Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,795,656 Δ5,717 bp glaR[nrdE] glaR, kbp, yqaE, ygaV, ygaP, stpA, alaE, ygaC, ygaM, nrdH, [nrdI], [nrdE]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2795656 2801372 5717 59 [0] [0] 59 glaR–[nrdE] glaR,kbp,yqaE,ygaV,ygaP,stpA,alaE,ygaC,ygaM,nrdH,[nrdI],[nrdE]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 27956550 (0.000)59 (1.030) 58/488 0.0 100% intergenic (+2/‑19) gabP/glaR 4‑aminobutanoate:H(+) symporter/DNA‑binding transcriptional repressor GlaR
?NC_000913 2801373 = 0 (0.000)coding (409/411 nt)
coding (26/2145 nt)
nrdI
nrdE
dimanganese‑tyrosyl radical cofactor maintenance flavodoxin NrdI
ribonucleoside‑diphosphate reductase 2 subunit alpha

GGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCCGCGCCGGAGATGTGATTGCCCGGAAATGCGGCGTGCCGTGGCTGTACCGTTTTGAACTCATGGGTACGCAAAGCGATATCGAAAACGTTCGTAAAGGAGTAACCGAATTTTGGCAACGACAACCGCAGAATGCCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGTCATTACGCTGTT  >  NC_000913/2801126‑2801613
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                
gcaaaattctgcgagcagaaggaagcgaaattcgcttgcgaatgtggctttatccgtggctcacctggctagtcatcggctttattacctttgtgttggtagtgatgctattccgtccggcgcaacagttagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggtaaaaaacacccgttcataatacgcgctgatcTGAc                                                                                                                                                                                                                                               <  1:129207‑M2/4‑1 (MQ=255)
  aaaattctgcgagcagaaggaagcgaaattcgcttgcgaatgtggctttatccgtggctcacctggctagtcatcggctttattacctttgtgttggtagtgatgctattccgtccggcgcaacagttagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGc                                                                                                                                                                                                                                             >  2:364230‑M2/246‑251 (MQ=255)
   aaattctgcgagcagaaggaagcgaaattcgcttgcgaatgtggctttatccgtggctcacctggctagtcatcggctttattacctttgtgttggtagtgatgctattccgtccggcgcaacagttagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataataagcgctgatcTGACGc                                                                                                                                                                                                                                             >  2:191549‑M2/245‑250 (MQ=255)
    aattctgcgagcagaaggaagcgaaattcgcttgcgaatgtggctttatccgtggctcacctggctagtcatcggctttattacctttgtgttggtagtgatgctattccgtccggcgcaacagttagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGc                                                                                                                                                                                                                                             >  1:327853‑M2/244‑249 (MQ=255)
          gcgagcagaaggaagcgaaattcgcttgcgaatgtggctttatccgtggctcacctggctagtcatcggctttattacctttgtgttggtagtgatgctattccgtccggcgcaacagttagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGaa                                                                                                                                                                                                                                        <  1:439805‑M2/11‑1 (MQ=255)
             agcagaaggaagcgaaattcgcttgcgaatgtggctttatccgtggctcacctggctagtcatcggctttattacctttgtgttggtagtgatgctattccgtccggcgcaacagttagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaaaacccgttcataatacgcgctgatcTGCCGCAGGCAACGATg                                                                                                                                                                                                                                  >  1:389900‑M2/235‑251 (MQ=255)
                       agcgaaattcgcttgcgaatgtggctttatccgtggctcacctggctagtcatcggctttattacctttgtgttggtagtgatgctattccgtccggcgcaacagttagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCAcg                                                                                                                                                                                                                        <  1:374148‑M2/27‑1 (MQ=255)
                          gaaattcgcttgcgactgtggctttatccgtggctcacctggctagtcatcggctttattacctttgtgttggtagtgctgctattccgtccggcgcaacagttagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaaactggtattgtggcaaaaaacacccgttcaacataagcgctgatcTGACGCAGGGAACGAGGGATTACCACgcgc                                                                                                                                                                                                                     >  2:182788‑M2/222‑251 (MQ=255)
                            aattcgcttgcgaatgtggctttatccgtggctcacctggctagtcatcggctttattacctttgtgttggtagtgatgctattccgtccggcgcaacagttagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAAc                                                                                                                                                                                                                                      >  1:15003‑M2/220‑232 (MQ=255)
                            aattcgcttgcgaatgtggctttatccgtggctcacctggctagtcatcggctttattacctttgtgttggtagtgatgctattccgtccggcgcaacagttagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAAc                                                                                                                                                                                                                                      <  2:15003‑M2/13‑1 (MQ=255)
                                cgcttgcgaatgtggctttatccgtggctcacctggctagtcatcggctttattacctttgtgttggtagtgatgctagtccgtccggcgcaacagttagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATg                                                                                                                                                                                                               <  2:466121‑M2/36‑1 (MQ=255)
                                       gaatgtggctttatccgtggctcacctggctagtcatcggctttattacctttgtgttggtagtgatgctattccgtccggcgcaacagttagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctgggattgtggcaaaaaacacccgttcatactacgcgctgatcTGACGCAGGAAACGATGGCATACCACGAGCCGAAtgcgacgtt                                                                                                                                                                                                        >  2:248858‑M2/209‑247 (MQ=255)
                                                     ccgtggctcacctggctagtcatcggctttattacctttgtgttggtagtgatgctattccgtccggcgcaacagttagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGAt                                                                                                                                                                                           <  1:361574‑M2/56‑1 (MQ=255)
                                                              acctggctagtcatcggctttattacctttgtgttggtagtgatgctattccgtccggcgcaacagttagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTc                                                                                                                                                                                 >  1:368331‑M2/186‑251 (MQ=255)
                                                              acctggcgagtcagcggctttatttcctttgtgttggtagtgatgctattccgtccggcgcaacagttagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattttggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGTCGCAGTAAACGAAGGAGTACCACGCTCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTc                                                                                                                                                                                 <  2:147556‑M2/66‑1 (MQ=255)
                                                               cctggctagtcaccggctttatttcctttgtgttggtagtgatgctattccgtccggcgcaacagttagaagtgatctccaccggcttagtagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTCCGATAGCGCAGGTCg                                                                                                                                                                                <  2:240334‑M2/67‑1 (MQ=255)
                                                                     tagtcatcggctttattaactttgtgttggtagtgatgatattccgtccggcgcaacagttagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTTCCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTc                                                                                                                                                                           >  1:361913‑M2/179‑250 (MQ=255)
                                                                      agtcatcggctttattacctttgtgttggtagtgatgctattccgtccggcgcaacagttagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTc                                                                                                                                                                           >  1:107663‑M2/178‑249 (MQ=255)
                                                                      agtcatcggctttattacctttgtgttggtagtgatgctattccgtccggcgcaacagttagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTc                                                                                                                                                                           <  1:191549‑M2/72‑1 (MQ=255)
                                                                      agtcatcggctttattacctttgtgttggtagtgatgctattccgtccggcgcaacagttagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAg                                                                                                                                                                         <  1:353824‑M2/74‑1 (MQ=255)
                                                                                 ttattacctttgtgttggtagtgatgctattccgtccggcgcaacagttagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATaa                                                                                                                                                                 >  1:210066‑M2/167‑248 (MQ=255)
                                                                                   attacctttgtgttggtagtgatgctattccgtccggcgcaacagttagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCTCATTCAGTTCGATAAAGAcc                                                                                                                                                            <  1:146893‑M2/87‑1 (MQ=255)
                                                                                            gtgttggtagtgatgctattccgtccggcgcaacagttagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACAACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCg                                                                                                                                                   >  1:416949‑M2/156‑251 (MQ=255)
                                                                                                 ggtagtgatgctattccgtccggcgcaacagttagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGAc                                                                                                                                              >  1:371162‑M2/151‑251 (MQ=255)
                                                                                                     gtgatgctattccgtccggcgcaacagttagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCt                                                                                                                                          <  1:298615‑M2/105‑1 (MQ=255)
                                                                                                           ctattccgtccggcgcaacagttagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTg                                                                                                                                    >  1:123622‑M2/141‑251 (MQ=255)
                                                                                                             attccgtccggcgcaacagttagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGc                                                                                                                                   <  1:388469‑M2/112‑1 (MQ=255)
                                                                                                                  gtccggcgcaacagttagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggttttgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAAAGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCCGGCCGGTGACGCCTTTATTGCGACGc                                                                                                                              >  2:400193‑M2/134‑250 (MQ=255)
                                                                                                                     cggcgcaacagttagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggcgcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCAtgt                                                                                                                          <  1:319016‑M2/121‑1 (MQ=255)
                                                                                                                          caacagttagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctgggattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTAACACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGACGCATTCAGTTAGATAAAGACCGCCCGGCCGTTGACGCCTTTATTGcgacgcattagcggc                                                                                                                     >  2:328915‑M2/126‑244 (MQ=255)
                                                                                                                                 tagaagtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACa                                                                                                               <  1:364230‑M2/132‑1 (MQ=255)
                                                                                                                                      gtgatctccaccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGtgtg                                                                                                          >  1:63332‑M2/114‑250 (MQ=255)
                                                                                                                                              caccggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGt                                                                                                 <  1:351755‑M2/146‑1 (MQ=255)
                                                                                                                                               cccggcttatgagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTa                                                                                                <  2:351000‑M2/147‑1 (MQ=255)
                                                                                                                                                 cggcttattagcgatagggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGGGACCTTCCGTAGc                                                                                              >  1:462037‑M2/103‑251 (MQ=255)
                                                                                                                                                      tattagcgatagggattatctgtgccgggccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCcag                                                                                           <  2:408053‑M2/152‑1 (MQ=255)
                                                                                                                                                              atagggattatctgtaccgtgccaattatggctcgctggaaaaagctgggattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGAGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCAAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGCGTGACCTTCAGTAGCCAGCAGCAGCGcc                                                                                 >  1:291731‑M2/90‑251 (MQ=255)
                                                                                                                                                                aggtattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCt                                                                                <  1:425314‑M2/163‑1 (MQ=255)
                                                                                                                                                                agggattatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGCCGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTg                                                                               >  2:175001‑M2/88‑251 (MQ=255)
                                                                                                                                                                      tatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAActgg                                                                         >  1:75781‑M2/82‑251 (MQ=255)
                                                                                                                                                                      tatctgtaccgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAActg                                                                          <  1:104408‑M2/169‑1 (MQ=255)
                                                                                                                                                                             accgtgccaattatggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgcggatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTc                                                                   <  2:145203‑M2/176‑1 (MQ=255)
                                                                                                                                                                                  gccaattgaggctcgctggaaaaagtgggtattttggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAAGGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGa                                                              <  2:334425‑M2/181‑1 (MQ=255)
                                                                                                                                                                                  gccaattatggctcgctggaaaaagatggtattgtggcaaaaaacacccgttcataatacgcgatgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGAGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCCTTGACGACTTTATTGCGCCGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCCGCGACTGGACTGGCCGGTCAACGa                                                              >  2:132380‑M2/70‑250 (MQ=255)
                                                                                                                                                                                      attatggctcgctggaaaaagctggtattgtggcataaaacacccgttcatactccgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAACGCGATGCTTAACCTCTACGAACGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGAGCGTCCGAACAGTGCGACCTTCAGTAGCCCGCCGCCGCGCCTGAACTGGCTGGTCCACAAAGGtt                                                         >  2:309427‑M2/66‑251 (MQ=255)
                                                                                                                                                                                           ggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTa                                                                                                                                       >  2:243870‑M2/61‑168 (MQ=255)
                                                                                                                                                                                           ggctcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTa                                                                                                                                       <  1:243870‑M2/108‑1 (MQ=255)
                                                                                                                                                                                              tcgctggaaaaagctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGGAGGGTACTatgat                                                 >  2:436746‑M2/58‑251 (MQ=255)
                                                                                                                                                                                                           ctggtattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCATTATTGCGAAGCATGTGCGGCTGAACAGTGTGACGTTCAGTAGCCAGAAGCAGCGCCTGAACTGGCTGGTAAATGAAGGTTACTATGATGaaagcggtatt                                     >  1:163011‑M2/45‑245 (MQ=255)
                                                                                                                                                                                                               tattgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGGGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTGCTATGGTGAAAGCGTTCTTAATCg                                >  1:379014‑M2/41‑251 (MQ=255)
                                                                                                                                                                                                                attgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCCCGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCg                                <  2:10547‑M2/211‑1 (MQ=255)
                                                                                                                                                                                                                attgtggcaaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCg                                <  1:156284‑M2/211‑1 (MQ=255)
                                                                                                                                                                                                                  tgtggcaaaaaacacccgttcataatacgcgccgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGCTAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGACTTTATTGAGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCt                              >  1:263461‑M2/38‑250 (MQ=255)
                                                                                                                                                                                                                        aaaaaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTcg                       >  1:348084‑M2/32‑251 (MQ=255)
                                                                                                                                                                                                                          aaaacacccgttcataatacgcgctgatcTGACGCAGGCAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATCGCGCAGGTCGCATTCAGTTCGCTAAAGACCGCCAGGCCGTTGCCGCCTTTATTGCGCCGCATGTGCGTCCGCACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGCTTACTATGATGAAAGCGTTCTTAATCGCTACTCTcgcg                     >  2:460405‑M2/30‑251 (MQ=255)
                                                                                                                                                                                                                           aaacacccgttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTcgcg                     >  1:447364‑M2/29‑250 (MQ=255)
                                                                                                                                                                                                                                   gttcataatacgcgctgatcTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGTc             >  1:76039‑M2/21‑250 (MQ=255)
                                                                                                                                                                                                                                       ataatacgcgctgatcGGACGCTGGAAACGAGTGATTACCACGCGCTGAATGCTATGCTTACCCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTTCGACGCATGTGCGTCCGAACAGGGTGACCTTCAGTAGCCAGCAGCAGCGCTTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGTCATTAc        <  2:106764‑M2/235‑1 (MQ=255)
                                                                                                                                                                                                                                               cgctgatcTGAGGCAGGAAACGATGGATTNCCACGCGCTGAATGCGATTCTTAACCCCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGTCCGCCAGGCCGTTGATGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGTTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGACATTACGCTGtt  <  2:235321‑M2/241‑1 (MQ=255)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                
GGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCCGCGCCGGAGATGTGATTGCCCGGAAATGCGGCGTGCCGTGGCTGTACCGTTTTGAACTCATGGGTACGCAAAGCGATATCGAAAACGTTCGTAAAGGAGTAACCGAATTTTGGCAACGACAACCGCAGAATGCCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGTCATTACGCTGTT  >  NC_000913/2801126‑2801613

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: