Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,640,057 Δ7,591 bp [rrrQ][dicC] 18 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1640057 1647647 7591 51 [0] [0] 51 [rrrQ]–[dicC] [rrrQ],[ydfR],essQ,ynfU,cspB,cspF,ynfS,ydfT,ydfU,rem,hokD,relE,relB,ydfV,flxA,ydfW,ydfX,[dicC]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 16400560 (0.000)51 (0.890) 49/490 0.1 100% coding (2/534 nt)
coding (310/312 nt)
rrrQ
ydfR
putative lysozyme
protein YdfR
?NC_000913 1647648 = 0 (0.000)coding (203/231 nt) dicC putative DNA‑binding transcriptional regulator DicC

ATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATTTTTGTGTTCATAGATATTTATGATGAGGACGCTCGTGCTTATTGGCAGGATTTTCAATCTTAAAGGAGTACTGATGCTGCAGATAAGACTCAACTTTTTCTGACAATTTTTCTGCTACTTCCAGGAAGACTTGCCGGACGCTCCTTCTGGCTGCTGCCTCATAAAACTCCAGCGCAGCTCCTTCAACACGGTCCATGGCGACATCCAGGTCAAAAATTTCACCGTCAAAGCGTTCTTTGTCCTGTAAGGC  >  NC_000913/1639819‑1640296
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                
aTGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttc                                                                                                                                                                                                                                      <  1:389126‑M1/251‑13 (MQ=255)
  ggtgttgACCTGTTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCTCCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGTTATGCCATTGTGTGGTTCCCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCGGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTTTGTTCAcccgcccgcttcgt                                                                                                                                                                                                                                    <  2:403092‑M1/248‑15 (MQ=255)
         aCCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacg                                                                                                                                                                                                                              >  1:459455‑M1/1‑230 (MQ=255)
             ggTCGCCTTTTTCATTTGACAGTTTCAGATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGTCAGATTGTCCATATGCCAGAACCATCGCGGGATTCCATTGTGTGGTTACCTTCTTTTTCGTCCTGAAACGGGTCAAGTGTCTGAGGAGCAGATGCTCCAGCACCATTCAGCGCCAGAACGGCAGCCGACAGGCAGTATCTGATTTTTTGTGTTCAcccgcccgcttcttcttacgatat                                                                                                                                                                                                                          <  2:36180‑M1/250‑25 (MQ=255)
               ccgCATTTTTCCGTCGACAGTTTCATAGTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACATATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGTGCCACAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattca                                                                                                                                                                                                                       <  1:423522‑M1/250‑28 (MQ=255)
                      tttCCTTCGACAGTTTCAGATTAGGAAAAACGGTTTTTCCATCCACTACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGACACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAccctcccgcttcgtcttacgatattcatcataa                                                                                                                                                                                                                 >  2:381640‑M1/1‑217 (MQ=255)
                         ccTTCGCCAATTCCATATTGGGAAAACCGGTTTTCCCATCCTCCACTGTGGCTCCCCGACAGATGGTCCATATGCCGGAACCATCGCGGTATGCCATTGTGGTGTTGCCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGGGGAGCAGATGCGCCAGCACCAATCATCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTTGTCCcccgcccgcgtcgtcttacgatattcatcataaact                                                                                                                                                                                                              <  2:38583‑M1/250‑37 (MQ=255)
                            tCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttg                                                                                                                                                                                                           <  2:3412‑M1/250‑40 (MQ=255)
                               aCAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggat                                                                                                                                                                                                       >  2:327406‑M1/1‑208 (MQ=255)
                                 aGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatca                                                                                                                                                                                                     <  1:33892‑M1/251‑46 (MQ=255)
                                  gTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcat                                                                                                                                                                                                    >  1:139407‑M1/1‑205 (MQ=255)
                                         atTGGGAAAAACGGTTTTTCCTTCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTTTCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaa                                                                                                                                                                                              <  2:81451‑M1/250‑53 (MQ=255)
                                                 aaaCGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgc                                                                                                                                                                                     <  1:313998‑M1/251‑62 (MQ=255)
                                                   aCGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgca                                                                                                                                                                                    >  1:100444‑M1/1‑188 (MQ=255)
                                                         tttCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCCTCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggctcatactgaagctccccgccagatgcc                                                                                                                                                                             >  2:375597‑M1/1‑182 (MQ=255)
                                                                cccccactgtGGCACCCCGACAGATGGTCCATATGCCATAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAATTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaacttttggatcatactgaagctcccctccagatgcctcctgta                                                                                                                                                                      <  1:160958‑M1/248‑77 (MQ=255)
                                                                 caccacTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtag                                                                                                                                                                     <  1:345939‑M1/251‑78 (MQ=255)
                                                                   ccacTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagac                                                                                                                                                                   <  1:370150‑M1/251‑80 (MQ=255)
                                                                        gtgGCACCACGACAGCTGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACCGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatacttaagctccccgccagatgcctactgtagacgcatc                                                                                                                                                              >  2:163605‑M1/1‑167 (MQ=255)
                                                                          ggCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgc                                                                                                                                                            <  1:277553‑M1/251‑87 (MQ=255)
                                                                          ggCACCCCGACAGATGGTCCATATGACAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgcagctccccgccagatacctcctgtagacgcctcgc                                                                                                                                                            >  2:183892‑M1/1‑165 (MQ=255)
                                                                                ccGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataacctttgggatcatactgacgctccccgccagatgcctcctgaagacgcatatcgcgacc                                                                                                                                                      >  2:93766‑M1/1‑159 (MQ=255)
                                                                                                      gAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttc                                                                                                                                >  1:378962‑M1/1‑137 (MQ=255)
                                                                                                        aCCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttcc                                                                                                                               >  1:151848‑M1/1‑135 (MQ=255)
                                                                                                            gcgcggTATGCCATTGTGTGGTTGCCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagcta                                                                                                                          <  2:100475‑M1/250‑121 (MQ=255)
                                                                                                                   aTGCCCTTGTGTGGTTACCTTCTTTTTCGTCCAGCAAATGGTAAAGCATCTGAGGAGCAGATGCGCTAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTGTCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggctcatactgaagctcaccgccagatgcctcctgtagacgcatcgctcgaccttcggaaactaaatcccctttccagctataaagcg                                                                                                                   >  2:379746‑M1/1‑124 (MQ=255)
                                                                                                                          tgtttggttcCCTTCTTTTGCGTCCAAAACCGGGTCAAGTATCCGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGCCAGGCCGTATCTGATCTTTTGTGTTCAccctcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagcca                                                                                                             <  2:111238‑M1/246‑134 (MQ=255)
                                                                                                                             gtgGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCTCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaaccgaagccaaccg                                                                                                         >  2:42435‑M1/1‑114 (MQ=255)
                                                                                                                               ggTTACCTTCTTTTCCGTCCAGAAACTGGTCAAGTACCTGAGGAGCGGTTGCGCCACCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaa                                                                                                       <  2:382258‑M1/251‑140 (MQ=255)
                                                                                                                                          ttttCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgct                                                                                               <  1:217633‑M1/248‑148 (MQ=255)
                                                                                                                                          ttttCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGAGGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgct                                                                                               <  1:77422‑M1/248‑148 (MQ=255)
                                                                                                                                              cGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGACAGAACGGCAGACGAAAGGCCGTATCTGATCTTTTGTGTTCAccagcccgcttcgtcttacgatataaatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgcggattgtg                                                                                        >  1:294601‑M1/1‑97 (MQ=255)
                                                                                                                                                       aCTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttg                                                                               <  1:98591‑M1/251‑164 (MQ=255)
                                                                                                                                                          gttcaAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgttt                                                                            <  2:273891‑M1/249‑167 (MQ=255)
                                                                                                                                                             cAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttg                                                                         <  1:46145‑M1/251‑170 (MQ=255)
                                                                                                                                                                           gCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaa                                                           <  1:453754‑M1/251‑184 (MQ=255)
                                                                                                                                                                            cAGATGCGCCAGCTCCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAccggcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctcc                                                                                                                                                                                         <  2:190092‑M1/124‑58 (MQ=255)
                                                                                                                                                                            cAGATGCGCCAGCACCAATCAGCGCCAGCAAGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgaccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctcc                                                                                                                                                                                         >  1:190092‑M1/1‑67 (MQ=255)
                                                                                                                                                                              gATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgcgatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagtgttgtttttgaaccgaaatacaaaaga                                                        <  1:408307‑M1/251‑187 (MQ=255)
                                                                                                                                                                              gATGCGCCAGCACCAATAAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaacg                                                         >  2:433501‑M1/1‑65 (MQ=255)
                                                                                                                                                                                tGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagc                                                      >  1:279665‑M1/1‑63 (MQ=255)
                                                                                                                                                                                        cccaaatcagCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgttcaagttttgtttttgaaccgaaatacaaaagagcgtcagttt                                              <  2:321565‑M1/247‑197 (MQ=255)
                                                                                                                                                                                                aGCGCCAGAACGGCAGCCGACAGGCCGTATCTGAGCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagttttaagcatt                                      <  1:266671‑M1/251‑205 (MQ=255)
                                                                                                                                                                                                aGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagttttaagcatt                                      <  1:327406‑M1/251‑205 (MQ=255)
                                                                                                                                                                                                      aGAACGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataacctttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagttttaagcatttaaaac                                >  1:132212‑M1/1‑41 (MQ=255)
                                                                                                                                                                                                         aCGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagttgtaagcatttaaaacacc                             <  1:143484‑M1/251‑214 (MQ=255)
                                                                                                                                                                                                          cGGCAGCCGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaanagagcgtcagttttaagcatttaaaccacct                            >  2:216273‑M1/1‑37 (MQ=255)
                                                                                                                                                                                                           ggCAGCCGACAGGCCGTATCTTATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagttttaagcatttaaaacacctt                           <  1:433501‑M1/251‑216 (MQ=255)
                                                                                                                                                                                                                ccGACAGGCCGTATCTGATCTTTTGTGTTCAcccgcccgcttcgtcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagttttaagcatttaaaacacctttattg                      <  1:264917‑M1/251‑221 (MQ=255)
                                                                                                                                                                                                                        ccGTATCTGATCTTTTGTGTTCCcccgcccgcatcggcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaatcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagatcgtcagttttaagcatttaaaacacctttattgtttgtcat              <  2:425786‑M1/251‑229 (MQ=255)
                                                                                                                                                                                                                                      tttGTGTTCCcccgcccgcttcttcttacgatattcatcataaactttgggatcatactgaagctccccgccagatgcctcctgtagacgcatcgcgcgaccttcgggaactaaagcccctttccagctataaagcgaagccaaacgaatacctgctgcttgtgcaagttttgtttttgaaccgaaatacaaaagagcgtcagttttaagcatttaaaacccctttattgttagtcataactaacaagat  <  1:375597‑M1/250‑241 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                
ATGGCGTTGACCTGGTCGCATTTTTCCTTCGACAGTTTCATATTGGGAAAAACGGTTTTTCCATCCACCACTGTGGCACCCCGACAGATGGTCCATATGCCAGAACCATCGCGGTATGCCATTGTGTGGTTACCTTCTTTTTCGTCCAGAAACTGGTCAAGTATCTGAGGAGCAGATGCGCCAGCACCAATCAGCGCCAGAACGGCAGCCGACAGGCCGTATCTGATTTTTGTGTTCATAGATATTTATGATGAGGACGCTCGTGCTTATTGGCAGGATTTTCAATCTTAAAGGAGTACTGATGCTGCAGATAAGACTCAACTTTTTCTGACAATTTTTCTGCTACTTCCAGGAAGACTTGCCGGACGCTCCTTCTGGCTGCTGCCTCATAAAACTCCAGCGCAGCTCCTTCAACACGGTCCATGGCGACATCCAGGTCAAAAATTTCACCGTCAAAGCGTTCTTTGTCCTGTAAGGC  >  NC_000913/1639819‑1640296

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.