Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,086,996 Δ13,531 bp yiiGrhaT yiiG, frvR, frvX, frvB, frvA, rhaM, rhaD, rhaA, rhaB, rhaS, rhaR, rhaT

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4086996 4100526 13531 49 [0] [0] 49 yiiG–rhaT yiiG,frvR,frvX,frvB,frvA,rhaM,rhaD,rhaA,rhaB,rhaS,rhaR,rhaT

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 40869950 (0.000)49 (0.850) 46/488 0.1 100% intergenic (+146/‑7) fdhD/yiiG sulfurtransferase for molybdenum cofactor sulfuration/DUF3829 domain‑containing lipoprotein YiiG
?NC_000913 4100527 = 0 (0.000)intergenic (‑2/‑283) rhaT/sodA rhamnose/lyxose:H(+) symporter/superoxide dismutase (Mn)

GAAGTGGCTGAGCGCTGTAATCTGACACTGGTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCAATTAAATGAAAAGGAATTTATTATCTTCCGCTATTATAGTCGCCATCATGTCCCTCGGTCTGACGGGTTGTGATGATAAAAAAGCCGAAACAGAAACGCTCCCGCCTGCCAATAGTCAACCTGCCGCACCAGCTCCTGAAGCGAAACCTACTGAAGCTCCCGTTGCAAAAGCAGAAGCTAAACCTGAAACACCTGCGCAACCGGTGGTCGATGAACAAGCGGTTTTCGACGAAAAAATGGATGTC  >  NC_000913/4086757‑4087241
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                      
gAAGTGGCTGAGCGCTGTAATCTGACACTGGTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAACTAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctc                                                                                                                                                                                                                                             >  1:193864‑M1/1‑239 (MQ=255)
       cTGAGCGCTGTAATCTGACACTGGTAGGTTTTTGTGAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAACTATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttt                                                                                                                                                                                                                                     >  2:29294‑M1/1‑232 (MQ=255)
         gAGCGCTGTAATCTGACACTGGTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttc                                                                                                                                                                                                                                   <  1:282472‑M1/251‑22 (MQ=255)
          aGCGCTGTAATCTGACACTGGTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcg                                                                                                                                                                                                                                  >  1:283192‑M1/1‑229 (MQ=255)
                       gACACTGGTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcac                                                                                                                                                                                                                         <  2:268052‑M1/247‑32 (MQ=255)
                                              cggttcgggCAACGGTTTATTCCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCTTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatc                                                                                                                                                                                              <  2:102199‑M1/247‑59 (MQ=255)
                                                      gCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtc                                                                                                                                                                                      <  1:455699‑M1/251‑67 (MQ=255)
                                                          cGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttgtcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgatt                                                                                                                                                                                  <  2:126529‑M1/251‑71 (MQ=255)
                                                                        ccGCAGCGTTTGAGCAATTAAATAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCGTATCTATAGATTTATAAGGCttcttatcctcatcatttttcgtcgcttcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaaccttgcgcctgt                                                                                                                                                                    <  2:269678‑M1/251‑85 (MQ=255)
                                                                                   gAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTCTGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcttcatttttcgtctcgtcacatctccgacgagatgtgtttaacaatcgtgctgtcgattaccctttcgcctgttgccgccgttg                                                                                                                                                         >  2:41862‑M1/1‑156 (MQ=255)
                                                                                     gCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcgcatctccgccgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtc                                                                                                                                                       >  2:79451‑M1/1‑154 (MQ=255)
                                                                                           aattaaAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgattta                                                                                                                                                 <  1:222751‑M1/251‑104 (MQ=255)
                                                                                                 aaTAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggc                                                                                                                                            >  1:109246‑M1/1‑142 (MQ=255)
                                                                                                      gTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcac                                                                                                                                      <  1:216442‑M1/251‑115 (MQ=255)
                                                                                                           gCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcat                                                                                                                                 >  1:303697‑M1/1‑132 (MQ=255)
                                                                                                              aaaTATATTAAATTGCAGGCCTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcatta                                                                                                                               >  1:97501‑M1/1‑129 (MQ=255)
                                                                                                              aaaTATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcatta                                                                                                                               >  1:159041‑M1/1‑129 (MQ=255)
                                                                                                                      tAAATTGCAGGACTTATTCATTTCGTGAATNTTATTATTTTAATAATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatccacatcatttttcgtcgcgtaacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtg                                                                                                                       <  2:232347‑M1/250‑130 (MQ=255)
                                                                                                                       aaaTTGCAGGCCTTATTAATTTCGTGAATTTTATTATTTTATTTATAAACACAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGATCAATCTCATATCTATATATTTATAAGGCttcttatccttatcatttttcgtcgcgtcacttctcagacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgacgccgttgacgttttactggcaatcacggcattatgggggcgct                                                                                                                     >  2:266126‑M1/1‑120 (MQ=255)
                                                                                                                        aaTTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATTTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatt                                                                                                                    <  2:280712‑M1/251‑133 (MQ=255)
                                                                                                                        aaTTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTATCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtagatttactggcaatcacggcattaagtgggtgatt                                                                                                                    >  1:68001‑M1/1‑119 (MQ=255)
                                                                                                                           tGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgc                                                                                                                 >  2:133186‑M1/1‑116 (MQ=255)
                                                                                                                               ggACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgctttactggcaatcacgtcattaagtgggtgatttgcttc                                                                                                              >  2:291042‑M1/1‑112 (MQ=255)
                                                                                                                               ggACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggggctttgcttc                                                                                                              >  1:332924‑M1/1‑112 (MQ=255)
                                                                                                                                    tATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatc                                                                                                         <  2:117853‑M1/250‑144 (MQ=255)
                                                                                                                                     aTTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctc                                                                                                       <  2:193752‑M1/251‑146 (MQ=255)
                                                                                                                                              gTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgattcacatctcgggcatttt                                                                                              >  1:368913‑M1/1‑97 (MQ=255)
                                                                                                                                                 aaTTTTATTATTTTATTTATAAACAAACTGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcct                                                                                           >  1:409129‑M1/1‑94 (MQ=255)
                                                                                                                                                 aaTTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGTCttcttatcctcatcctttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttcctggcaatcacggcattaagtgggtgctttgcttcacctctcgggcattttcct                                                                                           >  2:466282‑M1/1‑94 (MQ=255)
                                                                                                                                                      ttttattttatttaTAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcctgcaa                                                                                       <  2:48594‑M1/248‑162 (MQ=255)
                                                                                                                                                               atttatAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcctgcacaaccataccc                                                                             >  1:277487‑M1/1‑80 (MQ=255)
                                                                                                                                                                   ataAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcctgcaaaaccataccctta                                                                          <  2:177515‑M1/250‑175 (MQ=255)
                                                                                                                                                                         aaaaTGCGTGCAGGGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcctgcaaaaccatacccttacgaaa                                                                     >  2:130892‑M1/1‑70 (MQ=255)
                                                                                                                                                                          aaaTGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcctgcaaaaccatccccttacgaaa                                                                     >  2:300760‑M1/1‑69 (MQ=255)
                                                                                                                                                                               cGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcctgcaaaaccatacccttacgaaaagtacggc                                                             >  2:362181‑M1/1‑64 (MQ=255)
                                                                                                                                                                                   tAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttctcatctcgggcattttcctgcaaaaccatccccttacgaaaagtacggcattg                                                         >  2:318522‑M1/1‑60 (MQ=255)
                                                                                                                                                                                         ggtgttctttTTTTATTTATTATGTTCACTTTCTTATTTATATATTTATAAGGCttctgatcctcatcatttttcgtcgcgtcacatatccgacgtgatgagtgtaaaaatcgtgctgtcgataaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcctgcaaaaccatacccttccgaaaagtacggcatggataatc                                                   <  1:215672‑M1/247‑198 (MQ=255)
                                                                                                                                                                                            tttCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcctgcaaaaccatacccttacgaaaagtacggcattgataatcat                                                 <  1:267637‑M1/250‑200 (MQ=255)
                                                                                                                                                                                               cTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGTCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcctgcaaaaccatacccttacgaaaagtacggcattgataatcattttc                                             >  2:47172‑M1/1‑48 (MQ=255)
                                                                                                                                                                                                    ttCATTTATTATGTTCACTCTCTTATCTATATCTTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattacgtgggtgatttgcttcacatctcgggcattttcctgcaaaaccatacccttacgaaaagtacggcattgataatcattttcaatat                                        >  1:387832‑M1/1‑43 (MQ=255)
                                                                                                                                                                                                               tGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcctgcaaacccatacccttacgaaaagtaaggcattgataatcattttcaatatcatttaatta                              >  1:290458‑M1/1‑32 (MQ=255)
                                                                                                                                                                                                                   cACTTTCTTATCTAAATATTTATAAGGCttcntatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgttctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcctgcaaaaccatacccttacgaaaagtacggcattgataatcattttcaatatcatttaattaactat                         <  2:231951‑M1/251‑224 (MQ=255)
                                                                                                                                                                                                                            aTCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcctgcaaaaccatacccttacgaaaagtacggcattgataatcattttcaatatcatttaattaactataatgaacc                 <  1:133896‑M1/250‑232 (MQ=255)
                                                                                                                                                                                                                               tatataTTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcctgcaaaaccatacccttacgaaaagtacggcattgata                                                      >  2:455028‑M1/1‑16 (MQ=255)
                                                                                                                                                                                                                               tatataTTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcctgcaaaaccatacccttacgaaaagtacggcattgata                                                      <  1:455028‑M1/210‑195 (MQ=255)
                                                                                                                                                                                                                                       tataAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcctgcaaaaccatacccttacgaaaagtacggcattgataatcattttcaatatcatttaattaactataatgaaccaactgcttacg      <  1:285877‑M1/250‑243 (MQ=255)
                                                                                                                                                                                                                                        ataAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcctgcaaaacc                                                                                   <  2:186299‑M1/172‑166 (MQ=255)
                                                                                                                                                                                                                                        ataAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcctgcaaaacc                                                                                   >  1:186299‑M1/1‑7 (MQ=255)
                                                                                                                                                                                                                                           aGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcctgaaaaaccatacccttacgaaaagtacggcattgataatcattttcaatatcatttaattaactataatgaaccacctgcttacgcggc  >  2:164539‑M1/1‑4 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                      
GAAGTGGCTGAGCGCTGTAATCTGACACTGGTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCAATTAAATGAAAAGGAATTTATTATCTTCCGCTATTATAGTCGCCATCATGTCCCTCGGTCTGACGGGTTGTGATGATAAAAAAGCCGAAACAGAAACGCTCCCGCCTGCCAATAGTCAACCTGCCGCACCAGCTCCTGAAGCGAAACCTACTGAAGCTCCCGTTGCAAAAGCAGAAGCTAAACCTGAAACACCTGCGCAACCGGTGGTCGATGAACAAGCGGTTTTCGACGAAAAAATGGATGTC  >  NC_000913/4086757‑4087241

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.