| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,756,159 | Δ33,804 bp | [intA]–[glaH] | 28 genes [intA], yfjH, alpA, yfjI, yfjJ, abpB, abpA, yfjM, rnlA, rnlB, yfjP, yfjQ, yfjR, ypjK, yfjS, yfjT, yfjU, yfjW, yfjX, yfjY, ypjJ, yfjZ, ypjF, ypjA, ypjB, ypjC, ileY, [glaH] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2756159 | 2789962 | 33804 | 59 [0] | [0] 59 | [intA]–[glaH] | [intA],yfjH,alpA,yfjI,yfjJ,abpB,abpA,yfjM,rnlA,rnlB,yfjP,yfjQ,yfjR,ypjK,yfjS,yfjT,yfjU,yfjW,yfjX,yfjY,ypjJ,yfjZ,ypjF,ypjA,ypjB,ypjC,ileY,[glaH] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2756158 | 0 (0.000) | 59 (1.020) | 56/490 | 0.0 | 100% | intergenic (+203/‑1) | ssrA/intA | tmRNA/integrase IntA |
| ? | NC_000913 | 2789963 = | 0 (0.000) | intergenic (+1/‑19) | glaH/lhgD | glutarate dioxygenase GlaH/L‑2‑hydroxyglutarate dehydrogenase | |||||
AGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGA > NC_000913/2755915‑2756388 | aGGAATTTCGGGCGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaa < 1:50087‑M1/250‑7 (MQ=255) gACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGAGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagg > 2:314262‑M1/1‑234 (MQ=255) gcgGGTTCAACTACCCACAGCTCCACCAACATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGCCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGCAGTCCGAAGAGAACTAATTAAATCCGCACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCCATTGTTTACGTTGGGCCTAAACGCAGGG‑GACCCCCCCgcgcaagggaattgggcggg > 2:459424‑M1/1‑231 (MQ=255) gtttcaccgcccgccagctccACCAAAATTCTCCATCGGTGATGACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATGAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCGCTAGTGTTTACGTTGGGCCTAAACGCAGGGAGA‑GTCCCCgcgcaaaggaattgagcggatgt < 2:180074‑M1/242‑24 (MQ=255) cAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatg > 2:327719‑M1/1‑224 (MQ=255) aaCTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgat > 1:344688‑M1/1‑223 (MQ=255) aCTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgatt < 1:47692‑M1/251‑30 (MQ=255) cGCCAGCTCCACCACAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCATAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCACGCGACGTCCGAAGAGAACTAATTAAATCCGCACCTTTTAGGCCAATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGCGA‑CTCCCCgcgcaaaggaattgaggggatgtatgattttgtg > 2:60563‑M1/1‑217 (MQ=255) tCCACCAAAATTATCCATCGGTGATTACCCGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAACGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattg > 2:454993‑M1/1‑210 (MQ=255) ccaccaAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGACCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CT‑CCCgcgccaaggaattgagcggatgtatgattttgtgattattggc > 1:349764‑M1/1‑208 (MQ=255) aaaTTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACTGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCGCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑ATCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcgg < 1:339802‑M1/251‑49 (MQ=255) aaTTCTCCATCGGTGATTACCAGATTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgagtttgtgattattggcggcggc < 1:26030‑M1/251‑50 (MQ=255) ccATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAGCCTTTTAGTCCCAATGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattactggcggcggcatc < 2:376427‑M1/248‑53 (MQ=255) ccATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatca < 1:18156‑M1/249‑54 (MQ=255) aTCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcgg > 1:161157‑M1/1‑194 (MQ=255) tGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGTGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattagcggcggcatcatcggcatgt > 1:284915‑M1/1‑189 (MQ=255) gATTACCAGAGTCATCCGATGAAGGCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtc < 2:310484‑M1/251‑64 (MQ=255) aCCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgac < 1:273599‑M1/250‑67 (MQ=255) gTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccccca > 2:405168‑M1/1‑178 (MQ=255) cATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgccaaggaattgagcggatgtatgattttgtgattattggcngcggcagcatcggcatgtcgaccgccatgcc > 2:234330‑M1/1‑176 (MQ=255) cGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactg < 2:21323‑M1/251‑80 (MQ=255) gAAGTCCTCAGAGCCAGCACGGCGCAAGCCCTGCGGGATTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGCAGAGAACTAATTAATTCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCAATTGTTTACGTTGGGCCTAACAGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgggattattagcggcgccatcatcggcatgtcgaccgccaggcaaccgactg > 2:36209‑M1/1‑168 (MQ=255) gAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccaggcaactgattg > 1:160340‑M1/1‑168 (MQ=255) gCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccgg < 2:55194‑M1/251‑96 (MQ=255) ggCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcc < 1:188867‑M1/248‑101 (MQ=255) ggCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcc > 2:188867‑M1/1‑148 (MQ=255) gggCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctgg > 1:341752‑M1/1‑134 (MQ=255) ggCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaa < 1:117274‑M1/251‑119 (MQ=255) cTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaa > 1:452559‑M1/1‑131 (MQ=255) cccGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggaatcatcggaatgtcgaccgccatgcaaatggttggtgtctatccgggcgcccgccttgcgttggtggcaaaagagtacgccccggcctggacc > 2:416737‑M1/1‑109 (MQ=255) gcgAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTCATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCCGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattgtgtgattattggcggcggcatcatcggcctgtcgaccgccatgcaactgtttgatgtctatcctgacgcccgcatttcgttgcttgaaaaagcggccgccccggcctggtcccc > 2:160899‑M1/1‑106 (MQ=255) gAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTAGTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgaggtctagccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccac < 2:108412‑M1/251‑155 (MQ=255) agaACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggctgtatgattttgtgattattggcggcggcatcataggcatgtcgaccgccatgcaactgatttatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcacccgacgggccacaac > 2:465168‑M1/1‑93 (MQ=255) aaCTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcacccgacgggccacaacagc > 2:52533‑M1/1‑91 (MQ=255) aaTTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcg > 1:453642‑M1/1‑87 (MQ=255) aaaTCCGACCCTTTAAGGCCCATTGATAGGCCCAACGAAAAGCTCTATGTTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattatgggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcatggcgtggctggaaaaagagtccgccccggcctgtccccagacgggccacaacagcggcgtgat < 2:190343‑M1/251‑169 (MQ=255) tttAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggg > 1:356590‑M1/1‑71 (MQ=255) tttAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaaccgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaaca > 2:98773‑M1/1‑71 (MQ=255) tttAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaaccgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaaca < 1:98773‑M1/229‑159 (MQ=255) tttAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcaacatcggcatgtcgaccgccctgcaactgattgatgtctatccggacgcccgcattgcgctgctggaacaaaagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgcaggggt > 1:260925‑M1/1‑71 (MQ=255) ttAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggctgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtc > 1:358055‑M1/1‑70 (MQ=255) tAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgcccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtccccagacgggccacaacagcggcgtgatccatgccggggtc < 1:288339‑M1/250‑182 (MQ=255) ggCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgcttttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgatggatttctatccggacgcccgcattgggttgctggaaacagagtccgcccccgcctgccaccagacaggccacaacagcggcggcacccattccgcgggcttt > 2:337917‑M1/1‑67 (MQ=255) ccATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatttctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcccgtccccagccgggccacaaccgccgcggggtccaggccgggggcgtttcc > 2:405520‑M1/1‑64 (MQ=255) cATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattaca < 1:247314‑M1/251‑189 (MQ=255) aTAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggcaaaagagtccgccccggcctgtcaccagacgggccacaacagcgncgtgatccatgccggggtctattacacgtcc > 2:211239‑M1/1‑58 (MQ=255) ccAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagc < 1:120763‑M1/251‑200 (MQ=255) cAACGAAAAGCTCTATTGCTTACGTTGGGCCTAAAAGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgccactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccagcctgtcaccagacgggccacaacagcggcgggctccaagccggggtctattacacgtccggcagcc > 2:138704‑M1/1‑51 (MQ=255) gAAAGGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtccccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccg < 2:340345‑M1/241‑195 (MQ=255) gAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccg > 1:340345‑M1/1‑47 (MQ=255) aaaaagCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaa < 1:211239‑M1/250‑205 (MQ=255) ctctATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaaaagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgaccggcagcctgaaggcgc > 1:246240‑M1/1‑41 (MQ=255) ctATTGTTTACTTTGGGCCTAAACGCAGGGAGT‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtccccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgca < 1:459424‑M1/249‑211 (MQ=255) gTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgc > 1:28063‑M1/1‑34 (MQ=255) tACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccgggggctattacacgtccggcagcctgaaggcgcagttttgcctg > 1:110824‑M1/1‑31 (MQ=255) cGTTGGGCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgatcattggcggcggcatcatcggcatgtcgaccgccctgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagaacggccacaacagcggcgggatccatggcggggtcgattacccgtccggcagcctggaggggcaggtttgcccggc > 2:299381‑M1/1‑29 (MQ=255) gggCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatcactgacgggggctattacacgtccggcagcctgaaagagcggttttgcctggcggg > 1:108933‑M1/1‑25 (MQ=255) gCCTAAACGCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgggaa > 1:179209‑M1/1‑23 (MQ=255) caaaacgCAGGGAGA‑CTCCCCgcgcaaaggaattgagcggatgtttgtttttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgcgggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgggaaacc < 1:236322‑M1/249‑231 (MQ=255) | AGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGA‑CTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGA > NC_000913/2755915‑2756388 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |