCTGCC‑ATGCTTTGCTTACCAACCATTCGG‑GCAACGCCAGCTTCGCCATTGCCGTTTCGGGAGAGTAGACCGCCGTCACGGCAGACACCGc > 1:452201/1‑248 (MQ=255) cgcgTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGTTTGAA‑GGAGTCGCTGATTTTGCCCTGCGCTTTGGCATCTAAAAATGGCTGCC‑ATGCTTTGCTTACCAACCATTCGG‑TCAACGCCAGCTTCGCCATTGCCGTTTCGGTAGAGTAGACCGCCGTCACGGCAGACACCGCAGAAGCAAt < 1:98620/251‑1 (MQ=255) gcgTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGAAGGGTATCGGCAAAGCGGTTGAA‑AGGGGCGCCGCTTTTTGCCTGCGCTTTGGCCTCTAAAAAAAGGTGCC‑ATGCCTTGGTTTACAACCATTCCG‑TCAACGCCAGCCTCGCCATTGCCGTTTCGGGAGAGTAGACCGCCGCCACGGCAGGCACCCCAGCAGCaa > 2:101724/1‑249 (MQ=255) cgTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGGTTGAA‑GGAGTCGCTGATTTTGCCCTGCGCTTTGGCATCTAAAAATGGCTGCC‑ATGCTTTGCTTACCAACCCTTCGG‑TCAACGCCAGCTTCCCCCTTGCCGTTTCGGGTGAGTAGACCGCCGTCACGGCCGACACCGCCGGAGCaaagg > 2:172719/1‑248 (MQ=255) accTGGTCACGGTAGCGATCGCCTACCGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGTTTGAA‑GGAGTCGCTGATTTTGCCCTGCACTTTGGCATCTAAAAATGGCTGCC‑ATGCTTTGCTTACCAACCATTCGG‑TCAACGCCTGCTTCGCCATTGCCGTTTCGGTAGAGTAGACCGCCGTCACGGCAGACACCGCAGAAGCAATGGTCGCCTCGCATTg < 2:55156/249‑1 (MQ=255) aaCTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGTTTGAA‑GGAGTCGCTGATTTTGCCCTGCGCTTTGGCATCTAAAAATGGCTGCC‑ATGCTTTGCTTACCAACCATTCGG‑TCAACGCCAGCTTCGCCATTGCCGTTTCGGTAGAGTAGACCGCCGTCACGGCAGACACCGCAGAAGCAATGGTCGCCTCGCATTg < 1:168817/251‑1 (MQ=255) aCGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGTTTGAA‑GGAGTCGCTGATTTTTCCCTGCGCTTTGGCATCTAAAAATGGCTGCC‑ATGCTTTGCTTACCAACCATTCGG‑TCAACGCCAGCTTCGCCATTGCCGTTTCGGGAGAGTAGACCGCCGTCACGGCAGACACCGCAGAAGCAATGGTCGCCTCGCATTGAGTcagc > 1:118152/1‑250 (MQ=255) cGGTTGCGATCGCCGAACGGCTGGCAGAAAACGCTTTTCAGTTCAGGGGCATGGCGGGAAAGATGGTTATCGGCAATGCGTTTGAA‑GGAGTCGCTGATTTTGCCCTGCGCTTTGGCATCTAAAAATGGCTGCC‑ATGCTTTGCTTACCATCCATGCGG‑TCAACGCCAGCTTCGCCATTGCCGTTTCGGTAGAGTAGACCGTCGTCACGGCAGACACCGCAGAAGCAATGGTCGCCTCGCATTGAGTcagcag < 2:292540/251‑1 (MQ=255) cGGTAGCCACCGCCGAACGGCTGTGAGAAACCTCTTTTCAGTTCAGCGGCAGGGCTGGAAAGATGGAGATCGGCAAAGCGTTTTAA‑GGAGTCGCTGATTTTGCCCTGCGCTTTTGCTTCTAAAAATGGCTGCC‑ATGCTTTGCTTACCAACCATTCGT‑ACAACGCCAGCTTCGCCATTGCCGTTTCGGGGGAGTAGACCGCCGTAGCGGCAGACACCGCAGAAGCAATGGTCGCCTCGCATTGAGTcagcag < 2:445288/251‑1 (MQ=255) cGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGGTATCGGCAAAGCGTTTGAA‑GGAGTCGCTGATTTTGCCCTGCGCTTTGGCATCTAAAAATGGCTGCC‑ATGCTTTGCTTACCAACCATTCGG‑TCAACGCCAGCTTCGCCATTGCCGTTTCGGTAGAGTAGACCGCCGTCACGGCAGACACCGCAGAAGCAATGGTCGCCTCGCATTGAGTCAGCAGATCACg > 1:115002/1‑251 (MQ=255) gCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGGTGGGTATCGGCAAAGCGTTTGAA‑GGAGTCGCTGGTTTTGCCCTGCGATTTGGGATCTAAAAATGGGTGCC‑ATGCTTTGCTTACCAACCATTCGG‑TCAACGCCAGCCTCGCCATTGCCGTTTCGGTAGAGTAGACCGCCGGCACGGCAGACACCGCAGAAACAATGGGCGCCCTGCATTGAGTcagccggtcccggaagg > 1:208078/1‑238 (MQ=255) gCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAAATGGATATCGGCAAAGCGTTTGAA‑GGAGACGCCGATTTTGCCCTGCGCCTTGGCATCTAAAAATAGCTGCC‑AAACTTTTCTTACCAAACATTCGG‑TCCACGCCAGCTTCGCCATTGCCGTTTCGGTAGAGTAGACCCCCGTCACGGCAGACACCGCAGAAGCAAAGGTCGCCCCGCATTGAGTCCGCAGATCACGTAagt > 1:202326/1‑251 (MQ=255) cTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGGTAACGGCAAAGCGGTTGAA‑GGAGTCGCTGATTTTGCCCTGCGCTTTGGCAAATAAAAATGGCTGCC‑ATGCTTTTCTTACCAACCATTCGG‑TCAACGCCAGCTTCGCCATTGCCGGTTCGGTAGAGTAGACCGCCGTCACGGCAGACCCCGCCGAAGCAAAGGTCGCCTCGCATTGAGTCAGCAGAAAACGAAAGTGAGGGCTcc > 2:340805/1‑250 (MQ=255) gAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGTTTGAA‑GGAGTCGCTGGTTTTGCCCTGCGCTTTGGCATCTAAAAATGGCTGCC‑ATGCTTTGCTTACCAACCATTCGG‑TCAACGCCAGCTTCGCCATTGCCGTTTCGGTAGAGTAGACCGCCGTCACGGCAGACACCGCAGAAGCCATGGGCGCCTCGCCTTGAGTCAGCAGATCACGGAAGTGAGGGCTCGCTTTAc > 1:234529/1‑251 (MQ=255) gAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGTTTGAA‑GGAGTCGCTGATTTTGCCCTGCGCTTTGGCATCTAAAAATGGCTGCC‑ATGCTTTGCTTACCAACCATTCGG‑TCAACGCCAGCTTCGCCATTGCCGTTTCGGTAGAGTAGACCGCCGTCACGGCAGACACCGCAGAAGCAATGGTc < 1:87523/205‑1 (MQ=255) aaaCGCTTTTCAGTTCATCGGCATGGCGGGAAAGATGGGTATAGGCAAATCCGTTGAA‑GGGGTCGCTGATTTTTCCCTGCGGTTTGGCATCTAAAAATGGCTGCC‑ATGCTTTGCTTACCAACCATTTGG‑GCAACGCCAGCCTCGCCATTTCCGTTTCGGGAGAGTAGACCGCCGTCACGGCAGACCCCGCAGAAGCAATGGGCGCCGCGCATTGAGTCCGCAGATCACGGAAGAGAGTGCTCGCTTTAcgc > 2:283944/1‑251 (MQ=255) cGCTTTTCATTTCAGCGGCCTGGCGGGAAAGATGGATATCGGCAAAGCGTTTGAA‑GGAGTCGCTGATTTTGCCCTGCGCTTTGGCATCTAAAAATGGCTGCC‑ATGCTTTGCTTACCAACCATTCGG‑TCAACGCCAGCTTCGCCATTGCCGTTTCGGTAGAGTAGACCGCCGTCACGGCAGACACCGCAGAAGCAATGGTCGCCTCGCATTGAGTCAGCAGATCACGTAAGTGAGTGCTCGCTTTACGCGGc < 1:206978/251‑1 (MQ=255) cTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGGTATCGGCCAAGCGTTTGAA‑GGAGTCGCTGGTTTTGCCCTGCGCTTTGGCATCTAAAAATGGCTGCC‑ATGCTTTTCTTACCCACCCTTCGG‑TCAACGCCAGCTTCGCCATTGCCCTTTCGGGAAAGAAGACCGCCGTCCCGGCAAACACCGCAGAAGCAATGGTAGCCTCGCCTTGAGGCAGCAGAACACGGAAGGGAGGGCCCGCCTTACGCGGca > 2:356403/1‑250 (MQ=255) tcagttcagCGGCATGGCGGGCAAGAGGGTAATCGGCCAAGCGTTTGAA‑GGAGTCGCTGATTTTGCCCTGCGCTTTGGCATCTAAAAATGGCTGCC‑ATGCTTTGCTTACCAACCATTCGG‑TCAACGCCAGCTTCGCCATTGCCGTTTCGGTAGAGTAGACCGCCGTCACGGCAGACACCGCAGAAGCAATGGACGCCTCGCATTGAGTCAGCAGATTACGTCAGTGAGTGCTCGCTTTCAGCGGCACAAt > 1:131996/1‑250 (MQ=255) gttcagCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGGTTGAA‑GGAGTCGCTGATTTTGCCCTGCGCTTTGGCATCTAAAAATTGCTGCC‑ATGCTTTGCTTACCAACCATTCGG‑TCAACGCCAGCTTCGCCATTGCCGTTTCGGTAGAGTAAACCGCCGTCACGGCAGACACCGCAGAAGCAATGGTCGCCTCGCATTGAGTCCGCAGATCACGTAAGGGAGTGCTCTCTTTACGCGGAACAATacc > 1:358616/1‑250 (MQ=255) cagCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGTTTGAA‑GGAGTCGCTGATTTTGCCCTGCGCTTTGGCATCTAAAAATGGCTGCC‑ATGCTTTGCTTACCAACCATTCGG‑TCAACGCCAGCTTCGCCATTGCCGTTTCGGTAGAGTAGACCGCCGTCACGGCAGACACCGCAGAAGCAATGGTCGCCTCGCATTGAGTCAGCAGATCACGTAAGTGAGTGCTCGCTTTACGCGGCACAATaccacc < 1:464153/250‑1 (MQ=255) cGGCATGGCGGGAAAGATGGATATCGGCAAAGCGTTTGAA‑GGAGTCGCTGATTTTGCCCTGCGCTTTGGCATCTAAAAATGGCTGCC‑ATGCTTTGCTTACCAACCATTCGG‑TCAACGCCAGCTTCGCCATTGCCGTTTCGGTAGAGTAGACCGCCGTCACGGCAGACACCGCAGAAGCAATGGTCGCCTCGCATTGAGTCAGCAGATCACGTAAGTGAGTGCTCGCTTTACGCGGCACAATACCACCGAAc < 1:326901/251‑1 (MQ=255) gAAAGATGGATATCGGCAAAGCGTTTGAA‑GGAGTCGCTGATTTTGCCCTGCGCTTTGGCATCTAAAAATGGCTGCC‑ATGCTTTGCTTACCAACCATTCGG‑TCAACGCCAGCTTCGCCATTGCCGTTTCGGTAGAGTAGACCGCCGTCACGGCAGACACCGCAGAAGCAATGGTCGCCTCGCATTGAGTCAGCAGATCACGTAAGTGAGTGCTCGCTTTACGCGGCACAATACCACCGAACAGCATCAGCGt < 1:225241/251‑1 (MQ=255) gATGGATCTCGGCAAAGCGTTTGAA‑GGAGTCGCTGATTTTGCCCTGCGCTTTGGCATCTACAAATGGCTGCC‑ATGCTTTGCTTACCAACCATTCGG‑TCAACGCCAGCTTCGCCATTGCCGTTTCGGTAGAGTAGACCGCCGTCACGGCTGACACCGCAGAAGCAATGGTCGCCTCGCATTGTGTCAGCCGATCCCGTAAGAGAGTGGTCGATTTACCCGGCCCAATAACACCGAACAGCATCAGCGGATg > 2:382657/1‑250 (MQ=255) | CGGTTCCTGATTGTTTGCCTCATTACGGAAATGTTCAATTTCGATGCGTTGCCC‑GGTCGCAATAGCGTGATGCAGCCCCTGCCAGTTCTCCAG‑CCAGGCTTGCGCGACGACAGGATCATAGTAACCCGCCAGCAACAGTATTGAGTCAATATCACGCGTCAGGCGTGGCAACTGGTCACGGTAGCGATCGCCTAACGGCTGGCAGAAAACGCTTTTCAGTTCAGCGGCATGGCGGGAAAGATGGATATCGGCAAAGCGTTTGAA‑GGAGTCGCTGATTTTGCCCTGCGCTTTGGCATCTAAAAATGGCTGCC‑ATGCTTTGCTTACCAACCATTCGG‑TCAACGCCAGCTTCGCCATTGCCGTTTCGGTAGAGTAGACCGCCGTCACGGCAGACACCGCAGAAGCAATGGTCGCCTCGCATTGAGTCAGCAGATCACGTAAGTGAGTGCTCGCTTTACGCGGCACAATACCACCGAACAGCATCAGCGTATG > NC_000913/3199691‑3200179 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |