Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,993,664 Δ31,548 bp [uvrC][yodD] 40 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1993664 2025211 31548 40 [0] [0] 38 [uvrC]–[yodD] [uvrC],uvrY,yecU,yecF,sdiA,sdsN,tcyN,tcyL,dcyD,tcyJ,fliZ,fliA,fliX,fliC,fliD,fliS,fliT,amyA,yedD,yedE,yedF,yedK,yedL,fliE,fliF,fliG,fliH,fliI,fliJ,fliK,fliL,fliM,fliN,fliO,fliP,fliQ,fliR,rcsA,dsrB,[yodD]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 19936630 (0.000)38 (0.660) 36/490 0.3 100% coding (1044/1833 nt) uvrC UvrABC excision nuclease subunit C
?NC_000913 2025212 = 0 (0.000)coding (227/228 nt) yodD stress‑induced protein

GTAATGTTATAGCGCCGATACTCCGCACGCAGCGGGCCGTTAGCATCAAACACCACACAGGAAGCGACGGTTTGTTCGCCCATGGTATGGCTGATGTCAAAGCACTCCATCCGCTTCACTTCCGGCAATTTCAACACGCTGGCAAGCGCGGTCAGTCGCTGGTGAACGGTAGATTGCTGCGAAAGTTTGCTGGTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGCGAGGTTTGGTTTGAACATTAATCTTGCGTCCCGCCAGTTCTGAAAGGGAATCGGCGAGCAGCGTTTTATCGCTAAGATTAAAATCGAGCAGGATCTCACCCGGTAAGGTGCGCATCTGGCTGCCTTGTAAATAGAACTGGCCTACGAAGGTTTCTACCACCTCGCTCAGTTCCGTACCGCCAGGCACTTTCGGGAAATAGCTGCGGCTGCCGAGCACTTTGCCCTGACGAATGAACAATACGTGG  >  NC_000913/1993415‑1993909
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                      
gTAATGTTATAGCGCCGATACTCCGCACGCAGCGGGCCGTTAGCATCAAACACCACACAGGAAGCGACGGTTTGTTCGCCCATGGTATGGCTGATGTCAAAGCACTCCATCCGCTTCACTTCCGGCAATTTCAACACGCTGGCAAGCGCGGTCAGTCGCTGGTGAACGGTAGATTGCTGCGAAAGTTTGCTGGTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATcgccg                                                                                                                                                                                                                                                        <  1:277527/249‑1 (MQ=255)
gTAATGTTATAGCGCCGATACTCCGCACGCAGCGGGCCGTTAGCATCAAACACCACACAGGAAGCGACGGTTTGTTCGCCCATGGTATGGCTGATGTCAAAGCACTCCATCCGCTTCACTTCCGGCAATTTCAACACGCTGGCAAGCGCGGTCAGTCGCTGGTGAACGGTAGATTGCTGCGAAAGTTTGCTGGTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATcgccg                                                                                                                                                                                                                                                        <  1:303809/249‑1 (MQ=255)
        ataGCGCCGATACCCCGCACGCAGCGGGCCGTTAGCATCAAACACCACACAGGAAGCGTCGGTTTGTTCGCCCATGGTATGGCTGATGTCAAAGCACTCCATCCGCTTCACTTCCGGCAATTTCAACTCGCTGGCAAGCGCGGTCAGTCGCTGGTGAACGGTAGATTGCTGCGAAAGTTTGCTGGTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaa                                                                                                                                                                                                                                              <  2:436909‑M1/251‑11 (MQ=255)
          agagccgaTACTCCGCACGCAGCGGGCCGTTNGCATCAATCGCCACACTGTAATCGACGGTTTGTTCGCCCATGGTATGGCTGATGTTAAAGCACTCCTTCCGCGTCACTTCCGGCAATTTCAACGCGCGGGCAAGCGCGGTCAGTCGCTGGTGAACGGTAGATTGCTGCTAAAGTTTGCTGGTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGAGTACGCGCCCTATCGCCGgaatgcacaata                                                                                                                                                                                                                                            <  2:219400‑M1/248‑13 (MQ=255)
            cgcCGATACTCCGCACGCAGCGGGCCGTTAGCATCAAACACCACACAGGACGCGACGGTTTGTTCGCCCATGGTATGGCTGATGTCAAAGCACTCCATCCGCTTCACTTCCGGCAATTTCAACACGCTGGCAAGCGCGGTCAGTCGCTGGTGACCGGTAGATTGCTGCGAAAGTTTGCTGGTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaataa                                                                                                                                                                                                                                           >  1:270766‑M1/1‑237 (MQ=255)
              ccGATACTCCGCACGCAGCGGGCCGTTAGCATCAAACACCACACAGGAAGCGACGGTTTGTTCGCCCATGGTATGGCTGATGTCAAAGCACTCCATCCGCTTCACTTCCGGCAATTTCAACACGCTGGCAAGCGCGGTCAGTCGCTGGTGAACGGTAGATTGCTGCGAAAGTTTGCTGGTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaataaaa                                                                                                                                                                                                                                         >  2:334867‑M1/1‑235 (MQ=255)
                        gcacgcaGCGGGCCGTTAGCATCAAACACCACACAGGAAGCGACGGTTTGTTCGCCCATGGTATGGCTGATGTCAAAGCACTCCATCCGCTTCACTTCCGGCAATTTCAACACGCTGGCAAGCGCGGTCAGTCGCTGGTGAACGGTAGATTGCTGCGAAAGTTTGCTGGTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaataaaaaaatcccgacc                                                                                                                                                                                                                              >  1:36639‑M1/1‑225 (MQ=255)
                                cGGGCCGTTAGCATCAAACACCACACAGGAAGCGACGGTTTGTTCGCCCATGGTATGGCTGATGTCAAAGCACTCCATCCGCTTCACTTCCGGCAATTTCAACACGCTGGCAAGCGCGGTCCGTAGCTGGTGCACGTTAGATTGCTGCGAAAGTTTGCTGGTTAAGGCCGTCGCCGCATTGGTTCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGggatgcccaatacacaaatcccgcccatgagggg                                                                                                                                                                                                                      >  2:3480‑M1/1‑217 (MQ=255)
                                   gCCGTTAGCATCAAACACCACACAGGAAGCGACGGTTTGTTCGCCCATGGTATGGCTGATGTCAAAGCACTCCATCCGCTTCACTTCCGGCAATTTCAACACGCTGGCAAGCGCGGTCAGTCGCTGGTGAACGGTAGATTGCTGCGAAAGCTTGCTGGTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaataaaaaaatcccgaccctgagggggtc                                                                                                                                                                                                                   >  1:98720‑M1/1‑214 (MQ=255)
                                    ccGTTAGCATCAAACACCACACAGGAAGCGACGGTTTGTTCGCCCAGGGTATGGCTGATGTCAAAGCACTCCATCCGCTTCACTTCCGGCAATTTCAACACGCTGGCAAGCGCGGTCAGTCGCTGGTGAACGTTATATTGCTGCGAAAGTTTGCTGGTTAAGGCCGTCGCCGCATTTGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCTgaatgcacaataaaaaaatcccgaccctgagggggtcg                                                                                                                                                                                                                  <  1:175224‑M1/251‑39 (MQ=255)
                                              cAAACACCACACAGGAAGCGACGGTTTGTTCGCCCATGGTATGGCTGATGTCAAAGCACTCCATCCGCTTCACTTCCGGCAATTTCAACACGCTGGCAAGCGCGGTCAGTCGCTGGTGAACGGTAGATTGCTGCGAAAGTTTGCTGGTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaataaaaaaatcccgaccctgagggggtcgggatgaaac                                                                                                                                                                                                         <  2:359741‑M1/250‑48 (MQ=255)
                                                             aaGCGACGGTTTGTTCGCCCATGGTATGGCTGATGTCAAAGCACTCCATCCGCTTCACTTCCGGCAATTTCAACACGCTGGCAAGCGCGGTCAGTCGCTGGTGAACGGTAGATTGCTGCGAAAGTTTGCTGGTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaatcaaaaaatcccgaccctgagggggtcgggatgaaacttgcttaagcaaga                                                                                                                                                                                           >  2:360149‑M1/1‑188 (MQ=255)
                                                                   cGGTTTGTTCGCCCATGGTATGGCTGATGTCAAAGCACTCCATCCGCTTCACTTCCGGCAATTTCAACACGCTGGCAAGCGCGGTCAGTCGCTGGTGAACGGTAGATTGCTGCGAAAGTTTGCTGGTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaataaaaaaatcccgaccctgagggggtcgggatgaaacttgcttaagcaagaagcactt                                                                                                                                                                                    >  2:415732‑M1/1‑182 (MQ=255)
                                                                            cGCCCATGGTATGGCTGATGTCAAAGCACGCCATCCGCTTCACTTCCGGCAATTGCAACACGCTGGCAAGCGCGGTCAGTCGCTGGTGAACGGTAGATTGCTGCGAAAGTTTGCTGGTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaataaaaaaatcccgaccctgagggggtcgggatgaaacttgcttaagcaagaagcacttaaaaaattc                                                                                                                                                                           <  2:153811‑M1/250‑78 (MQ=255)
                                                                                 aTGGTATGGCTGATGTCAAAGCACTCCATCCGCTTCACTTCCGGCAATTTCAACACGCTGGCAAGCGCGGTCAGTCGCTGGTGAACGGTAGATTGCTGCGAAAGTTTGCTGGTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaataaaaaaatcccgaccctgagggggtcgggatgaaacttgcttaagcaagaagcacttaaaaaattcgttac                                                                                                                                                                      >  1:145610‑M1/1‑168 (MQ=255)
                                                                                            gATGGCAAAGAACTCCATCCGCTTCACTTCCGGCAATTTCAACACGCTGGCAAGCGCGGTCAGTCGCTGGTGAACGGTAGAGTGCTGCGAAAGTTTGCTGTTTAAGGCCGTCGCCGCATTGGTACGCGCGATTTTCAGATAACGCGCCCTATCGCCGgaatgcacaataaaaaaatcccgaccctgagggggtcgggatgaaacttgcttaagcaagaagcacttagaaaattcgtgacaccatgaaatct                                                                                                                                                          <  2:401423‑M1/251‑95 (MQ=255)
                                                                                                  aaaGCACTCCATCCGCTTCACTTCCGGCAATTTCAACACGCTGGCAAGCGCGGTCAGTCGCTGGTGAACGGTAGATTGCTGCGAAAGTTTGCTGGTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaataaaaaaatcccgaccctgagggggtcgggatgaaacttgcttaagcaagaagcacttaaaaaattcgttacaccaggaaatctgatgtg                                                                                                                                                    >  2:252610‑M1/1‑151 (MQ=255)
                                                                                                       aCTCCATCCGCTTCACTTCCGGCAATTTCAACACGCTGGCAAGCGCGGTCAGTCGCTGGTGAACGGTAGATTGCTGCGAAAGTTTGCTGGTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaataaaaaaatcccgaccctgagggggtcgggatgaaacttgcttaagcaagaagcacttaaaaaattcgttacaccaggaaatctgatgtgttcat                                                                                                                                               >  2:420361‑M1/1‑146 (MQ=255)
                                                                                                          ccATCCGCTTCACTTCCGGCAATTTCAACACGCTGGCAAGCGCGGTCAGTCGCTGGTGAACGGTAGATTGCTGCGAAAGTTTGCTGGTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaataaaaaaatcccgaccctgagggggtcgggatgaaacttgcttaagcaagaagcacttaaaaaattcgttacaccaggaaatctgatgtgttcatcac                                                                                                                                            <  1:232620‑M1/251‑109 (MQ=255)
                                                                                                                gCTTCACTTCCGGCAATTTCAACACGCTGGCAAGCGCGGTCAGTCGCTGGTGAACGGTAGATTGCTGCGAAAGTTTGCTGGTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaataaaaaaatcccgaccctgagggggtcgggatgaaacttgcttaagcaagaagcacttaaaaaattcgttacaccaggaaatctgatgtgttcatcaccttatc                                                                                                                                      >  1:387348‑M1/1‑137 (MQ=255)
                                                                                                                  ttCACTTCCGGCAATTTCAACACGCTGGCAAGCGCGGTCAGTCGCTGGTGAACGGTAGATTGCTGCGAAAGTTTGCTGGTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaataaaaaaatccagaccctgagggggtcgggatgaaacttgcttaagcaagaagcacttaaaaaattcgttacaccaggaaatctgatgtgttcatcaccttatccg                                                                                                                                    >  1:398338‑M1/1‑135 (MQ=255)
                                                                                                                   tCACTTCCGGCAATTTCAACACGCGGGCAATCGCGGTCAGTCGCTGGTGAACGGAAGATTGCTGCGAAAGTTTGCTGGTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaataaaaaaatcccgaccctgagggggtcgggatgaaacttgcttaagcaagaagcacttaaaaaatgcgttacaccaggaaatctgatgtgttcatcaccttatcc                                                                                                                                     <  1:256461‑M1/249‑116 (MQ=255)
                                                                                                                    cACTTCCGGCAATTTCAACACGCTGGCAAGCGCGGTCAGTCGCTGGTGAACGGTAGATTGCTGCGAAAGTTTGCTGGTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaataaaaaaatcccgaccctgagggggtcgggatgaaacttgcttaagcaagaagcacttaaaaaattcgttacaccaggaaatctgatgtgttcatcaccttatccgc                                                                                                                                   <  2:454997‑M1/250‑118 (MQ=255)
                                                                                                                                   cAACACGCTGGCAAGCGCGGTCAGTCGCTGGTGAACGGTAGAGTGCTGCGAAAGTTTGCTGGATAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaataaaaaaatcccgaccctgagggggtcgggatgaaacttgcttaagcaagaagcacttaaaaaattcgttacaccaggaaatctgatgtgttcatcaccttatccgcaatttttttcgctgac                                                                                                                   <  2:51338‑M1/251‑134 (MQ=255)
                                                                                                                                      cacGCTGGCAAGCGCGGTCAGTCGCTGGTGAACGGTAGATTGCTGCGAAAGTTTGCTGGTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaataaaaaaatcccgaccctgagggggtcgggatgaaacttgcttaagcaagaagcacttaaaaaattcgttacaccaggaaatctgatgtgttcatcaccttatccgcaatttttttcgctgacaag                                                                                                                <  1:366742‑M1/251‑137 (MQ=255)
                                                                                                                                            ggCAAGCTCGGTCAGTCGCTGGTGAACGGTATATTGCTGCGAAAGTTTTCTGGTTAAGGTCGTCGCCGCATTGGTGCTCGCGCGTTTCAGATAACGCGCCCTAGCGCCGgaatgcacaataaaaaaaacccgaccctgagggggtcgggatgaaacttgcttaagcaagaagcacttaaaaaattcgttacaccaggaaatctgatgtgttcatcaccttatccgcaatttatttcgctgacaagaaaa                                                                                                            <  2:332299‑M1/249‑141 (MQ=255)
                                                                                                                                            ggCAAGCGCTGTCAGTCGCTGGGGAACGGTAGATTGCTGCGAAAGTTTGCTGGTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTAGCGCCGgaatgcacaataaaaaaatcccgaccctgaggtggtcgggatgaaacttgcttaagcaagaagcacttaaaaaattcgttactccaggaaatctgatgtgttcagcaccttagccgcaatttttatcgctgacaagaaaat                                                                                                           <  2:176363‑M1/250‑142 (MQ=255)
                                                                                                                                                aGCGCGGTCAGTCGCTGGTGAACGGTAGATTGCTGCGAAAGTTTGCTGGTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaataaaaaaatcccgaccctgagggggtcgggatgaaacttgcttaagcaagaagcacttaaaaaattcgttacaccaggaaatctgatgtgttcatcaccttatccgcaatttttttcgctgacaagaaaatattcg                                                                                                      >  1:385543‑M1/1‑105 (MQ=255)
                                                                                                                                                         aGTCGCTGGTGAACGGTAGATTGCTGCGAAAGTTTGATGGTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaataaaaaaatcccgaccctgagggggtcgggatgaaacttgcttaagcaagaagcacttaaaaaattcgttacaccaggaaatctgatgtgttcatcaccttatccgcaatttttttcgctgacaagaaaatattcgccatatga                                                                                              >  1:141635‑M1/1‑96 (MQ=255)
                                                                                                                                                                 gTGAACGGTAGATTGCTGCGAAAGTTTGCTGGTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaataaaaaaatcccgaccctgagggggtcgggatgaaacttgcttaagcaagaagcacttaaaaaattcgttacaccaggaaatctgatgtgttcatcaccttatccgcaatttttttcgctgacaagaaaatattcgccatatgaatgattaac                                                                                     >  2:342241‑M1/1‑88 (MQ=255)
                                                                                                                                                                        gTAGATTGCTGCGAAAGTTTGCTGGTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaataaaaaaatcccgaccctgagggggtcgggatgaaacttgcttaagcaagaagcacttaaaaaattcgttacaccaggaaatctgatgtgttcatcaccttatccgcaatttttttcgctgacaagaaaatattcgccatatgaatgattaacgctactt                                                                              >  1:53284‑M1/1‑81 (MQ=255)
                                                                                                                                                                                     aaaGTTTGCTGGTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaataaaaaaatcccgaccctgagggggtcgggatgaaacttgcttaagcaagaagcacttaaaaaattcgttacaccaggaaatctgatgtgttcatcaccttatccgcaatttttttcgctgacaagaaaatattcgccatatgaatgattaacgctacttatgaatagaaatg                                                                 >  2:351092‑M1/1‑68 (MQ=255)
                                                                                                                                                                                                      gCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaataaaaaaatcccgaccctgagggggtcgggatgaaacttgcttaagcaagaagcacttaacaaattcgttacaccaggagatctgatgtgttcatcaccttatccgcaatttttttcgctgacaagaaaatattcgccatatgaatgattaacgctacttatgaatagaaatgtgacgcacgtcacccct                                                >  1:287798‑M1/1‑51 (MQ=255)
                                                                                                                                                                                                      gCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaataaaaaaatcccgaccctgagggggtcgggatgaaacttgcttaagcaagaagcacttaaaaaattcgttacaccaggaaatctgatgtgttcatcaccttatccgcaatttttttcgctgacaagaaaatattcgccatatgaatgattaacgctacttatgaatagaaatgtgacgcacgtcacccct                                                >  1:289877‑M1/1‑51 (MQ=255)
                                                                                                                                                                                                      gCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaataaaaaaatcccgaccctgagggggtcgggatgaaacttgcttaagcaagaagcacttaaaaaattcgttacaccaggaaatctgatgtgttcatcaccttatccgcaatttttttcgctgacaagaaaatattcgccatatgaatgattaacgctacttatgaatagaaatgtgacgcacgtcacacct                                                >  2:66456‑M1/1‑51 (MQ=255)
                                                                                                                                                                                                         gTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaataaaaaaatcccgaccctgagggggtcgggatgaaacttgcttaagcaagaag                                                                                                                                                                                         <  1:235995‑M1/111‑64 (MQ=255)
                                                                                                                                                                                                         gTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaataaaaaaatcccgaccctgagggggtcgggatgaaacttgcttaagcaagaag                                                                                                                                                                                         >  2:235995‑M1/1‑48 (MQ=255)
                                                                                                                                                                                                                    ggTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGgaatgcacaataaaaaaatcccgaccctgagggggtcgggatgaaacttgcttaagcaagaagcacttaaaaaattcgttacaccaggaaatctgatgtgttcatcagcttatccgcaatttttttcgctgacaagaaaatattcgccatatgaatgattaacgctacttatgaatagaaatgtgacgcacgtcaccccttggtggctctggcg                                  >  1:346568‑M1/1‑37 (MQ=255)
                                                                                                                                                                                                                             gAGTTTCAGATAACGCGCCCTATCGCCGgaatgctcaataaaaaaatcccgaccctgagggggtcgggatgaaacttgcttaagcaagaagcacttaaaaaattcgttacaccaggaaatctgatgtgttcatcaccttatccgcaatttttttcgctgacaagaaaatattcgccatatgaatgattaacgctacttatgaatagaaatgtgacgcacgtcaccccttggtgtctctggcgtcagcggga                         <  1:317091‑M1/251‑224 (MQ=255)
                                                                                                                                                                                                                                                    cGCCGgaatgcacaataaaaaaatcccgaccctgagggggtcgggatgaaacttgcttaagcaagaagcacttaaaaaattcgttacaccaggaaatctgatgtgttcatcaccttatccgcaatttttttcgctgacaagaaaatattcgccatatgaatgattaacgctacttatgaatagaaatgtgacgcacgtcaccccttggtggctctggcgtcagcgggatcgctcccgaacaaatcatcttt  >  2:342953‑M1/1‑5 (MQ=255)
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                      
GTAATGTTATAGCGCCGATACTCCGCACGCAGCGGGCCGTTAGCATCAAACACCACACAGGAAGCGACGGTTTGTTCGCCCATGGTATGGCTGATGTCAAAGCACTCCATCCGCTTCACTTCCGGCAATTTCAACACGCTGGCAAGCGCGGTCAGTCGCTGGTGAACGGTAGATTGCTGCGAAAGTTTGCTGGTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGCGAGGTTTGGTTTGAACATTAATCTTGCGTCCCGCCAGTTCTGAAAGGGAATCGGCGAGCAGCGTTTTATCGCTAAGATTAAAATCGAGCAGGATCTCACCCGGTAAGGTGCGCATCTGGCTGCCTTGTAAATAGAACTGGCCTACGAAGGTTTCTACCACCTCGCTCAGTTCCGTACCGCCAGGCACTTTCGGGAAATAGCTGCGGCTGCCGAGCACTTTGCCCTGACGAATGAACAATACGTGG  >  NC_000913/1993415‑1993909

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: