| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 3,720,136 | IS3 (–) +3 bp :: +TCA | coding (88‑90/213 nt) | cspA → | cold shock protein CspA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 315229 = | NA (NA) | 43 (0.760) +TCA |
42/484 | 0.2 | 100% | noncoding (1/1255 nt) | IS3 | repeat region |
| ? | NC_000913 | 3720136 = | 0 (0.000) | coding (88/213 nt) | cspA | cold shock protein CspA | |||||
| * | ? | NC_000913 | = 2171428 | NA (NA) | 50 (0.870) | 42/488 | 0.2 | 100% | noncoding (1258/1258 nt) | IS3 | repeat region |
| ? | NC_000913 | = 3720138 | 0 (0.000) | coding (90/213 nt) | cspA | cold shock protein CspA | |||||
GAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGGCGCAAGCCTGATGTATGAACAGTATTATGGCGATGAAGTCGGGCTGTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCAAAATCAGCAGACGTCTTCT > NC_000913/314980‑315470 | tattcttcacaaaaataataatagattttattacgcgatcgattatttatttcctgaaaacaaataaaaaaatccccgccaaatggcagggatcttagattctgtgcttttaagcagagattacaggctggttacgttaccagctgccgggcctttagcgccgctttcgatggtgaaggacactttctgaccttcgtccagagatttgtaaccatcgttctggttagcagagaagtgtacgaacaatgaTc < 1:411310‑M1/2‑1 (MQ=255) tcttcacaaaaataataatagattttattacgcgatcgattatttatttcctgaaaacaaataaaaaaatccccgccaaatggcagggatcttagattctgtgcttttaagcagagattacaggctggttacgttaccagctgccgggcctttagcgccgctttcgatggtgaaggacactttctgaccttcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCtt < 1:428009‑M1/4‑1 (MQ=255) cttcacaaaaataataatagattttattacgcgatcgattatttatttcctgaaaacaaataaaaaaatccccgccaaatggcagggatcttagattctgtgcttttaagcagagattacaggctggttacgttaccagctgccgggcctttagcgccgctttcgatggtgaaggacactttctgaccttcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTAc < 1:385091‑M1/6‑1 (MQ=255) ataataatagattttattacgcgatcgattatttatttcctgaaaacaaataaaaaaatccccgccaaatggcagggatcttagattctgtgcttttaagcagagattacaggctggttacgttaccagctgccgggcctttagcgccgctttcgatggtgaaggacactttctgaccttcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAAt < 1:442818‑M1/14‑1 (MQ=255) agaatttattacgcgatcgattatttatttcctgaaaacaaataaaaaaatccccgccaaatggcagggatcttagattctgtgcgtttaagcagagattacaggctggttacgttaccagctgccgggcctttagcgccgctttcgatggtgaaggacactttctgaccttcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAATAGTGGACAcg > 1:305262‑M1/228‑251 (MQ=255) ttttattacgcgatcgattatttatttcctgaaaacaaataaaaaaatccccgccaaatggaagggatcttagattctgtgcttttaagcagagattacaggctggttacgttaccagctgccgggcctttaccgccgctttcgatggtgaaggacactttctgaccttcgtccagagctttgtaaccatcgttctggatagccgagaattgtacgaacactgaTCTTACCCAGCACTAGTGGAAACGCgg < 2:346913‑M1/27‑1 (MQ=255) tttattacgcgagcgattatttatttccggaaaacaaataaaaaaatccccgccaaatggcagggatcttagattctgtgcttttaagcagagattacaggctggttacgttaccagctgccgggcctttagcgccgctttcgatggtgaaggacactttctgaccttcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAATAGTGGACACGCgg > 1:315719‑M1/224‑250 (MQ=255) tattacgcgatcgattatttatttcctgaaaacaaataaaaaaatccccgccaaatggcggggatcttagattcggtgcttttaagcagagattacaggctggttacgttaccagctgccgggcctttagcgccgctttcgatggtgaaggacactttctgaccttcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAATAGTGGACACGCGGCt > 2:106464‑M1/222‑250 (MQ=255) gcgatcgattatttagttcctgaaaacaaataaaaaaatccccgccaaatggcagggatcttagattatgtgcttttaagcagagattacaggctggttacgttaccagctgccgggcctttagcgccgcattcgatggggaaggacaatttctgcccttcgtccagagctttgtaaccatcgttctggatagcagagaaaggtaagaacactgcTTTTACCCAGCAATAGTGGACAAGCGGCTaagag < 2:252910‑M1/34‑3 (MQ=255) gattatttatttcctgaaaacaaataaaaaaatccccgccaaatggcagggatcttagattctgtgcttttaagcagagattacaggctggttacgttaccagctgccgggcctttagcgccgctttcgatggtgaaggacactttctgaccttcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAAct < 2:139934‑M1/42‑1 (MQ=255) atttcctgaaaacaaataaaaaaatccccgccaaatggcagggatcttagattctgtgcttttaagcagagattacaggctggttacgttaccagctgccgggcctttagcgccgctttcgatggtgaaggacactttctgaccttcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCtcagtc < 1:429042‑M1/49‑1 (MQ=255) tttcctgaaaacaaataaaaaaatccccgccaaatggcagggatcttagattctgtgcttttaagcagagattacaggctggttacgttaccagctgccgggcctttagcgccgctttcgatggtgaaggacactttctgaccttcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCtcagtc < 1:80324‑M1/49‑1 (MQ=255) aacaaataaaaaaatccccgccaaatggcagggatcttagattctgtgcttttaagcagagattacaggctggttacgttaccagctgccgggcctttagcgccgctttcgatggtgaaggacactttctgaccttcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAATAGTGGACACGCGGCTAAGGGGGTAAACTCTCAGTCAGAGGTGACTc < 2:104060‑M1/60‑1 (MQ=255) atccccgccaaatggcagggatcttagattctgtgcttttaagcagagattacaggctggttacgttaccagctgccgggcctttagcgccgctttcgatggtgaaggacactttctgaccttcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAATCGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACaaaaa < 1:116390‑M1/72‑1 (MQ=255) ccccgccaaatggcagggatcttagattctgtgcttttaagcagagattacaggctggttacgttaccagctgccgggcctttagcgccgctttcgatggtgaaggacactttctgaccttcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAAc < 1:143320‑M1/73‑1 (MQ=255) aaatggcagggctcttagattctgtgcttttaagcagagattacaggctggttacgttaccagctgccgggcctttagcgccgctttcgatggtgaaggacactttctgaccttcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTAACCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGAATCACATGACAAAAACAGTATCAAc < 1:125785‑M1/82‑1 (MQ=255) atggcagggatcttagattctgtgcttttaagcagagattacaggctggttacgttaccagctgccgggcctttagcgccgctttcgatggtgaaggacactttctgaccttcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAAcc < 1:44627‑M1/83‑1 (MQ=255) agattctgtgcttttaagcagagattacaggctggttacgttaccagctgccgggcctttagcgccgctttcgatggtgaaggacactttctgaccttcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCg > 1:350425‑M1/154‑250 (MQ=255) ggtgcttttaagcagagattacaggctggttacgttaccagctgccgggcctttagcgccgctttcgatggtgaaggacactttctgaccttcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAg > 2:24776‑M1/148‑251 (MQ=255) tttaagcagagattacaggctggttacgttaccagctgccgggcctttagcgccgctttcgatggtgaaggacactttctgaccttcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCAtt > 1:447159‑M1/142‑249 (MQ=255) agcagagattacaggctggttacgttaccagctgccgggcctttagcgccgctttcgatggtgaaggacactttctgaccttcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTg > 1:62148‑M1/138‑251 (MQ=255) agagattacaggctggttacgttaccagctgccgggcctttagcgccgctttcgatggtgaaggacactttctgaccttcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAAt < 1:277659‑M1/117‑1 (MQ=255) ggcttgttacgttaccagctgccgggcctttagcgccgctttcgatggtgaaggacactttctgaccttcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGGAAAAAACCCCGTAAACAGCATTAGCCTGAATTTCGCAGTGa > 2:385091‑M1/125‑251 (MQ=255) gttacgttaccagctgccgggcctttagcgccgctttcgatggtgaaggacactttctgaccttcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTc > 2:86697‑M1/120‑228 (MQ=255) gttacgttaccagctgccgggcctttagcgccgctttcgatggtgaaggacactttctgaccttcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTc < 1:86697‑M1/109‑1 (MQ=255) ctgccgggcctttagcgccgctttcgatggtgaaggacactttctgaccttcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTg < 1:185484‑M1/144‑1 (MQ=255) cggtcctttagcgccgctttcgatggtgaaggacactttctgaccttcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTAGCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTGCGCAGTGAAGCCCTGAAGCTTGCTGAACGc > 2:169598‑M1/103‑251 (MQ=255) agcgccgctttcgatggtgaaggacactttctgaccttcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGtt < 2:415194‑M1/158‑1 (MQ=255) atggtgaaggacactttctgaccttcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGccc < 2:119155‑M1/171‑1 (MQ=255) tgaaggacactttctgaccttcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTg < 1:182300‑M1/174‑1 (MQ=255) actttctgaccttcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGAAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCCTGCTGAACGCATNGGTGTTACTGCCGCAGCCCGTGAACTCAGcc < 2:214668‑M1/183‑1 (MQ=255) gaccttcgtccagagatttgtaaccatcgttctggatagcagagaagagtacgaacactgaTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAAcc < 1:385239‑M1/83‑1 (MQ=255) gaccttcgtccagagaattgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATCACAAAAACAGTATCAAcc > 2:385239‑M1/62‑144 (MQ=255) accttcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGACTTTCGCAGTGAAGCCCTGAAGCTTGCTGACCGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGa < 1:272311‑M1/190‑1 (MQ=255) tcgtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACGAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATca > 2:313875‑M1/57‑250 (MQ=255) gtccagagatttgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAATCGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACACAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGCAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGCATcaca < 2:161288‑M1/196‑1 (MQ=255) agatttgtaaccatagttctggatagcagagaagagtacgaacactgaTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGAGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCacaactatac < 1:132317‑M1/203‑5 (MQ=255) tgtaaccatcgttctggatagcagagaagtgtacgaacactgaTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACt > 1:275280‑M1/44‑250 (MQ=255) cttccgatctgtacgaacactgaTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCAAAATc < 1:96046‑M1/228‑1 (MQ=255) agagaagtgtacgaacactgaTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCAAAATcag > 2:113421‑M1/22‑251 (MQ=255) gaagtgtacgaacactgaGCTTACCCAGCAATAGTTGACACGCGGCTAAGTGAGGAAACTCTCAGTCAGAGTTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACGCTACAACTGGCGCAGTAAACAGCAAAATcagcag > 2:86416‑M1/19‑251 (MQ=255) tgtacgaacactgaTCTTACCCAGCAATATTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCCGTAAACAGCAAAATCAGCAGAcgg < 2:139979‑M1/237‑2 (MQ=255) gaacactgaTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCCAAATCAGCAGACGtcttct < 1:217241‑M1/242‑1 (MQ=255) | GAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGGCGCAAGCCTGATGTATGAACAGTATTATGGCGATGAAGTCGGGCTGTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCAAAATCAGCAGACGTCTTCT > NC_000913/314980‑315470 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |