Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	728,735	Δ10,773 bp		[kdpF]–[phr]	[kdpF], ybfA, rhsC, ybfB, ybfC, ybfQ, ybfD, [ybgA], [phr]

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	728735	739507	10773	64 [0]	[0] 64	[kdpF]–[phr]	[kdpF],ybfA,rhsC,ybfB,ybfC,ybfQ,ybfD,[ybgA],[phr]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 728734	0 (0.000)	64 (1.120)	57/488	0.0	100%	coding (88/90 nt)	kdpF	K(+) transporting P‑type ATPase subunit KdpF
	?	NC_000913	739508 =	0 (0.000)					coding (508/510 nt) coding (2/1419 nt)	ybgA phr	DUF1722 domain‑containing protein YbgA deoxyribodipyrimidine photolyase

AACAGCACCGCCAGCCCCAGCATGTTCAGGCCGAGAATGGCACAAAGATATTGCTTCCAGTTCATCTCACGGTCAGAGACGCCAAGTGCGCGAAAAAGTACGCGCTCAACGCCCGTTGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAGAACGCCTCCGCATTGATCAGGGCATAAACCAGATAACCCAGTAATAAAAACACCAGCAATACGCCGGTTATCACGCCTGCACTCACAGTGCACCTCCAGTGGCCTAAAAGTGATACCGGAAGGGTAGAATTCTGGCTGCAAAGATTTCGCAAAAATCTGCGGGCGGGGTGTAAAAAAAGTATAAAAATGGCAAAAGCCATGATTTAACTAATGTTTAGTATTAATTTAACTTTTGTGTAACT  >  NC_000913/728500‑728977                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                    aaCAGCACCGCCAGCCCCAGCATGTTCAGGCCGAGAATGGCACAAAGATATTGCTTCCAGTTCATCTCACGGTCAGAGACGCCAAGTGCGCGAAAAAGTACGCGCTCAACGCCCGTTGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggt                                                                                                                                                                                                                                     >  1:451432‑M1/1‑235 (MQ=255) aaCAGCACCGCCAGCCCCAGCATGTTCAGGCCGAGAATGGCACAAAGATATTGCTTCCAGTTCATCTCACGGTCAGAGACGCCAAGTGCGCGAAAAAGTACGCGCTCAACGCCCGTTGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggt                                                                                                                                                                                                                                     >  1:261746‑M1/1‑235 (MQ=255) aaCAGCACCGCCAGCCCCAGCATGTTCAGGCCGAGAATGGCACAAAGATATTGCTTCCAGTTCATATCACGGTCAGAGACGCCAAGTGCGCGAAAAAGTACGCGCTCAACGCCCGTTGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggt                                                                                                                                                                                                                                     >  1:257123‑M1/1‑235 (MQ=255)       cccgCCAGCCCCAGCATGTTCAGGCCGAGAATGGCACAAAGATATTGCTTCCAGTTCATCTCACGGTCAGAGACGCCAAGTGCGCGAAAAAGTACGCGCTCAACGCCCGTTGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtt                                                                                                                                                                                                                               <  1:72997‑M1/250‑23 (MQ=255)               ccccAGCATGTTCAGGCCGAGCATGGCACAAAGATATTGCTTCCAGTTCATCTAACGGTCAGAGACGCCAAGTGCGCGAAACAGTACGCGCTCAACGCCCGTTGTACCGAGAAGAGGACTGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccagg                                                                                                                                                                                                                       >  1:444120‑M1/1‑221 (MQ=255)               ccccAGCAGGTTCAGGCCGAGAATGGCACAAAGATATTGCTTCCAGTTCATCGCACGGTCAGAGACGCCAAGTGCGCGAAAAAGTACGCGCTCACCGCCCGTTGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGATCCCTTGCGCAGCCATCAtgactccccatctggtctggtttcgccagg                                                                                                                                                                                                                       <  2:367565‑M1/251‑31 (MQ=255)                   aGCATGTTCAGGCCGAGAATGGCACAAAGATATTGCTTCCAGTTCATCTCACGGTCAGAGACGCCAAGTGCGCGAAAAAGTACGCGCTCAACGCCCGTTGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggattt                                                                                                                                                                                                                   >  1:415702‑M1/1‑217 (MQ=255)                    gCATGTTCAGGCCGAGAATGGCACAAAGATATTGCTTCCAGTTCATCTCACGGTCAGAGACGCCAAGTGCGCGAAAAAGTACGCGCTCAACGCCCGTTGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggattta                                                                                                                                                                                                                  <  2:464489‑M1/251‑36 (MQ=255)                             ggCCGAGAATGGCACAAAGATATTGCTTCCAGTTCATCTCACGGTCAGAGACGCCAAGTGCGCGAAAAAGTACGCGCTCAACGCCCGTTGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcac                                                                                                                                                                                                         >  2:161106‑M1/1‑207 (MQ=255)                                cGAGAATGGCACAAAGATATTGCTTCCAGTTCATCTCACGGTCAGAGACGCCAAGTGCGCGAAAAAGTACGCGCTCAACGCCCGTTGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgat                                                                                                                                                                                                      <  1:384879‑M1/251‑48 (MQ=255)                                cGAGAATGGCACAAAGATATTGCTTCCAGTTCATCTCACGGTCAGAGACGCCAAGTGCGCGAAAAAGTACGCGCTCAACGCCCGTTGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgat                                                                                                                                                                                                      >  1:201179‑M1/1‑204 (MQ=255)                                 gagaATGGCACAAAGATATTGCTTCCAGTTCATCTCACGGTCAGAGACGCCAAGTGCGCGAAAAAGTACGCGCTCAACGCCCGTTGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgata                                                                                                                                                                                                     <  1:244458‑M1/251‑49 (MQ=255)                                  agaATGGCACAACGATATTGCTTCCAGTTCATCTCACGGTCAGAGACGCCAAGTGCGCGAAAAAGTACGCGCTCAACGCCCGTTGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGAAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtcnggtttcgccaggatttacgtctgcacgata                                                                                                                                                                                                     >  2:206927‑M1/1‑202 (MQ=255)                                   gaATGGCACAAAGATATTGCTTCCAGTTCATCTCACGGTCAGAGACGCCAAGTGCGCGAAAAAGTACGCGCTCAACGCCCGTTGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCCtgactacccatctggtctggtttcgccaggatttacgtctgcccgataat                                                                                                                                                                                                   >  2:173704‑M1/1‑201 (MQ=255)                                   gaATGGCACAAAGATATTGCTTCCAGTTCATCTCACGGTCAGAGACGCCAAGTGCGCGAAAAAGTACGCGCTCAACGCCCGTTGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttccccaggatttacgtctgcacgataat                                                                                                                                                                                                   >  2:180416‑M1/1‑201 (MQ=255)                                        gCACAAAGATATTGCTTCCAGTTCATCTCACGGTCAGAGACGCCAAGTGCGCGAAAAAGTACGCGCTCAACGCCCGTTGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgc                                                                                                                                                                                              >  1:334907‑M1/1‑196 (MQ=255)                                          acaAAGATATTGCTTCCAGTTCATCTCACGGTCAGAGACGCCAAGTGCGCGAAAAAGTACGCGCTCAACGCCCGTTGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcac                                                                                                                                                                                            <  1:164222‑M1/251‑58 (MQ=255)                                           caAAGATATTGCTTCCAGTTCATCTCACGGTCAGAGACGCCAAGTGCGCGAAAAAGTACGCGCTCAACGCCCGTTGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcact                                                                                                                                                                                           >  1:366091‑M1/1‑193 (MQ=255)                                               gATATTGCTTCCAGTTCATCTCACGGTCAGAGACGCCAAGTGCGCGAAAAAGTACGCGCTCAACGCCCGTTGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacttctgcacgataatctcgcactggct                                                                                                                                                                                       <  1:130176‑M1/251‑63 (MQ=255)                                                  atTGCTTCCAGTTCATCTCACGGTCAGAGACGCCAAGTGCGCGAAAAAGTACGCGCTCAACGCCCGTTGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgcc                                                                                                                                                                                    <  1:250146‑M1/251‑66 (MQ=255)                                                        tCCAGTTCATCGCACGGTCAGAGACGCCAAGTGCGCGAAAAAGTACGCGCTCAACGCCCGTTGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCTCCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctg                                                                                                                                                                               <  2:310293‑M1/250‑71 (MQ=255)                                                            gTTCATCTCACGGTCAGAGACGCCAAGTGCGCGAAAAAGTACGCGCTCAACGCCCGTTGTACCGGGGAGGGGCATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAACAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttaagtctgcacgataatctcgccctggccgccgcctgccgc                                                                                                                                                                           >  1:441823‑M1/1‑176 (MQ=255)                                                               cATCTCACGGTCAGAGACGCCAAGTGCGCGAAAAAGTACGCGCTCAACGCCCGTTGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACCCCAGTAAAAACGTGGCGATCAGTCAGCACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcccgataatcttgcactgactgccgcctgccgccatt                                                                                                                                                                       >  2:197011‑M1/1‑173 (MQ=255)                                                                 cctcaCGGTCAGAGACGCCAGTTGCTCGAAAAAGTACGCTCTCAACGCCCGTTGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccagctggtctggtttcgccaggatttacgtctgcactataatctcgcactggctgccgcctgccgcaattcg                                                                                                                                                                     <  2:426542‑M1/250‑81 (MQ=255)                                                                      cgggcagagACGCCAAGGGCGCGAAAAAGTACGCGCTCAACGCCCGTTGTGCCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgc                                                                                                                                                                <  2:112706‑M1/247‑86 (MQ=255)                                                                                 gCCAAGTGCGCGAAAAAGTACGCGCTCAAAGCCCGTTGTACCGGGACGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggcctggtttcgccaggatttacgtctgcacgataatctcgcactggatgccgcctgccgcaattcgtctgcacccgtgatgg                                                                                                                                                     >  2:295930‑M1/1‑155 (MQ=255)                                                                                   cAAGTGCGCGAAAAAGTACGCGCTCAACGCCCGTTGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcg                                                                                                                                                   >  1:121182‑M1/1‑153 (MQ=255)                                                                                     aGTGCGCGAAAAAGTACGCGCTCAACGCCCGTTGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcgtt                                                                                                                                                 >  1:261625‑M1/1‑151 (MQ=255)                                                                                      gTGCGCGAAAAAGTACGCGCTCAACGCCCGTTGTACCGGGCAGAGGACTGTCATTAATCCGCCGCGCCAGCCCGCTGCCTAAATGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgcctacccatctggtctggtttagccaggatttacgtctgcacgataatctcacactggctgccgccttccgcaattcgtctgcacgcgtgctggcgttg                                                                                                                                                >  2:453742‑M1/1‑150 (MQ=255)                                                                                      gTGCGCGAAAAAGTACGCGCTCAACGCCCGTTGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttg                                                                                                                                                >  2:250700‑M1/1‑150 (MQ=255)                                                                                                          tCAACGCCCGTTGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgcc                                                                                                                             >  1:123681‑M1/1‑130 (MQ=255)                                                                                                               gCCCGTTGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctngcgttgtatatcgctacaccacgccagtggg                                                                                                                       >  2:217585‑M1/1‑125 (MQ=255)                                                                                                               gCCCGATGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgcccggggg                                                                                                                       >  2:124554‑M1/1‑125 (MQ=255)                                                                                                               gCCCGATGAACCGGGACGAGGAATGTCATTACTCAGCCGCGCCAGCCCGCTGCCTAAAGGCCGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGGAAGAACCCTTGCGCCGCCATCAtgactaaccatctggtctggtttcgccaggatttacgtctgcacgataatatcgcactggctgccgcctgccgcaagtcgtctgcccgcgtgctggcgttgtatatcgctacgccaagccagtggg                                                                                                                       >  2:382011‑M1/1‑125 (MQ=255)                                                                                                                      gTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGCCGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCAATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgccagtgggcgacgc                                                                                                                 >  2:186107‑M1/1‑118 (MQ=255)                                                                                                                           gggAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgccagtgggcgacgcataac                                                                                                            >  1:104317‑M1/1‑113 (MQ=255)                                                                                                                             gAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgccagtgggcgacgcataacatg                                                                                                         <  1:450925‑M1/251‑141 (MQ=255)                                                                                                                                    aaTGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgccagtgggcgacgcataacatgtcgccgc                                                                                                  >  1:444834‑M1/1‑104 (MQ=255)                                                                                                                                         cATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACCCCAGTAAAACCGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatcgcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgccagtgggcgacgcataacatgtcgccgcgtcag                                                                                             <  2:124327‑M1/251‑153 (MQ=255)                                                                                                                                             aaTCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcttgtgatatcgctacaccacgccagtgggcgacgcataacatgtcgccgcgtcaggct                                                                                          <  1:300568‑M1/250‑156 (MQ=255)                                                                                                                                                cAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgccagtgggcgacgcataacatgtcgccgcgtcaggctgaac                                                                                      >  1:330162‑M1/1‑92 (MQ=255)                                                                                                                                                         cAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGGGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgccagtgggcgacgcataacatgtcgccgcgtcaggctgaacttatcaatg                                                                             <  2:451432‑M1/251‑169 (MQ=255)                                                                                                                                                            cccGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgccagtgggcgacgcataacatgtcgccgcgtcaggctgaacttatcaatgctc                                                                          <  1:347123‑M1/251‑172 (MQ=255)                                                                                                                                                                          gACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgccagtgggcgacgcataacatgtcgccgcgtcaggctgaacttatcaatgctcaactgaatgggcta                                                            <  1:207476‑M1/251‑186 (MQ=255)                                                                                                                                                                            cgcgCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgccagtgggcgacgcataacctgtcgcagcgtcaggctgaacttatcaatgctcaactgactggtctac                                                           >  1:379911‑M1/1‑64 (MQ=255)                                                                                                                                                                             gcgcAAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCTCAGCCATCAtgacgacccatctggtctggtttcgccaggatttacgtcgtcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgccagtgggcgacgcataacatgtcgccgcgtcaggctgaacttatcaatgctcaactgaatgggctacaa                                                         <  2:25626‑M1/251‑189 (MQ=255)                                                                                                                                                                               gcCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctccaccacgccagtgggcgacgcataacatgtcgccgcgtcaggctgaacttatcaatgctcaactgaatgggctacaaat                                                       >  2:292365‑M1/1‑61 (MQ=255)                                                                                                                                                                                      ccATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgccagtgggcgacgcataacatgtcgccgcgtcaggctgaacttatcaatgctcaactgaatgggctacaaatagcgctt                                                >  2:365681‑M1/1‑54 (MQ=255)                                                                                                                                                                                      ccATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgccagtgggcgacgcataacatgtcgccgcgtcaggctgaacttatcaatgctcaactgaatgggctacaaatagcgctt                                                >  1:110061‑M1/1‑54 (MQ=255)                                                                                                                                                                                        aTTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttccgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgccagtgggcgacgcataacatgtcgccgcgtcaggctgaacttatcaatgctcaactgaatgggctacaaatagcgcttgc                                              <  1:87733‑M1/251‑200 (MQ=255)                                                                                                                                                                                         ttAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgccagtgggcgacgcataacatgtcgccgcgtcaggctgaacttatcaatgctcaactgaatgggctacaaatagcgcttgcg                                             >  1:14431‑M1/1‑51 (MQ=255)                                                                                                                                                                                           aaCACCAGTAAAAACGTGGCGATCAGTAAGAACCCTGGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgccctggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgccagtgggcgacgcataacatgtcgccgcgtcaggctgaacttatcaatgctcaactgaatgggctacaaatagcgcttgcgga                                           <  2:419099‑M1/251‑203 (MQ=255)                                                                                                                                                                                            acacCAGTAAAAACGTGGCGATCAGTAAGCACCCTTGAACAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctgccgcaaatcgtatgcacgcgtgctggcgttgtatatcgctacaccacgccagtgggcgaagcataacatgtcgccgcgtaaggctgaacttatcaatgcccgcctacatgggctacaaatagcgcttgcggc                                           >  2:273872‑M1/1‑48 (MQ=255)                                                                                                                                                                                              acCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgccagtgggcgacgcataacatgtcgccgcgtcaggctgaacttatcaatgctcaactgaatgggctacaaatagcgcttgcggaaa                                         >  2:269872‑M1/1‑46 (MQ=255)                                                                                                                                                                                               ccAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgccagtgggcgacgcataacatgtcgccgcgtcaggctgaacttatcaatgctcaactgaatgggctacaaatagcgcttgcggaaaaa                                       <  1:161106‑M1/251‑207 (MQ=255)                                                                                                                                                                                                               gATCAGAAAGAACCCTTGCGCAGCCATCAtgactacccatctggactggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgccagtgggcgacgcataacatgtcgccgcgtcaggctgaacttatcattgctcaactgaatgggctacaaatagcgcttgcggaaaaaggtattcctttattgt                       >  2:341679‑M1/1‑29 (MQ=255)                                                                                                                                                                                                                aTCAGTAAGAACACTCGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcccgccgcaattcgtctgcacgcgagctggcgttgtatatcgctacaccacgccagtgggcgacgcataacatgtcgccgcgtcaggctgaacttatcagtgctcaactgactgggctaaaaatagcgcttgcggaaaaagggattcctttattgtt                      >  2:412443‑M1/1‑28 (MQ=255)                                                                                                                                                                                                                 tCAGTAAGAACCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgccagtgggcgacgcataacatgtcgccgcgtcaggctgaacttatcaatgctcaactgaatgggctacaaatagcgcttgcggaaaaaggtattcctttattgttc                     >  1:198248‑M1/1‑27 (MQ=255)                                                                                                                                                                                                                 ccaGTAAGAACCCTTGCGCAGCCATCAtgactacccagctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgccagtgggcgacgcataacatgtcgccgcgtcaggctgaacttatcaatgctcaactgaatgggctacaaatagcgcttgcggaaaaaggtattcctttattgttc                     <  2:196930‑M1/250‑225 (MQ=255)                                                                                                                                                                                                                      aaGACCCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgccagtgggcgacgcataacatgtcgccgcgtcaggctgaacttatcaatgctcaactgaatgggctacaaatagcgcttgcggaaaaaggtattcctttattgttccgtg                 <  2:366091‑M1/250‑229 (MQ=255)                                                                                                                                                                                                                          aCCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccatgatttacgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgccagtgggcgacgcataacatgtcgccgcgtcaggctgaacttatcaatgctcaactgaatgggctacaaatagcgcttgcggaaaaaggtattcctttattgttccgtga                <  2:151886‑M1/247‑230 (MQ=255)                                                                                                                                                                                                                          aCCCTTGCGCAGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgataatctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgccagtgggcgacgcataacatgtcgccgcgtcaggctgaacttatcaatgctcaactgaatgggctacaaatagcgcttgcggaaaaaggtattcctttattgttccgtga                >  1:151886‑M1/1‑18 (MQ=255)                                                                                                                                                                                                                                 cgcAGCCATCAtgactacccctctggtctggtttcgcccggatttacgtctgcccgataatctcgccctggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgccagtgggcgacgcataacatgtcgccgcgtcaggctgaacttatcaatgctcaactgaatgggctacaaatagcgcttgcggaaaaaggtattcctttattgttccgtgaagtggatgact     <  1:276475‑M1/251‑241 (MQ=255)                                                                                                                                                                                                                                    aGCCATCAtgactacccatctggtctggtttcgccaggatttacgtctgcacgatactctcgcactggctgccgcctgccgcaattcgtctgcacgcgtgctggcgttgtatatcgctacaccacgccagtgggcgacgcataacatgtcgccgcgtcagactgaacttatcaatgctcaactgaatgggctacaaatagcgattgcggaacaaggtattcctttattgttccgagcagtggatgactttg  >  2:465791‑M1/1‑8 (MQ=255)                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                    AACAGCACCGCCAGCCCCAGCATGTTCAGGCCGAGAATGGCACAAAGATATTGCTTCCAGTTCATCTCACGGTCAGAGACGCCAAGTGCGCGAAAAAGTACGCGCTCAACGCCCGTTGTACCGGGAAGAGGAATGTCATTAATCAGCCGCGCCAGCCCGCTGCCTAAAGGACGCGCCAGCACCATTAACACCAGTAAAAACGTGGCGATCAGTAAGAACCCTTGCGCAGCCATCAGAACGCCTCCGCATTGATCAGGGCATAAACCAGATAACCCAGTAATAAAAACACCAGCAATACGCCGGTTATCACGCCTGCACTCACAGTGCACCTCCAGTGGCCTAAAAGTGATACCGGAAGGGTAGAATTCTGGCTGCAAAGATTTCGCAAAAATCTGCGGGCGGGGTGTAAAAAAAGTATAAAAATGGCAAAAGCCATGATTTAACTAATGTTTAGTATTAATTTAACTTTTGTGTAACT  >  NC_000913/728500‑728977

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.