| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,296,764 | 0 | T | G | 35.6% | 114.1 / 11.4 | 73 | L87F (TTA→TTC) | ccmB | cytochrome c maturation protein B |
| Reads supporting (aligned to +/- strand): ref base T (12/35); new base G (26/0); total (38/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.48e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GGATAGTCAGCGGTAACACCAGTATGCTGAGCAGCACACCACCGCGCTTAAGTCCCACTGTCAGCGCCACGCCCGGTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑CCCAGATAATGCCCGGTGCAATACGCGCCAGCAGTTGCGGCTCCGGACCGATACTGAGCGG‑AAAAAGGGTAA‑TTACAATCAGGAAGAACCACAGCGGGTTGGCGATTTCGGCGCTATGGCGAAACGCTACACGCAGCTCAAGACGGAAAATGC > NC_000913/2296514‑2297011 | gtaTAGTCAGCGGTAACCCCAGAATGCTGAGCAGCACCCCGCCGCGATGAAGTCCCACTGTCAGCGCCACGCCCGGGGCACCGAGAAAGCCAAGCGTGGGCGTTCCCAGCAGCAGCGGCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGt < 2:98095/249‑1 (MQ=255)ggATAGGCAGCGGTAACCCCAGTATGCTGAGCAGCACACCCCCGCGCTTAAGTCCCACTGTCAGCGCCACGCCCGGTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGt < 2:10911/251‑1 (MQ=255) gTCAGCGGTAACACCAGTATGCTGAGCGGCACACCCCCGCGCTTAAGTCCCACTGTCAGCGCCACGCCCGGTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACgg < 2:252403/251‑1 (MQ=255) cAGCGGTAACACCAGTATGCTGAGCAGCACACCACCGCGCTTAAGTCCCACTGTCAGCGCCACGCCCGGTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGGAACGGc > 1:455704/1‑250 (MQ=255) gTAACACCAGTATGCTGAGCAGCACACCACCGCGCTTAAGTCCCACTGTCAGCGCCACGCCCGGTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCCTTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAAAGGcaacaa > 1:428596/1‑250 (MQ=255) aaccccAGTATGCTGAGCAGCACACCACCGCGCTTAAGTCCCACTGTCAGCGCCACGCCCGGTGCACCGAGAAATCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGTCGGGCAAGGGTAACGGCAACAACA‑t < 1:377477/247‑1 (MQ=255) aaccccAGTATGCTGAGCAGCACACCACCGCGCTGAAGTCCCACTGGCAGCGCCACGCCCGGTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCAGCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑t < 2:61503/247‑1 (MQ=255) cacCAGTATGCTGAGCAGCACACCACCGCGCTTAAGTCCCACTGTCAGCGCCACGCCCGGTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGGAAAGGCAacaacaac > 1:297565/1‑248 (MQ=255) cccAGTATGCTGAGCAGCACACCACCGCGCTTAAGTCCCACTGTCAGCGCCACGCCCGGTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCaa < 1:295759/250‑1 (MQ=255) gTATGCTGGGCAGCACACCACCGCGCTTAAGTCCCACTGTCAGCGCCACGCCCGGTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGGAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAAtggt < 2:117393/251‑4 (MQ=255) gTATGCTGAGCAGCACCCCCCCGCGCTTAAGTCCCACTGTCAGCGCCCCGCCCGGTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGt < 2:455704/251‑1 (MQ=255) gTATGCTGAGCAGCACACCACCGCGCTTAAGTCCCACTGTCAGCGCCACGCCCGGTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGt < 1:80171/251‑1 (MQ=255) aTGCTGAGCAGCACACCACCGCGCTTAAGTCCCACTGTCAGCGCCACGCCCGGTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGGCACCGCACCAACA‑TCAATTgatc > 1:318900/1‑248 (MQ=255) tGCTGAGCAGCACACCACCGCGCTTAAGTCCCACTGTCAGCGCCACGCCCGGTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGGAAAGGCAAAAACA‑ACAATTGttt > 2:456007/1‑249 (MQ=255) cagcaCACCACCGCGCTTAAGTCCCACTGTCAGCGCCACGCCCGGTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCCAGGGGAACGGCCACAACA‑TCCATTTTTCAAGACTGc > 1:93951/1‑251 (MQ=255) gcaCACCACCGCGCTTAAGTCCCACTGTCAGCGCCACGCCCGGTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCCAAGGTAAAGGCAACAAAA‑TCAAATGTTCTAGaaagccg > 2:61135/1‑245 (MQ=255) cgcgCTTAAGTCCCACTGTCAGCGCCACGCCCGGTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACCTCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGCGTACCGGCAGACCGGTTACCATCCAGTGCGCCATAACCTTCGCCAGCACAAAGGCGGGCAAGGGGTACGGCAA‑AACAAGCAATCGTTCAAGaacgccggactcaaa > 2:398784/1‑236 (MQ=255) gcTTAAGTCCCACTGTCAGCGCCACGCCCGGTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGGAACGGCAACAACA‑TCAATTGTTTAAGACTGCCggccctcaaaacg > 1:61472/1‑239 (MQ=255) ccTTAAGCCCCACTGTCAGCGCCACGCCCGGNGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCg < 2:222095/250‑1 (MQ=255) aaGTCCCACTGTCAGCGCCACGCCCGGTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCa < 1:84331/250‑1 (MQ=255) cctgccAGCGCCCCGCCCGGTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAg < 2:68994/246‑1 (MQ=255) tGTCAGCGCCACGCCCGGTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCCAGGGTAACGGCAACAACA‑TCAATTGTTCAAAACTGCCGTCCTGCAAATCGTCACGGAACaatc > 1:170121/1‑248 (MQ=255) gTCAGCGCAACGCCCGGTGCACCGAGAAAGCCAAGCGTGGGCGTTCCCAGCAGCAGCGTCAGCGCCATCGCTGGCCAGCAATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTc < 2:84049/250‑1 (MQ=255) aGCGCCACGCCCGGTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCCAGGGGAACGGCAACAACA‑ACAATTGTTCAAGAATGCCGGCCCGCAAAACGTCACGGGACAGTCGTTc > 1:344930/1‑251 (MQ=255) gcgcCACGCCCGGTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGGAAGGGTAACGGCAACAACA‑ACAAATGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGGCGTTcc > 1:12212/1‑251 (MQ=255) ccGGTGCACCGAGAAAGCCAAGCGGAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGGCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGc < 1:10/251‑1 (MQ=255) cGGTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCGAGGGGAACGGCAACAACA‑ACAATTGTTCAAGACTGCCGTCCTGCAAAACGTCACGGaaaaatcg > 1:78067/1‑231 (MQ=255) cGGTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCg < 2:78067/237‑1 (MQ=255) aCCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATg < 1:418930/251‑1 (MQ=255) aaGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCaa < 2:360284/182‑1 (MQ=255) aaGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGGAACGGccaaaaaatcaa > 1:360284/1‑171 (MQ=255) aGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGTGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑cc < 1:375642/250‑1 (MQ=255) ccccAGCAGAAGCGCCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑CCCAGATa < 2:277162/249‑1 (MQ=255) ggcggggTCAGCGCCATCCCTGGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑CCCAGATAATGCCCgg < 2:356330/245‑1 (MQ=255) cgcCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGGAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑CCCAGATAATTCCCGGTGCAATAcgcg > 1:122399/1‑251 (MQ=255) gcCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAAGGGAACGGCAAAAACA‑TCCATTGTTCAAGAACGCCGTCCCGCCAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGGAGCGCAACAA‑CCCAGACAAAGCCCGGTGCACTACgcgc > 1:386434/1‑251 (MQ=255) cACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGGAAAGGCAAAAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCCGCAAGGATGAAAACAGCGCAGCAA‑CCCAGAAAAATCCCGGGGCAAAAAGCGCcagac > 2:45598/1‑249 (MQ=255) ccagccaTAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGGGACGGCAACAACA‑TCCATTGTTCAAACCTGTCGGCCTCCAACACCCCACGGAAAAGACCTTCCAGCGCCAACAAGGGTGTAAACAACGCAGCAA‑CCCAGAGAATTCCCgggggcaaaagcgcccgcacgtg > 2:349257/1‑228 (MQ=255) agccaTAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTTTTCAAGACTGCCGTCCTGCAAAACGTCACGGAACAGTCGTTCCAGCGCCCGCAAGGATGGAag > 1:294355/1‑199 (MQ=255) agccaTAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCAGCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAag < 2:294355/199‑1 (MQ=255) gccaTAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑CCCAGATAATGCCCGGTGCAATACGCGCCAGCAGTTGCGGCt < 1:266105/251‑1 (MQ=255) caTAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCACGGGTAACGGCAACCACA‑TAAAATGTTCAAAACTGCCGCCCTGGACATCGCCCCGGACCCATCGGTCCAACGCCAACAAGGATGAAAGCCGCGCCGCAC‑CCCAGATACTACCCCGGGCACTACGCGCCCGCAGTTgagggtcc > 2:57316/1‑244 (MQ=255) caTAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑CCCAGATAATGCCCGGTGCAATACGCGCCAGCAGTTGCGGCTcc < 2:406902/251‑1 (MQ=255) aCATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑CCCAGATAATGCCCGGTGCAATACGCGCCAGCAGTTGCGGCTCCGGAcc < 2:409703/251‑1 (MQ=255) tCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGCTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAAGGGAACAGCAACAAAA‑AAAAATCCTCAAGACAGCCGCCCTGCAAAACGTCACGGAACAGACGTTCCAGCGCGAGAAAGGATGCAAGCAGCGCAACAA‑CCCAGATAATGCCCCGCGGAATACGCGCCCGCAGTTGCGGCACCGGACCGAt > 1:269718/1‑251 (MQ=255) cccAGTAGCATTGCTACCAGTGGCGAAAGGNTGAGTAACGGCAGACCGGTTACCAACCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑CCCAGATAATGCCCGGTGCAATACGCGCCAGCAGTTGCGGCTCCGGACCGATACTGa < 2:220268/250‑1 (MQ=255) cAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑CCCAGATAATGCCCGGTGCAATACGCGCCAGCAGTTGCGGCTCCGGACCGATACTGAGCg < 1:171076/251‑1 (MQ=255) aGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTTCCATCCAGTGCGCCATCACCGTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑GCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑CCCAGATAATGCCCGGTGCAATACGCGCCAGCAGTTGCGGCTACGGACCGATACTGAGCgg < 2:389744/251‑1 (MQ=255) aGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCCGGGGGAACCGCAACCAAA‑ACAAATGTTCAACACTGCCGTCCCGCAAATCGCCACGGAAAAGCCGTTTCCGCGCCAACCAGGAAGAAAGCAGGGCAGCAA‑CCCCGATAAAGCCCGGAGCAATACGCGCCAGCAGTTGCGGCCCCGGACCGATTCTGAgggg > 1:446236/1‑248 (MQ=255) cATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCCAATCGTCACGGGACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑CCCAGATAATGCCCGGGGCAATAAGCGCCAGCAGGTTCGGGGCCGGACCGGTACTGAGCGG‑aaaa > 1:155365/1‑250 (MQ=255) gCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑CCCAGATAATGCCCGGTGCAATACGCGCCAGCAGTTGCGGCTCCGGACCGATACTGAGCGG‑AAAAAggg < 1:45959/250‑1 (MQ=255) aCCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑CCCAGATAATGCCCGGTGCAATACGCGCCAGCAGTTGCGGCTCCGGACCGATACTGAGCGG‑AAAAAGGGTa < 1:314604/249‑1 (MQ=255) aCCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCCTCCTGCAAATCCTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑CCCAGGTAATGCCCGGTGCAATACGCCCCAGCAGCTGGGGGTCCGGACCGATACTGAGCGG‑AAAAAGGGGAA‑t > 1:75123/1‑251 (MQ=255) gATGAGAAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGGAACGGGCACAAAA‑TCAATTGTTTCAGACCGCCGGCCCGCAAATCGTCACGGGACAGGCGTTCCCGGGCCAGCAAGGGTGAAAGCAGCGCAGCAAACCCA‑ATAAAGCCCGGTGCAATACGCGCCAGCAGGTGGGGCACCGGACCGGTACTGAGAGG‑GAAAAGGGGAAGTTACAA‑CAGga > 1:183036/1‑248 (MQ=255) aGTAACGGCAGACCGGTGACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGGCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑CCCAGATAATGCCCGGTGCAATACGCGCCAGCAGTTGCGGCTCCGGACCGATACTGAGCGG‑AAAAAGGGTAA‑TTACAATCAGGAAGAACca < 2:95244/251‑1 (MQ=255) aaCGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGGAACGGCAACAACA‑TCAATTTTTCAAGAATGACGGCCTGCAAATCGCCACGGGACAATCGGTCCAGCGCCAGACAGGATGAAAGAAGCGCAGCAA‑CCCAGATAAAGCCCGGTGCCATAAGCGGCAGCAGGTGCGGCTCCGGGCCGGAACTAGGCGGGAAAAAGGGAAA‑TT‑CAATCAGGAAGAAcccaa > 1:212840/1‑247 (MQ=255) aaCGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGGAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCCGCAAATCGTCACGGAACAGGCGTTCCAGCGCCAGCCAGGGTGAAAGCAACGCAGCAA‑CCCAGATAATGCCCGGGGCCATACGCGCCAGCAGGTGCGGCTCCGGGCCGATACTGAGCGG‑GAAAAGGGGAA‑TTTCAATCAGgaagaaacaa > 1:167580/1‑245 (MQ=255) cAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGGAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAAACGTCCCGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑CCCAGATAATGCCCGGGGCAATACGCGCCCGCAGGTGCGGCCCCGGACCGAGACTGAGCGG‑AAAAAGGGGAA‑TTACAATCAGGAAGAACcaacgggggg > 2:441885/1‑243 (MQ=255) aCCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGGAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCTTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑CCCAGATAATGCCCGGTGCAATACGCGCCAGCAGTTGCGGGTCCGGGCCGGTACTGGGCGG‑AAAAAGGGGAA‑TTACAATCAAGAAGAACCACAGCGGGTTgg > 1:361481/1‑251 (MQ=255) cGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGGAACGGCCACAACA‑TCCATTGTTCAAGACTGCCGCCCTGCCAATCGTCACGGAACAATCGTTCCAGCGCCAGCAAGGATGAAAACAGCGCAGCAA‑CCCAGATAATTCCCGGGGCCATACGCGCCCGCGACTGCGGCTCCGGGCCGATACTGAGCGG‑GAAAAGGGGAA‑TTACAATCACgaagacacaacacggggtgggg > 2:8205/1‑234 (MQ=255) ggTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCCAGGGGAACGGCCACAACA‑TCAATTGTTCAAAACTGCCGTCCTGCAAATCGTCACGGAACAATCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑CCCAGATAATGCCCGGTGCAATACGCGCCAGCAGTTGCGGCTCCGGACCGATACTGAGCGG‑AAAAAGGGGAA‑TTACCATCAGGAAGAAACCCAGCGGGTTTGCg > 1:339205/1‑250 (MQ=255) gTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCCAGGGTAACGGCCCCAACA‑TCAATTGTTCCAGACTGCCCTCCTGCAAATCGTCCCGGAACAGTCGTTCCATCGCCAGCACCGATGGAAGCAGCGCCGCCA‑ACCAGATAATTCCCGGGGGAATACGCGCCCTCCCGTGGGGGTCCGGCCCGATACTGGGCGG‑GCAAAGGGTCA‑TTACAATCAGGACGTACCACAGCGGGTTGGCGAt > 2:86683/1‑251 (MQ=255) gTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑CCCAGATAATGCCCGGTGCAATACGCGCCAGCAGTTGCGGCTCCGGACCGATACTGAGCGG‑AAAAAGGGTAA‑TTACAATCAGGAAGAACCACAGCGGGTTGGCGAt < 1:61135/251‑1 (MQ=255) gTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGGAACGGCAACCACA‑TCAATTGTTCAAGACTGCCGGCCTGCAAATCGTCACGGAACAGTGGTTCCAGCGCCAGCAAGGAAGAAAGCAGCGCAGCAA‑ACCAGAAAAAGCCCGGGGCAATAAACGCCAGCAGGTTCGGCCCCCGGCCGAAACTGGGCGG‑AGAAAGGGTAA‑TTACAATACGgaagagaccccgcgggggggggat > 2:379149/1‑232 (MQ=255) tACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑CCCAGATAATGCCCGGTGCAATACGCGCCAGCAGTTGCGGCTCCGGACCGATACTGAGCGG‑AAAAAGGGTAA‑TTACAATCAGGAAGAACCACAGCGGGTTGGCGAtt < 2:17668/250‑1 (MQ=255) ccAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCCGCAAGGATGAAAGCAGCGCAGCAA‑ACCAGATAATGCCCGGTGCAATACGCGCCAGCCGTTGCGGCTCCGGACCGATACTGAGCGG‑AAAAAGGGGAA‑TTACAATCAGGAAGAAACACCGCGGGTTGGCGATTTCGGCGCTATGGCGAAACGCTACACGc > 1:402353/1‑251 (MQ=255) cAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑CCCAGATAATGCCCGGTGCAATACGCGCCAGCAGTTGCGGCTCCGGACCGATACTGAGCGG‑AAAAAGGGTAA‑TTACAAt < 1:303316/195‑1 (MQ=255) cAGCACAACGGCGGGCAAGGGGAACGGCAACAACA‑TCAATTGTTCCAAACTGCCGTCCTGCAAATCGGCACGGAACAGTCGTTCCAGCGCCAGCCAGGGTGCAAGCAGCGCCGCAA‑CCCAGATAATGCCCGGGGCAATACGCGCCAGCAGTTGCGGCTCCGGACCCCTACTGAGCGG‑AAAAAGGGGAA‑TTACAAt > 2:303316/1‑195 (MQ=255) cacaACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑CCCAGATAATGCCCGGTGCAATACGCGCCAGCAGTTGCGGCTCCGGACCGATACTGAGCGG‑AAAAAGGGTAA‑TTACAATCAGGAAGAACCACAGCGGGTTGGCGATTTCGGCGCTATGGCGAAACGCTACACGCAGCt < 1:119693/251‑1 (MQ=255) aCGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑CCCAGATAATGCCCGGTGCAATACGCGCCAGCAGTTGCGGCTCCGGACCGATACTGAGCGG‑AAAAAGGGTAA‑TTACAATCAGGAAGAACCACAGCGGGTTGGCGATTTCGGCGCTATGGCGAAACGCTACACGCAGCTCAAg < 2:23007/251‑1 (MQ=255) cggcggGCAAGGGGAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑CCCAGATAATGCCCGGTGCAATACGCGCCAGCAGTTGCGGCTCCGGGCCGATACTGAGCGG‑AAAAAGGGGAA‑TTACAATCAGGAAGAACCACAGCGGGGTGGCGGTTTCGGCGCTATGGGGAAACGCTACACGccgccca > 2:108235/1‑242 (MQ=255) ggcggGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑CCCAGATAATGCCCGGTGCAATACGCGCCAGCAGTTGCGGCTCCGGACCGATACTGAGCGG‑AAAAAGGGTAA‑TTACAATCAGGAAGAACCACAGCGGGCTGGCGATTTCGGCGCTATGGCGAAACGCTACACGCAGCTCAAGAc > 2:27376/1‑251 (MQ=255) cAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑CCCAGATAATGCCCGGTGCAATACGCGCCAGCAGTTGCGGCTCCGGACCGATACTGAGCGG‑AAAAAGGGTAA‑TTACAATCAGGAAGAACCACAGCGGGTTTGCGATTTCGGCGCTATGGCGAAACGCTACACGCAGCTCAAGACGGaaaa < 1:221146/251‑1 (MQ=255) aGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑CCCAGATAATGCCCGGTGCAATACGCGCCAGCAGTTGCGGCTCCGGACCGATACTGAGCGG‑AAAAAGGGTAA‑TTACAATCAGGAAGAACCACAGCGGGTTGGCGATTTCGGCGCTATGGCGAAACGCTACACGCAGCTCAAGACGGAAAATg > 1:306705/1‑251 (MQ=255) gggTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑CCCAGATAATGCCCGGTGCAATACGCGCCAGCAGTTGCGGCTCCGGACCGATACTGAGCGG‑AAAAAGGGTAA‑TTACAATCAGGAAGAACCACAGCTGGTTGGCGATTTCGGCGCTATGGCGAAACGCTACACGCAGCTCAAGACGGAAAATgc < 1:297652/251‑1 (MQ=255) | GGATAGTCAGCGGTAACACCAGTATGCTGAGCAGCACACCACCGCGCTTAAGTCCCACTGTCAGCGCCACGCCCGGTGCACCGAGAAAGCCAAGCGTAGGCGTTCCCAGCAGCAGCGTCAGCGCCATCACTTGCCAGCCATAAACATCCATTCCCAGTAGCATTGCTACCAGTGGCGAAAGGATGAGTAACGGCAGACCGGTTACCATCCAGTGCGCCATCACCTTCGCCAGCACAACGGCGGGCAAGGGTAACGGCAACAACA‑TCAATTGTTCAAGACTGCCGTCCTGCAAATCGTCACGGAACAGTCGTTCCAGCGCCAGCAAGGATGAAAGCAGCGCAGCAA‑CCCAGATAATGCCCGGTGCAATACGCGCCAGCAGTTGCGGCTCCGGACCGATACTGAGCGG‑AAAAAGGGTAA‑TTACAATCAGGAAGAACCACAGCGGGTTGGCGATTTCGGCGCTATGGCGAAACGCTACACGCAGCTCAAGACGGAAAATGC > NC_000913/2296514‑2297011 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |