| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,667,126 | 0 | A | C | 36.4% | 63.6 / 12.6 | 57 | Y241D (TAT→GAT) | hcaT | putative 3‑phenylpropionate transporter |
| Reads supporting (aligned to +/- strand): ref base A (30/5); new base C (0/20); total (30/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.05e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CTTCGCTACCCTGGCGAGCAGCAATATAACGCATGGCGGCCAGGTGGCAGACCGTGAAGGTGCC‑GCAATGCAGAATTTGCACCACTATCAACCACGGCAACGCCGTAGTT‑GCTCCCATAATGCCCCAGCGCACTAC‑GCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAG‑ATAATGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTCGGACGGATGAGAAAGCCGAGCAGCATGGATGCCACGCCCAACGTCAACAGCGCGAGGATCAC > NC_000913/2666880‑2667375 | cTTCGCTACCCTGGCGAGCAGCAATATAACGCATGGCGGCCAGGTGGCAGACCGTGAAGGTGCC‑GCAATGCAGAATTTGCACCACTATCAACCACGGCAACGCCGTAGTT‑GCTCCCATAATGCCCCAGCGCACTAC‑GCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAACGCAAAG‑ATAATGACTTCCGCCACCACGCCCCGCGACCACAAATAcccc > 2:311524/1‑251 (MQ=255) cTACCCTGGCGAGCAGCATTATAACGCATGGCGGCCAGGTGGCAGACCGTGAAGGTGCC‑GCAATGCAGAATTTGCACCACTCTCAACCACGGCAACGCCGTAGTT‑GCTCCCATAATGCCCCAGCGCACTAC‑GCCGAAACTCGCCGAGATCAACAGCATATCGCGTGCACTACACCGGCGGAAAAAGTTCTTCCTAACCGCAAAG‑CAAATTACTTCCGCCACCACGCCCACCGACCACAAATACCCCA‑cccc > 2:382335/1‑249 (MQ=255) cccccagccgggcagaaagaaaaCGCATGGCGGCCGGGTGGCAGACCTGGAAGGGGCC‑GCAATGCAGAATTTGCCCCCCTATCAGCCACGGCAACGCCGTAGTT‑GCTCCCGTAATGCCCCAGCGCACTAC‑GCCGCAAATCGCCGAGACCAACAGCATATCGCGTTCACGACATCGGCGGAAAAGGTTAGTACGCAGCGCAAAG‑ATAACGACTGCCGCCACCAGGCCCAGCGACCACAAATGCACCA‑ccgcc < 2:167438/230‑1 (MQ=255) ccTGGCGAGCAGCAATATAACGCATGGCGGCCAGGTGGCAGACCGTGAAGGTGCC‑GCAATGCAGAATTTGCACCACTATCAACCACGGCAACGCCGTAGTT‑GCTCCCATAATGCCCCAGCGCACTAC‑GCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGGTTATTACTAAGCGCAAAG‑ATAATGACTTCCTCCACCACGCCCAGCGACCACAAATACCCCA‑ccgccg > 1:445783/1‑249 (MQ=255) aaccgcgtgcgggcCAGGTGGCA‑ACCGGGGAAGTGCCCGCAAGGCGGAATTTGCACCCTTACCAACCAGGGCAACGCC‑TAGTTTGCCCCAATAATGCCCCACCGC‑CTACCGCCGCAAATCGCGGAGATCAACACAAGCTCGCTTGCCCTACACCGGCGGAAAAGTTTATTCCTCAGCGCAAAG‑ATAATGCCGCCCGCCACCCCGCCCAGCTCCCACAAAACCCCCA‑CCGCCGAGGCCGAGTA‑GCCAGctgc < 2:110945/240‑1 (MQ=255) gcagggcggcCAGGTGGCAGCCCGTAAAGGTGCC‑GCAATTCAAAATTTGCCCCCCTACCAACCACGGCAACGCCGTAGTT‑GCTCCCATAATGCCCCAGCGCACTAC‑GCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTCCTCAGCGCAAAG‑ATAATGACTTCCGCCACCCCGCCCAGCGACCCCAAATCCCCCA‑CCGCCGAGGCCGAGTA‑GCCAGctgcctgc < 2:86977/247‑1 (MQ=255) aTGGCGTCAAGGTGGCAGACCGTGAAGGCGCC‑GCAATGCAGAATTTGCACCCCTATCAACCACGGCAAAGCCGTAGTT‑GCTCCCATAATGCCCCAGCGCACTAC‑GCCGAAAATCGCCGAGATCAACAGCATATCGCGGGCACTACCACGGCGGAAAAGGTTATTAATCAGCGCAAAGGATA‑TGACTTTCGCCGCCACGCCCCGCGACCACAAATACCCCA‑CCGCCCAGGCCCAGCA‑GCCacacgcccgccc > 2:395352/1‑240 (MQ=255) gggcgccCAGGTGGCAGACCGGGAAGGTGCC‑GAAATGCAGAATTTGCACCACAACCAACCACGGCAACGCCGTATTT‑GCTCCAATAATGCCCCAGCGCACTAC‑GCCGCAAAGCGCCGAGATCAACAGTATTTCGCGTGACCTACAACGGCGCAAAAGTTTATTACCCAGCGAAAAG‑ATATTGCCTTCCGCCCCCACGCCCAGCGACCACAAATCCCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAg < 1:5383/250‑1 (MQ=255) cggccgggggcagaaccttGAAGGTGCC‑GCAACGCATAATTGCCCCCCCCACCACCCACGCCAACCCCGTAGTT‑GCCCCCATAAGCCCCCAGCCCCCTCC‑GCCGCAAATCCCCGAGACCAACACCATACCGCGTGCCCCACAACGGCGAAAAATTTTATTACCCAGCGCAAAG‑AAAATGACTCCCGCCACCCCGCCCAGCCACCACAAATCCCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTaa < 2:143443/233‑1 (MQ=255) cAGGTGGCAGACCGTGAAGGTGCC‑GCAATGCAGAATTTGCACCACTATCAACCACGGCAACGCCGTAGTT‑GCTCCCATAATGCCCCAGCGCACTAC‑GCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCCGCGCAAAG‑ATAATGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCA‑CCCCCCAGGCCGAGTA‑ACCAGCTGCCTGCCAGTAAATgg > 2:90947/1‑251 (MQ=255) gTGCC‑GCAATGCAGAATTTGCACCACTATAACCCACGGCAACGCCGTAGTT‑GCTCCCATAATGCCCCAGCGCACTAC‑GCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCAATACAACGGCGGAAAAGTTTATTACTCAGCGCCAAG‑CTAATGACTTCCGCCACCACGCCCAGCGACCACAAATACACCC‑CCGCCGCGGCCGAGCA‑GCCCCCTGCATGCCAGTAAATGGCGCTAAAACCGTaactggc > 2:412507/1‑246 (MQ=255) c‑GCAATGCAGAATTTGCCCCCCTATCAACCACGGCAACGCCGTAGTT‑GCTCCCATAATGCCCCAGCGCACTAC‑GCCGCAAATCGCCGAGATCAACAGCATACCGCGTGCACTACAACGGCGAAAAAGTTTATTCCTCAGCGCAAAG‑ATAAGGACTTCCGCCACCCCGCCCAGCGACCACAAATACCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCa < 1:75345/251‑1 (MQ=255) aTCAACCACGGCAACGCCGTAGTT‑GCTCCCATAATGCCCCAGCGCACTAC‑GCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAG‑ATAATGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCC‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCCGTAAATGGCGCTAAAAACGTAATAGGCCGCATGTGCCCCCTGCacaaaaccaac > 2:258430/1‑241 (MQ=255) aTCAACCACGGCAACGCCGTAGTT‑GCTCCCATAATGCCCCAGCGCACTAC‑GCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAG‑ATAATGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCtgcctgcc > 1:87055/1‑196 (MQ=255) ccAACCACGGCAACCCCGTAGTT‑GCTCCAATAATTCCCCAGCGCTCTCC‑GCCGCAAACCGCCGATATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACCCAGCGCAAAG‑ATAATGCCTCCCGCCCCCACGCCCAGCGACCACAAATCCCCCC‑CCGCCTAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATaaccaaac < 1:144315/249‑1 (MQ=255) acccACGCCAACGTCGTAGTT‑GCCCCAATACTCCCCCAGCTCACTCC‑TCCGCAAATCGCCGAGAACAACAGCATATCGCGTGCACTACAACTGCGGAAAAGTTTATTACTCAGCGCAAAT‑ATAATGACTTCCGCCACCCCGCCCAGCGACCACAAATCCCCCA‑CCGCCGTGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATaaacaaactca < 1:335668/249‑4 (MQ=255) aaCCACGGCAACGCCGTAGTT‑GCTCACATAATGCCCCAGCGCACTAC‑GCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAG‑ATAATGACTTCCGCCACCACCCCCAGCGACCACAAATACCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCCGTAAATGGCGCTAAAACCGTCATAGGCCGCATGTTCCCCCTGCAATAAACAAACGc > 1:366756/1‑250 (MQ=255) gCAACGCCGTAGTT‑GCCCCCATAATGCCCCAGCGCACTAC‑GCCGCAATCCCCCGAGATAAACAGCATATCGCGTGCACTACACCGGCGGAAAAGTTTATTACTCAGCGCAAAG‑ATAATGCCTTCCGCCACCACGCCCAGCGACCACAAATACCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGa < 1:463709/251‑1 (MQ=255) aaCGCCGTAGTT‑CTTCCCATAATCCCCCACCCCACTAC‑CCCGCAAACCGCCAAGATCAACAGCATATCGCGTGCACTACACCGGCGGAAAAGTTTATTACTCAGCGCAAAT‑ATAATGCCTTCCTCCTCCTCGCCCAGGGACCACAAATACCCCT‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGaaa < 1:466686/251‑1 (MQ=255) ccGCCGAAGTT‑GCTCCCATAATGCCCCGGCGCACTAC‑GCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCCCAACAACGGCGGAAAAGTTTATTACTCAGCGCAAAG‑ATAATGACTTCCGCCACCACGCCCAGCGACCACAAATCCCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAg < 1:238456/250‑1 (MQ=255) gTAGTT‑GCTCCCATAATGCCCCAGCGCACTAC‑GCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAG‑ATAATGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATTTGCCCCCTGCAATAAACAAACGCAGGCC‑CGAAAGCGcc > 1:414381/1‑250 (MQ=255) ggtcgcccccAAAATGCCCCGGCGCCCGCC‑GCCGAAAATCGCCGAAAACAAAGGCTGATCGCGTGCACAACACCGGCGGAAAATTTTATTACCCAGGGCAAAT‑ATAATGCCTCCCGCCCCCACCCCCAGCGACCACAAATCCCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAGCGCCAg < 2:401354/243‑1 (MQ=255) gCTCCCATAATGCCCCAGCGCACTAC‑GCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAG‑ATAATGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAGCGCCAGTTCTg > 1:248850/1‑251 (MQ=255) gCTCCCATAATGCCCCAGCGCACTAC‑GCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGCTTATTACTCCGCGCAAAG‑ATAATGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCA‑CCGCCGAGGCCGAGCA‑GCCACCTGACTGCCAGAAAATGGCGCCACAACCGTAACAGCCCGCATGTGCCCCCTGCCCTACCCAAACCCAGGCC‑AGCAAGCCCCCGTTCTg > 2:144520/1‑251 (MQ=255) gCTCCAATAATGCCCCAGCCCACGAC‑CCCCAAAATCGCCGAGACCACCGGAATATCGCGTGCACTACAACGGCGCAAAAGTTTAGTCCCCGACGCAAAG‑ATACTGACTTCCGCCACCACGCCCAGCGACCACAAATCCCCCA‑CCGCCGAGGCCGCGTA‑GCCAGCTGCCTGCCAGTAAATGGAGCTAAAACAGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAGCGCCATTTCTg < 2:131792/251‑1 (MQ=255) gCTCACATTATGCCACAGCTCACTAC‑GCCGCAAATCGTCGAGTTCAACAGCATACCGCTTTCACTACAACGTCGGAAAATTTTATTCCTCAGCGAAAAG‑ATAACGATTTCCGCCACCACGCCCGCCGACCACAAATCCCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCGGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAGCGCCAGTTCt < 1:309918/250‑1 (MQ=255) cgcACTAC‑GCCGCAAATCGACGAGATCAAAAGTATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAC‑ATAATGACCTCCGCCACCACGCCCAGACACCACAAATACCCCA‑CCCCCGAGCCCGCCTACGCC‑CATGCCCGCCAGTAAATCGCGGTAAAACCGCAATACGACGCACGCGCCCACCCCAATAAACAAACACAGGCCCACAAA‑CGCCAGCACTGGCGCACCAGCGccccac > 2:160617/1‑246 (MQ=255) gcACTAC‑GCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAG‑ATAATGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCAc > 1:83446/1‑251 (MQ=255) aCTAC‑GCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGGTTATTACTCAGCGCAAAG‑ATAATGACTTCCGCCACCCCGCCCAGCGACCACAAATACCCCA‑CCCCCGAGGCAGAGTA‑CACCGCTGCCAGCCATTAAAAGGCGCCCAAACCGTAAGAAGACGCATATGCCCCCCGCCATAAACAAAACCAGGCA‑AAAAACCGCCCGGTCCGGCGAACCAGCGACAACCAccc > 2:448674/1‑249 (MQ=255) aC‑GCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAACGGTTATTACTCAGCGCAAAA‑ATAAAGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCA‑ACGCCGAGGCCCGGTA‑GCCCACTGCCCGCCAGTAAATGGCGCTACAACCGCAATAGGCCGCATGTTCACCCCGCCATAAACAAACCCAGGCC‑ACAAAGCACNCGGTCTGGCGGACCAGGCCCAACCACGCAgc > 2:212492/1‑250 (MQ=255) ggccgcAAACCGCCTAGATCACAAGCATATCGCGTGCATTCCAACGGCTGAAAAGTTTATTACTCATCGCAAAG‑TTAATGCCTTCCCCCACCCCGCCCAGCGACCCCAAATTCCCCA‑CCGCCGATGCCGAGTA‑TCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGAc < 1:453507/250‑1 (MQ=255) cgcAAACCGCCGCGACAAACATCATATCGCGTGCCCTCCACCGGGGAAAAATTTTATACCCCAGCGCAAAG‑AAACGGCCTCCCGCCCCCACGCCCACCAACCACAAATCCCCCC‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCaa < 2:186677/251‑1 (MQ=255) aTCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAG‑ATAATGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCCGCAATAAACAAACGCAGGCC‑AGAAAGCGCCAGTTCTGGCGAACCAGCCCCACCCCCGCAAACCACCCggg > 2:27816/1‑250 (MQ=255) cGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAG‑ATAATGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGc > 1:167583/1‑251 (MQ=255) cGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAG‑ATAATGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGctct > 1:462943/1‑251 (MQ=255) gaTCAACAGCATATCGCTTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAG‑ATAATGACTCCCGCCACCACGCCCAGCGACCACAAATCCCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCct < 1:233729/251‑1 (MQ=255) gaTCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAG‑ATAATGACTTCCGCCACCACGTCCAGCGACAACAAATACCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAAAGCAGGCC‑AGAAAGCGCCAGTTCTGGCGAACCAGCGCCCCCCACGCAGACCAACCGGTGCTCTCct > 1:114342/1‑251 (MQ=255) aaCAGCATATCGCGTGCCCTACAACGGCGGAAAATTTTATTCCACAGCGCAAAA‑ATAATGACTTCCGCCCCCACGCCCAGCGACCACAAATCCCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCctgctg < 1:90947/251‑1 (MQ=255) tatCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAG‑ATAATGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCA‑CCGCCGAGGCCAAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAAAAGGCCGCATGTGCCCCCTGCAATAAACAAAAGCAGGCC‑AGAAAGCGCCAGGTCTGGCGAACCAGCGCCAACCACGCAGAACAACCGGGGCTCTCCTGCTGGCggcct > 1:431058/1‑247 (MQ=255) ggCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAG‑ATAATGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCGGCTGGCGACTTGCCCCtt < 1:358329/250‑1 (MQ=255) cacaaCAACGGGGAAAAAGTTTATTCCCAAGCGCAAAG‑ATAATGCCTCCCCCCCCCCCGCCCAGCGACCACAAAACCCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTtgt < 2:22354/247‑1 (MQ=255) cACTACAACGGCGAAAAAGTTTATTACCAAGCGAAAAG‑AAAATGCCTCCCGCCACCACGCCCAGCGACCAAAAATCCCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAAGGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCGCTCCTGCTGGCGACTTGCCCCTtgt < 2:414381/251‑1 (MQ=255) gAAAAGTTTATTACCCACCGCAAAG‑AAAAGGACTTCCCCCACCCCCCCCAGCGACCACAAATCCCCCC‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGTCTTGCCCCTTGTGGCTGAAtcgtcg < 2:299035/251‑1 (MQ=255) tcccggacacAAAG‑ATAATGCCTTCCGCACCCGCGCCAAGCCACCACAAATCCCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTCGGACGGATgag < 2:241157/241‑1 (MQ=255) aCTCAGCGCAAAG‑ATAATGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCA‑CCGCCGCGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTCGGACGGATgaga > 1:376492/1‑250 (MQ=255) aCTCAGCGCAAAG‑ATAATGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTCGGACGGATgaga > 1:201660/1‑250 (MQ=255) caaaaG‑ATAATCCCTCCCGCCCCCCCGCCCGGCGCCCACAAAGCCCCCC‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTCGGACGGATGAGAAAGCCGag < 2:50366/249‑1 (MQ=255) aaTGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTCGGACGGATGAGAAAGCCGAGCAGCATgg > 1:118187/1‑251 (MQ=255) gACTTCCGCCACCACGCCCAGCGACCACAAATACCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTCGGACGGATGAGAAAGCCGAGAAGCATGGATg > 1:351989/1‑251 (MQ=255) aCTTCCGCCACCCCGCCCAGCGACCACAAATACCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTCAAACCGAAATAGGCCGCATGTGCCCCCTGCAATCAACAAACGAAAGCC‑AGAAAGCGCCAGTTATGGCGAACCAGCACCAACCACGCAGCCCAACCGGTGCTCTCCTGCTGCCGACTTGCCCCTTGTCGCCGCATCGTCGGACGGCTGACAACGCCGagccacctggaagc > 2:239757/1‑240 (MQ=255) cccacccCGCCCAGCGACAACAAATCCCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTCGGACGGATGAGAAAGCCGAGCAGCATGGATGCCACGcc < 1:346305/250‑1 (MQ=255) cacGCCCAGCGACCACAAATACCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTCGGACGGCTGAGAAAGCCGAGCAGCATGGATGCCACGCCCAACg > 2:163399/1‑251 (MQ=255) gCCCAGCGACCACAAATACCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTCGGACGGATGAGAAAGCCGAGCAGCATGGATGCCACGCCCAACGTc > 1:447320/1‑250 (MQ=255) ccccagggcccACAAATACCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTCGGACGGATGAGAAAGCCGAGCAGCATGGATGCCACGCCCAACGTCa < 2:167583/242‑1 (MQ=255) gCGACCACAAATCCCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATaaa < 2:367850/98‑1 (MQ=255) gCGACCACAAATACCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATaaa > 1:367850/1‑98 (MQ=255) aaTACCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTCGGACGGATGAGAAAGCCGAGCAGCATGGATGCCACGCCCAACGTCAACCGCGCGAGGATc > 2:197422/1‑251 (MQ=255) aCCCCAACCGCCGTGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTCGGACGGATGAGAAAGCCGAGCAGCATGGATGCCACGCCCAACGTCAACAGCGCGAGGATCAc < 1:405367/251‑1 (MQ=255) | CTTCGCTACCCTGGCGAGCAGCAATATAACGCATGGCGGCCAGGTGGCAGACCGTGAAGGTGCC‑GCAATGCAGAATTTGCACCACTATCAACCACGGCAACGCCGTAGTT‑GCTCCCATAATGCCCCAGCGCACTAC‑GCCGCAAATCGCCGAGATCAACAGCATATCGCGTGCACTACAACGGCGGAAAAGTTTATTACTCAGCGCAAAG‑ATAATGACTTCCGCCACCACGCCCAGCGACCACAAATACCCCA‑CCGCCGAGGCCGAGTA‑GCCAGCTGCCTGCCAGTAAATGGCGCTAAAACCGTAATAGGCCGCATGTGCCCCCTGCAATAAACAAACGCAGGCC‑AGAAAGCGCCAGTTCTGGCGAACCAGCGCCAACCACGCAGACCAACCGGTGCTCTCCTGCTGGCGACTTGCCCCTTGTGGCTGAATCGTCGGACGGATGAGAAAGCCGAGCAGCATGGATGCCACGCCCAACGTCAACAGCGCGAGGATCAC > NC_000913/2666880‑2667375 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |