Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 244,301 Δ9,446 bp yafJyafP yafJ, dpaA, yafQ, dinJ, yafL, rayT, dinB, yafN, yafO, yafP

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 244301 253746 9446 68 [0] [0] 68 yafJ–yafP yafJ,dpaA,yafQ,dinJ,yafL,rayT,dinB,yafN,yafO,yafP

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2443000 (0.000)68 (1.190) 64/488 0.0 100% intergenic (+179/‑27) gmhA/yafJ D‑sedoheptulose 7‑phosphate isomerase/putative glutamine amidotransferase YafJ
?NC_000913 253747 = 0 (0.000)intergenic (+586/+512) yafP/pepD putative N‑acetyltransferase YafP/peptidase D

ATTCAGGAGATTCACATTAAAGTGATCCATATCCTGATCCAGTTGATTGAAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGCGCTCCCGCTGTTGTGGAGGTTACCCATGTGCGAATTGCTCGGGATGAGCGCCAACGTCCCTACCGATATCTGCTTTAGTTTCACCGGGCTTGTACAGCGTGGTGGTGGAACCGGGCCACATAAAGATGGCTGGGGCATTACCTTTTACGAAGGTAAAGGCTGTCGCACATTTAAAGATCCACAACCCAGCTTTAATTCCCCCATCGCCAAACTTGTCCAGGACTACCCGATAAAATC  >  NC_000913/244053‑244538
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                              
aTTCAGGAGATTCAAATTAAAGTGATCCATATCCGGATCCAGTTGATTGAAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCTTGTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAAAGCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTGAAATCAATCTTCGCCGGGGGCCATGgcg                                                                                                                                                                                                                                             <  2:431132‑M1/251‑4 (MQ=255)
       agaTTCACATTAAAGTGTTCCATATCCTGATCCAGTTGATTGAAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAGATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATGCGACCTGAAAATTCTTAAANAAATCTTCGCCGGGGGCTATGgcgctggtat                                                                                                                                                                                                                                      >  2:207145‑M1/1‑241 (MQ=255)
               aTTAAAGTGATCCATATCCTGATCCAGTTGATTGAAAAAGAGATGGTTAAGTAAGTCGGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCTTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgat                                                                                                                                                                                                                              <  1:111548‑M1/251‑19 (MQ=255)
                ttAAGGTGATCCATATCCTGATCAAGTTGGTTGAAAAAGAGATGGTTAAGTAAGTCTGGCGTATGCCGGATAAGACGTTTACTCCGCATCCGACATTTATGAGCTGATGCCTGATGCGACGCTGCCGCGGCTTATCGTGCCTACAAATCTGTACGCGAACCGGAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCGTAAATCAGTCTGCGCCGGGGGCCATGgcgcttggttctctcgatg                                                                                                                                                                                                                             >  1:196356‑M1/1‑232 (MQ=255)
                 tAAAGTGATCCATATCCTGATCCAGTTGATTGAAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatg                                                                                                                                                                                                                             <  1:198065‑M1/250‑20 (MQ=255)
                   aaGTGATCCATATCCTGATCCAGTTGATTGAAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAACATTCTTAAATCAATCTTCCCCGGGGGCCATGgcgctggtttctctcgatggcg                                                                                                                                                                                                                          >  2:191162‑M1/1‑229 (MQ=255)
                    aGTGATCCATATCCTGATCCAGTTGATTGAAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAACATTCTTAAATCAATCTTCGCCGTGGGCCATGgcgctggtttctctcgatggcg                                                                                                                                                                                                                          >  1:225957‑M1/1‑228 (MQ=255)
                                 cTGATCCAGTTGATTGAAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGGCCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggc                                                                                                                                                                                                             >  1:121694‑M1/1‑215 (MQ=255)
                                      ccAGTTGATTGAAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaag                                                                                                                                                                                                       <  1:318391‑M1/251‑42 (MQ=255)
                                                gaAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctgg                                                                                                                                                                                             <  1:372510‑M1/251‑52 (MQ=255)
                                                 aaaaaGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggg                                                                                                                                                                                            >  1:10700‑M1/1‑199 (MQ=255)
                                                  aaaaGAGATGGTTAAGTAAGTCTGGCTTAGGCCGAATAAGTCGTTTACGCCGAATCCGGCATTGGTTCGCTGATGCCTGATGCGACGCTGACGCTTCTTATCATGCCTCCAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcattggcattaagcgaaagctggtg                                                                                                                                                                                           <  2:275428‑M1/251‑54 (MQ=255)
                                                    aaGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtg                                                                                                                                                                                         >  2:7375‑M1/1‑196 (MQ=255)
                                                      gagaTGGTTAAGTAAGTTTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggc                                                                                                                                                                                       <  2:465707‑M1/251‑58 (MQ=255)
                                                        gaTGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcac                                                                                                                                                                                     <  1:198195‑M1/251‑60 (MQ=255)
                                                         atgtttaattaagtctGGCGTAGTCCGGATAATCCTTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCTACCTGAAAATTCTTAAATCAATCTGCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcact                                                                                                                                                                                    <  1:241413‑M1/247‑61 (MQ=255)
                                                           gggtaattaagtgtggcgtAGGCCGGAGAAGACGTGTCCGCCGCAGCCTGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggttgctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactat                                                                                                                                                                                  <  2:432879‑M1/244‑63 (MQ=255)
                                                                 gtaagtCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtg                                                                                                                                                                            >  1:246322‑M1/1‑183 (MQ=255)
                                                                      tCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAACTTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgctggcgttaacgcatgggccttaagcgaaagctggtgtggcagtatgcagtggattt                                                                                                                                                                       >  2:132782‑M1/1‑178 (MQ=255)
                                                                          gCGTAGGCCGGATAAGACGGTTACGCCGAATCCGGCATTTGTGCGCTTATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAAATCTGTACGCGAACCGTAGGGCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtcc                                                                                                                                                                   <  2:113066‑M1/251‑78 (MQ=255)
                                                                                    gATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtat                                                                                                                                                         <  1:304708‑M1/251‑88 (MQ=255)
                                                                                    gATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctc                                                                                                                                                                                                                                   >  2:463750‑M1/1‑164 (MQ=255)
                                                                                    gATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctc                                                                                                                                                                                                                                   <  1:463750‑M1/177‑14 (MQ=255)
                                                                                       aaGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcgg                                                                                                                                                      <  1:292931‑M1/251‑91 (MQ=255)
                                                                                                     gcATCCGGCATTTGGGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGCCCTGAACATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgatagcgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcg                                                                                                                                        >  1:219941‑M1/1‑147 (MQ=255)
                                                                                                       aTCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgc                                                                                                                                       >  1:162175‑M1/1‑145 (MQ=255)
                                                                                                                  gtgCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtt                                                                                                                            <  1:107433‑M1/250‑117 (MQ=255)
                                                                                                                  gggggcggagtccgtatggtacgctgactcgtcttaacaggCCTACAAAGCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTGCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcagtaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggttt                                                                                                                           <  2:162031‑M1/231‑118 (MQ=255)
                                                                                                                      gtcgccgccggatgcgacgctgacgCGTCTTATCATGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgg                                                                                                                       <  1:451896‑M1/241‑122 (MQ=255)
                                                                                                                         gatgcctgcttcggtgctgacgcgtcttatcATGCCTTCTAATCGGTACTCGAACCGTAGCCCGAATAATGCGTTCACGCCGCATTCGACCTGAAAATTCTGAAATCAATCTTCTCTGGGGTCCATGgcgctggtttctctcgatggcgataacgcatgtgcattaagcgaaagctgttgtggcactattcagtggatttgtccgattccgtatcggcctgatcatgggcgcaaaaactggtttctggtc                                                                                                                     <  2:27136‑M1/235‑124 (MQ=255)
                                                                                                                             cctgatgcGACGCTGACGCGTCTTATCATGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgggcattgg                                                                                                                <  1:410634‑M1/251‑129 (MQ=255)
                                                                                                                                      acgcggaatggtcttaccatgCCACCAAATCGGTCCGCGAACGGTAGGCCGAATAAGGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgggcattggtcgttttac                                                                                                       <  2:328906‑M1/241‑138 (MQ=255)
                                                                                                                                        cctGACGCGTCTTATCATGCCTTCAACTCTGNGCGAGACCCGTAGGGCAAATAACTCTTTCACGCCGACTCCGACCTGAAAAATCTTAAAGCAATCCTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataactcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactgttttctgggcattgggcgttttaccg                                                                                                     <  2:214867‑M1/250‑140 (MQ=255)
                                                                                                                                            aCGCGTCTTATCATGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgggcattgggc                                                                                                              <  1:414321‑M1/238‑131 (MQ=255)
                                                                                                                                            aCGCGTCTTATCATGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgggcattgggc                                                                                                              >  2:414321‑M1/1‑108 (MQ=255)
                                                                                                                                                       cATGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgggcattgggcgttttaccgctgatgagcaggaac                                                                                      >  1:466711‑M1/1‑97 (MQ=255)
                                                                                                                                                        aTGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgggcattgggcgttttaccgctgatgagcaggaac                                                                                      >  2:356340‑M1/1‑96 (MQ=255)
                                                                                                                                                          gCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgggcattgggcgttttaccgctgatgagcaggaacaat                                                                                   <  1:7375‑M1/251‑158 (MQ=255)
                                                                                                                                                          gCCTACAAATCGGTCCGAGAACCGTAGGCCGAATAAGGCGTTCACGCAGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgggcattgggcgttttaccgctgatgagcaggaacaa                                                                                    <  2:99095‑M1/250‑157 (MQ=255)
                                                                                                                                                              aCAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgggcattgggcgttttaccgctgatgagcaggaacaatcg                                                                                 <  1:194830‑M1/249‑160 (MQ=255)
                                                                                                                                                               agaaatcgtacgcgaACCGGAGTACGACAAATGCTTTCACGCCTCAGCCGACTTGAAAATTCTTACATCATTGTTCGCCGGTGGCCATGgcgctggtttctctcgatggcgagaacgcatgggcattaagcgaaagctggtgtggcactagtcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgggcattgggcgttttaccgcttatgagcaggaacaatcggat                                                                              <  2:419958‑M1/244‑163 (MQ=255)
                                                                                                                                                                 aaTCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcgtcctcatcatgggcgcaaaaactggtttctgggcattgggcgttttaccgctgatgagcaggaacaatcggatgc                                                                            >  1:194298‑M1/1‑87 (MQ=255)
                                                                                                                                                                    cTGTACGCGACCCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataccgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgggcattgggcgttttaccgctgatgagcaggaacaatcggatgcaat                                                                         >  2:188365‑M1/1‑84 (MQ=255)
                                                                                                                                                                       tACGCGCACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggagtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgggcattgggcgttttaccgctgatgagcaggaacaatcggatgaaatccg                                                                      >  2:405003‑M1/1‑81 (MQ=255)
                                                                                                                                                                        aCGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgacggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgggcattgggcgttttacagctgatgagcaggaacaatcggatgcaatccgt                                                                     >  1:226568‑M1/1‑80 (MQ=255)
                                                                                                                                                                            gacccgtaGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgggcattgggcgttttaccgctgatgagcaggaacaatcggatgcaatc                                                                        <  1:317928‑M1/241‑169 (MQ=255)
                                                                                                                                                                            gAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgggcattgggcgttttaccgctgatgagcaggaacaatcggatgcaatc                                                                        >  2:317928‑M1/1‑76 (MQ=255)
                                                                                                                                                                            gAACCGTAGCCCGCATAATGCGTTCACGCCGCATCCGACCTGACAAATCTTAAATAAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcctgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgcgtccgtatcggcctcatcatgggcgcaaaaacgggtttctgggcattgggcgttttcacgctgatgagcaggaacaatcggatgcactccgttatg                                                                 >  2:132168‑M1/1‑76 (MQ=255)
                                                                                                                                                                             aaCCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCGGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggcttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgggcattgggcgttttaccgctgatgagcaggaacactcggatgcaatccgttatg                                                                 >  2:65007‑M1/1‑75 (MQ=255)
                                                                                                                                                                              cccgTAGGCCAAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgggcattgggcgttttaccgctgatgagcaggaacaatcggatgcaatccgttatgag                                                               <  2:158129‑M1/250‑178 (MQ=255)
                                                                                                                                                                                        gAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgctaacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgggcattgggcgttttaccgctgatgagcaggaacaatcggatgcaatccgttatgagacgctgcgtt                                                     >  2:400971‑M1/1‑64 (MQ=255)
                                                                                                                                                                                         aataatGCGTTCACGCCGCTTCCGACCTGAAAATTCTTAAATCAATCTGCGCCGGGGGCCATGgcgctggtttctctcgatggctataacgcatgggcattaatcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgggcattgggcgttttaccgctgatgagcaggaacaatcggatgcaatccgttatgagacgctgcgttc                                                    <  1:181173‑M1/251‑189 (MQ=255)
                                                                                                                                                                                           taatGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgggcattgggcgttttaccgctgatgagcaggaacaatcggatgcaatccgttatgagacgctgcgttcgt                                                  >  2:130225‑M1/1‑61 (MQ=255)
                                                                                                                                                                                             atGCGTTCACGCCACTTCCGACCTGAAAATTCTTAAATCAATCTTGGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggctctattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgggcattgggcgttttaccgctgatgagcaggaacaatcggatgcaagccgttatgagacgctgcggtcgtcg                                                <  2:303057‑M1/251‑193 (MQ=255)
                                                                                                                                                                                                  ttCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtaccggcctcatcatgggcgcaaaaactggtttctgggcattgggcgttttaccgctgatgagcaggaacaatcggatgcaatccgttatgagacgctgcgttcgtcggggcc                                           >  2:429664‑M1/1‑54 (MQ=255)
                                                                                                                                                                                                      cgccgcAACCGACCTGAAAATTCTCAAACCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgaaaacgcatgggcattaagcgaaagctggtggggcactattcagtggatttttccgagtccgtatcggcctcatcatgggcgcaaaaactggtgtcggggcattgggcggtttaccgctgatgagcaggaacaatcggatgcaatccgttatgagacgctgcgttcgtcggggccgggc                                       <  2:295148‑M1/251‑202 (MQ=255)
                                                                                                                                                                                                            aTCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgattgcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgggcattgggcgttttaccgctgatgagcaggaacaatcggatgcaatccgctatgagacgctgcgttcgtcggagccgggcggtcac                                 >  2:134217‑M1/1‑44 (MQ=255)
                                                                                                                                                                                                            aTCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcacaaactggtttctgggcattgggcgttttaccgctgatgagcaggaacaatcgggtgcaatccgttatgagacgctccgttcgtcggggccgggcggtcc                                  >  2:13147‑M1/1‑44 (MQ=255)
                                                                                                                                                                                                                 aCCTGCAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgggcattgggcgttttaccgctgatgagcaggaacaatcggatgcaatccgttatgagacgctgcgttcgtcggggccgggcggtcaacatgt                            >  1:360017‑M1/1‑39 (MQ=255)
                                                                                                                                                                                                                  ccTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgggcattgggcgttttaccgctgatgagcaggaacaatcggatgcaatccgttatgagacgctgcgttcgtcggggccgggcggtcaacatgtc                           <  1:360648‑M1/251‑214 (MQ=255)
                                                                                                                                                                                                                  ccTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgggcattgggcgttttaccgctgatgagcaggaacaatcggatgcaatccgttatgagacgctgcgttcgtcggggccgggcggtcaacatgtc                           <  1:115724‑M1/251‑214 (MQ=255)
                                                                                                                                                                                                                           tCTTAACTCAATCTTCGCCGGGGGCCATGacgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggctctattcagcggatttgtccgagtccgtatctgcctcatcatgggcgcaaaaactggtttatgggcattgggcgttttaccgctgctgagcaggaacaatcggattcaatccgttatgagacgctgcgttcgtcggggccgggcggtccacatgttactcaaacc                  >  2:11439‑M1/1‑29 (MQ=255)
                                                                                                                                                                                                                               aacccaatctcatccgggggccatggcgctggttgctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtctcggcctcatcatgggcgcaaaacctggtttctgggcattgggcgttttaccgctgatgagcaggaacaatcggatgcaatccgttatgagacgctgcgttcgtcggggccgggcggtcaacatgtcaataaaaccgact              <  2:162175‑M1/238‑227 (MQ=255)
                                                                                                                                                                                                                               aaaTCAATCTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgggcattgggcgttttaccgctgatgagcaggaacaatcggatgcaatccgttatgagacgctgcgttcgtcggggccgggcggtcaacatgtcaataaaaccgac               <  1:118238‑M1/250‑226 (MQ=255)
                                                                                                                                                                                                                                  acaatctctgccgggggccAGGgcgttggtttttctcgatggctataactcatggtcagtaggcgaaagctggtgtggctctattcagtggatttgtccgagtccgtatcggcctcctcatgggcgcaaaaactggtttctgggcattgggcgttttaccgctgatgagcaggaacaatcggatgcaatccgttatgagacgctgcgttcgtcggggccgggcggtcaacatgtcaataaaaccgactcgg           <  2:280353‑M1/242‑230 (MQ=255)
                                                                                                                                                                                                                                     atcTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgggcattgggcgttttaccgctgatgagcaggaacaatcggatgcaatccgttatgagacgctgcgttcgtcggggccgggcggtcaacatgtcaataaaaccgactcggcgg        >  2:26350‑M1/1‑19 (MQ=255)
                                                                                                                                                                                                                                       cTTCGCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgggcattgggcgttttaccgctgatgagcaggaacaatcggatgcaatccgttatgagacgctgcgttcgtcggggccgggcggtcaacatgtcaataaaaccgactcggcggt       >  1:345940‑M1/1‑17 (MQ=255)
                                                                                                                                                                                                                                           gCCGGGGGCCATGgcgctggtttctctcgatggcgataacgcatgggcattaagcgaaagctggtgtggcactattcagtggatttgtccgagtccgtatcggcctcatcatgggcgcaaaaactggtttctgggcattgggcgttttaccgctgatgagcaggaacaatcggatgcaatccgttatgagacgctgcgttcgtcggggccgggcggtcaacatgtcaataaaaccgactcggcggtacgcg  >  1:154551‑M1/1‑13 (MQ=255)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                              
ATTCAGGAGATTCACATTAAAGTGATCCATATCCTGATCCAGTTGATTGAAAAAGAGATGGTTAAGTAAGTCTGGCGTAGGCCGGATAAGACGTTTACGCCGCATCCGGCATTTGTGCGCTGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACAAATCTGTACGCGAACCGTAGGCCGAATAATGCGTTCACGCCGCATCCGACCTGAAAATTCTTAAATCAATCTTCGCCGGGGGCCATGCGCTCCCGCTGTTGTGGAGGTTACCCATGTGCGAATTGCTCGGGATGAGCGCCAACGTCCCTACCGATATCTGCTTTAGTTTCACCGGGCTTGTACAGCGTGGTGGTGGAACCGGGCCACATAAAGATGGCTGGGGCATTACCTTTTACGAAGGTAAAGGCTGTCGCACATTTAAAGATCCACAACCCAGCTTTAATTCCCCCATCGCCAAACTTGTCCAGGACTACCCGATAAAATC  >  NC_000913/244053‑244538

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: