| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 675,018 | Δ14,271 bp | [ybeL]–insH3 | 15 genes [ybeL], ybeQ, ybeR, djlB, ybeT, ybeU, djlC, hscC, rihA, gltL, gltK, gltJ, sroC, gltI, insH3 |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 675018 | 689288 | 14271 | 38 [0] | [0] 38 | [ybeL]–insH3 | [ybeL],ybeQ,ybeR,djlB,ybeT,ybeU,djlC,hscC,rihA,gltL,gltK,gltJ,sroC,gltI,insH3 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 675017 | 0 (0.000) | 38 (0.660) | 34/490 | 0.4 | 100% | intergenic (‑234/‑1) | leuS/ybeL | leucine‑‑tRNA ligase/DUF1451 domain‑containing protein YbeL |
| ? | NC_000913 | 689289 = | 0 (0.000) | intergenic (‑312/+54) | insH3/lnt | IS5 family transposase and trans‑activator/apolipoprotein N‑acyltransferase | |||||
TCCTTAGGTAACATTTAGTTTGGCTAAATGTAAAGATATTGCTGTTTTATTGTTTGTTTTTGCGAGATGCGCCGCACCATTCCGAAGCAAAATTCTTAAAATGCACTCTTTTAGTGCTACCGCTGGATTACTGTGGTGCAACTAGGTTGTACTGATGCTGTTTCAGGGTTTGCCTTGTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAACAATGCCGTCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAGTCCGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCGGGCCAATCACCGC > NC_000913/689043‑689534 | ttgctcttgcatggcagccagtggtcctgttttcaatacggctacaaatgtagcgttgaggtggtttttcagatccgcatagcatagcccaaacgtccgcgtcaaaacagcctttcgcgcactcgacgttgaaatgatgcccggattactcatacattaatttacagagtttgtgggcgtattagcaaagcaaggaacaaagaacgtctattattatagtaagttaacgacccgggagatgaaacgGCATc > 2:80715‑M2/247‑251 (MQ=255) gcatggcagccagtggtcctgttttcaatacggctacaaatgtagcgttgaggtggtttttcagatccgcatagcatagcccaaacgtccgcgtcaaaacagcctttcgcgcactcgacgttgaaatgatgcccggattactcatacattaatttacagagtttgtgggcgtattagcaaagcaaggaacaaagaacgtctattattatagtaagttaacgacccgggagatgaaacgGCATCCGGTGAg < 2:421979‑M2/12‑1 (MQ=255) cagtggtcctgttttcaatacggctacaaatgtagcgttgaggtggtttttcagatccgcatagcatagcccaaacgtccgcgtcaaaacagcctttcgcgcactcgacgttgaaatgatgcccggattactcatacattaatttacagagtttgtgggcgtattagcaaagcaaggaacaaataacgtctattattatagtaagttaacgacccgggagatgaaacgGCATCCGGTGAGCGTGCCGAAat < 1:279164‑M2/23‑1 (MQ=255) tggtcctgttttcaatacggctacaaatgtagcgttgaggtggtttttcagatccgcatagcatagcccaaacgtccgcgtcaaaacagcctttcgcgcactcgacgttgaaatgatgcccggattactcatacattaatttacagagtttgtgggcgtattagcaaagcaaggaacaaagaacgtctattattatagtaagttaacgacccgggagatgaaacgGCATCCGGTGAGCGTGCCGAAATATg > 2:152237‑M2/226‑251 (MQ=255) tcaatacggctacaaatgtagcgttgaggtggtttttcagatccgcatagcatagcccaaacgtccgcgtcaaaacagcctttcgcgcactcgacgttgaaatgatgcccggattactcatacattaatttacagagtttgtgggcgtattagcaaagcaaggaacaaagaacgtctattattatagtaagttaacgacccgggagatgaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTc < 1:80278‑M2/36‑1 (MQ=255) gctacaaatgtagcgttgaggtggtttttcagatccgcatagcatagcccaaacgtccgcgtcaaaacagcctttcgcgcactcgacgttgaaatgatgcccggattactcatacattaatttacagagtttgtgggcgtattagcaaagcaaggaacaaagaacgtctattattatagtaagttaacgacccgggagatgaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGAt < 1:188537‑M2/45‑1 (MQ=255) aaatgtagcgttgaggtggtttttcagatccgcatagcatagcccaaacgtccgcgtcaaaacagcctttcgcgcactcgacgttgaaatgatgcccggattactcatacattaatttacagagtttgtgggcgtattagcaaagcaaggaacaaagaacgtctattattatagtaagttaacgacccgggagatgaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATaagaa < 1:308422‑M2/50‑1 (MQ=255) aatgtagcgttgaggttgtttttcatatccgcatagcatagcccaaacgtccgcgtcaaaacagcctttcgcgcacgcgtcgttgaaaggatgcccggattactcatacattaatttacatagtttttgggcgtattagcacaacaaggaacaaagaacgtctattattatagtaagttaacgacccgggagatgcaacgGCATCAGGTGAGCGTTCCGAAATATGGGATGTATTCCGGCACGATaagaag < 2:261061‑M2/51‑1 (MQ=255) ttcagatccgcatagcatagcccaaacgtccgcgtcaaaacagcctttcgcgcactcgacgttgaaatgatgcccggattactcatacattaatttacagagtttgtgggcgtattagcaaagcaaggaacaaagaacgtctattattatagtaagttaacgtcgcgggagatgaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGAc < 2:64580‑M2/71‑1 (MQ=255) atccgcatagcatagcccaaacgtccgcgtcaaaacagcctttcgcgcactcgacgttgaaatgatgcccggattactcatacattaatttacagagtttgtgggcgtattagcaaagcaaggaacaaagaacgtctattattatagtaagttaacgacccgggagattaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAAGGATTATTTACGTCGCTGACGCAGAc > 1:105295‑M2/175‑251 (MQ=255) agcccaaacgtccgcgtcaaaacagcctttcgcgcactcgacgttgaaatgatgcccggattactcatacattaatttacagagtttgtgggcgtattagcaaagcaaggaacaaagaacgtctattattatagtaagttaacgacccgggagatgaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACAcagc > 2:313717‑M2/162‑251 (MQ=255) agcccaaacgtccgcgtcaaaacagcctttcgcgcactcgacgttgaaatgatgcccggattactcatacattaatttacagagtttgtgggcgtattagcaaagcaaggaacaaagaacgtctattattatagtaagttaacgacccgggagatgaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACAcagc > 2:196910‑M2/162‑251 (MQ=255) aaacgtccgcgtcaaaacagcctttcgcgcactcgacgttgaaatgatgaccggattactcatacattaatttacagagtttgtgggcgtattagcaaagcaaggaacaaagaacgtctattattatagtaagttaacgacccgggagatgaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCAGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAgcagca > 1:164241‑M2/157‑250 (MQ=255) gcgtcaaaacagcctttcgcgcactcgacgttgaaatgatgcccggattactcagacattaatttacagagtttgtgggcgtattagcaaagcaaggaacaaagaacgtctattattatagtaagttaacgacccgggagatgaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAAc < 2:449541‑M2/103‑1 (MQ=255) agcctttcgcgcactcgacgttgaaatgatgcccggattactcatacattaatttacagagtttgtgggcgtattagcaaagcaaggaacaaagaacgtctattattatagtaagttaacgacccgggagatgaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAACAATGCCGTCa < 1:152237‑M2/113‑1 (MQ=255) cgcgcactcgacgttgaaatgatgcccggattactcatacattaatttacagagtttgtgggcgtattagcaaagcaaggaacaaagaacgtctattattatagtaagttaacgacccgggagatgaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAACAATGCCGTCAGCAccc < 1:190654‑M2/119‑1 (MQ=255) cgcactcgacgttgaaatgatgcccggattactcatacattaatttacagagtttgtgggcgtattagcaaagcaaggaacaaagaacgtctattattatagtaagttaacgacccgggagatgaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAACAATGCCGTCAGCACCcac > 2:398465‑M2/130‑250 (MQ=255) cccactcgacgttgaaatgatgcccggattactcatacattaatttacagagtttgtgggcgtattagcaaagcaaggaacaaagaacgtctattattatagtaagttaacgacccgggagatgaaacgGCATGCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGAATTATTTACGTCGCTGACGCAGACTCATAAACACAGCAGCAAAACCAAACAATGCCgtcagcaaacacc < 2:242697‑M2/122‑7 (MQ=255) actcgacgttgaaatgatgcccggattactcatacattaatttacagagtttgtgggcgtattagcaaagcaaggaacaaagaacgtctattattatagtaagttaacgacccgggagatgaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATACGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACAcagc > 1:87773‑M2/127‑216 (MQ=255) actcgacgttgaaatgatgcccggattactcatacattaatttacagagtttgtgggcgtattagcaaagcaaggaacaaagaacgtctattattatagtaagttaacgacccgggagatgaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACAcagc < 2:87773‑M2/90‑1 (MQ=255) gaaatgatgcccggattactcatacattaatttacagagtttgtgggcgtattaacaaagcaaggaacaaagaacgtctattattatagtaagttaacgacccgggagatgaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAACAATGCCGTCAGCACCCACAGCGGCCAGTTGcc > 2:246454‑M2/117‑251 (MQ=255) aatgatgcccggattactcatacattaatttacagagtttgtgggcgtattagcaaagcaaggaacaaagaacgtctattattatagtaagttaacgacccgggagatgaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAACAATGCCGTCAGCACCCACAGCGGCCAGTTGCCgg > 2:152514‑M2/115‑251 (MQ=255) aatgatgcccggattactcatacattaatttacagagtttgtgggcgtattagcaaagcaaggaacaaagaacgtctattattatagtaagttaacgacccgggagatgaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAACAATGCCGTCAGCACCCACAGCGGCCAGTTGCCgg > 1:314155‑M2/115‑251 (MQ=255) atgcccggattactcatacattaatttacagagtttgtgggcgtattagcaaagcaaggaacaaagaacgtctattattatagtaagttaacgacccgggagatgaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAACAATGCCGTCAGCACCCACAGCGGCCAGTTGCCGGTACg > 1:243816‑M2/111‑251 (MQ=255) tactcatacattaatttacagagtttgtgggcgtattagcaaagcaaggaacaaagaacgtctattattatagtaagttaacgacccgggagatgaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAACAATGCCGTCAGCACCCACAGCGGCCAGTTGCCCGTACGTGCGTATGgt > 2:180290‑M2/101‑251 (MQ=255) catacattaatttacagagtttgtgggcgtattagcaaagcaaggaacaaagaacgtctattattatagtaagttaacgacccgggagatgaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAACAATGCCGTCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGgtgt < 2:171912‑M2/153‑1 (MQ=255) cattaatttacagagtttgtgggcgtattagcaaagcaaggaacaaagaacgtctattattatagtaagttaacgacccgggagatgaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAACAATGCCGTCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAGTcc < 2:76442‑M2/159‑1 (MQ=255) aatttacagagtttgtgggcgtattagcaaagcaaggaacaaagaacgtctattattatagtaagttaacgacccgggagatgaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAACAATGCCGTCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAGTCCggtg > 1:12565‑M2/89‑251 (MQ=255) gtttgtgggcgaattagcaaagcaaggaacaaagaacgtctattattatagtaagttaacgacccgggagatgaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAACAATGCCGTCAGCACCCACCGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAGTCCGGTGGGCGGCGtcc > 1:5146‑M2/79‑250 (MQ=255) aggaacaaagaacgtctattattatagtaagttaacgacccgggagatgaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAACAATGCCGTCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAGTCCGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCggg > 1:40672‑M2/55‑251 (MQ=255) caaagaacgtctattattgtagtaagttaacgacccgggagatgaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAACAATGCCGTCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAGTCCGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAAc > 1:136707‑M2/50‑251 (MQ=255) gtctattattatagtaagtgaacgacccgggngatgaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAACAATGCCGTCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAGTCCGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGat < 2:218346‑M2/210‑1 (MQ=255) attattatagtaagttaacgacccgggagatgaaacgGCATCCGGTGAGAGTGCGGAAATATGGGATGTAGTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAACAATGCCGTCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAGTCCGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGatcatc < 2:441366‑M2/214‑1 (MQ=255) ttattatagtaagttaacgacccgggagatgaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAACAATGCCGTCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGGGTCCGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCGGGCGAACTGCGGGATCATCg > 2:44084‑M2/37‑251 (MQ=255) tattatagtaagttaacgacccgggagatgaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAACAATGCCGTCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAGTCCGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCg < 1:216352‑M2/215‑1 (MQ=255) taacgacccgggagatgaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAACAATGCCGTCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGGGTCCGGGGGGCGGCCGCACGTTTGTGGATAACACCTCGCGGGTGAACGGCGGGAGCATCGCCTGAATctcaacc > 2:69240‑M2/23‑248 (MQ=255) gggagatgaaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAACAATGCCGTCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAGTCCGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCGGGCCa < 2:243816‑M2/238‑1 (MQ=255) aaacgGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGTGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAACAATGCCGTCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAGTCCGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCGGGCCAATCAccgc < 1:63415‑M2/246‑1 (MQ=255) | TCCTTAGGTAACATTTAGTTTGGCTAAATGTAAAGATATTGCTGTTTTATTGTTTGTTTTTGCGAGATGCGCCGCACCATTCCGAAGCAAAATTCTTAAAATGCACTCTTTTAGTGCTACCGCTGGATTACTGTGGTGCAACTAGGTTGTACTGATGCTGTTTCAGGGTTTGCCTTGTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAACAATGCCGTCAGCACCCACAGCGGCCAGTTGCCGGTACGTGCGTATGGTGTGAGTCCGGTGGTCGGCGTCACGTTAGTGGTTAACACCTCGCGGGTGAACTGCGGGATCATCGCCTGAATCTCACCCTGCGGGCCAATCACCGC > NC_000913/689043‑689534 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |