Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 3,927,155 Δ12,222 bp [asnA]–[hsrA] [asnA], viaA, ravA, kup, rbsD, rbsA, rbsC, rbsB, rbsZ, rbsK, rbsR, [hsrA]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3927155 3939376 12222 45 [0] [0] 45 [asnA]–[hsrA] [asnA],viaA,ravA,kup,rbsD,rbsA,rbsC,rbsB,rbsZ,rbsK,rbsR,[hsrA]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 39271540 (0.000)45 (0.780) 41/490 0.2 100% intergenic (‑151/‑1) asnC/asnA DNA‑binding transcriptional dual regulator AsnC/asparagine synthetase A
?NC_000913 3939377 = 0 (0.000)coding (1236/1428 nt) hsrA putative transporter HsrA

GCCAAATTGTTTCGCCAGTTCGGCGTAAGCGGTGCGCGCATTGCCCATTAATGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3926905‑3927154
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGT  >  NC_000913/3939377‑3939625
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
GCCAAATTGTTTCGCCAGTTCGGCGTAAGCGGTGCGCGCATTGCCCATTAATGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAG                                                                                                                                                                                                                                                           <  1:13346/251‑1
                       CGTAAGCGGTGCGCGCATTGCCCATTAATGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCGATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTAGTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAA                                                                                                                                                                                                                                    <  1:400158/251‑1
                          AAGCGGTGCGCGCATTGCCCATTAATGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACT                                                                                                                                                                                                                                 <  1:205650/251‑1
                               GTGCGCGCATTGCCCATTAATGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCG                                                                                                                                                                                                                            <  1:117715/251‑1
                                 GCGCGCATTGCCCATTAATGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCTGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGAC                                                                                                                                                                                                                          <  1:195062/251‑1
                                       ATTGCCCATTAATTCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTGTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGC                                                                                                                                                                                                                    <  1:173460/251‑1
                                                                          GATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGC                                                                                                                                                                                >  2:312916/1‑251
                                                                           ATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCA                                                                                                                                                                               <  1:204316/251‑1
                                                                                 GATCAGATAAATTTCCATAGGACTTTCTTATGTGGGTTGATGATTCATTCTATTTTAGCATTCTTTTTTAATGAATCAAAAGCGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGTCAGTTGCTGCGGAACCGCCAGAA‑ACATGTTACCACTGCTGGAATTGTt                                                                                                                                                                          >  2:176146/1‑249
                                                                                     AGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGAGTCATTCTATTTTAGCCTTCTCTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTACTCATAAGCAACAGAACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGTCAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGGTGCTGGCATTGTCATCGG                                                                                                                                                                     <  2:372209/251‑1
                                                                                              TCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTC                                                                                                                                                                   >  1:416359/1‑244
                                                                                                        ttttTTATGCGTATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGA                                                                                                                                                   <  1:165770/246‑1
                                                                                                        TTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGA                                                                                                                                                   <  2:127456/250‑1
                                                                                                                         TGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGATTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTA                                                                                                                                  >  1:651/1‑250
                                                                                                                                        TAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATA                                                                                                                   <  1:93743/250‑1
                                                                                                                                             TTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAATAAAGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGCATTCATCGCGGAAAACTGCGTCGACATAGCCATC                                                                                                             >  1:417898/1‑251
                                                                                                                                              TCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCAT                                                                                                              <  2:39962/249‑1
                                                                                                                                                 TTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGGGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCC                                                                                                            <  2:308732/248‑1
                                                                                                                                                           ATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAA                                                                                               <  1:322372/251‑1
                                                                                                                                                             CAAAAGTGGGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACG                                                                                             <  1:158686/251‑1
                                                                                                                                                             CAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACG                                                                                             >  1:329415/1‑251
                                                                                                                                                             CAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACG                                                                                             >  1:95109/1‑251
                                                                                                                                                                  GTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAG                                                                                        <  2:326095/251‑1
                                                                                                                                                                   TGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTACTCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCACGTGTGATGGTATTCATCGCGGTAAACTGCGCCGACATAGCCATCCCTAATATAAACAACGGCAcg                                                                                        >  2:267939/1‑248
                                                                                                                                                                        TAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTACTATAAACAACGGCAAGATCAGC                                                                                  >  1:453722/1‑251
                                                                                                                                                                              TTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCA                                                                             <  1:333703/250‑1
                                                                                                                                                                                TTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATA                                                                           <  2:329195/250‑1
                                                                                                                                                                                TTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATA                                                                           <  2:254640/250‑1
                                                                                                                                                                                      AATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGACGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGACATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCAT                                                                    >  2:73912/1‑251
                                                                                                                                                                                                 CATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATT                                                         >  2:321654/1‑251
                                                                                                                                                                                                           GGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCTCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAA                                               <  1:72220/251‑1
                                                                                                                                                                                                           GGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTC                                                                                                                         <  1:182518/177‑1
                                                                                                                                                                                                           GGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTC                                                                                                                         >  2:182518/1‑177
                                                                                                                                                                                                              TTTTGTTGCTTAATCATAATCAACAGGACGCAGGAGTATAAAAAGGCCTCACTTACAGCAACGCTTAAACTAATCGACAGTTGCTGCGTGACCGGCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACT                                             <  1:307047/250‑1
                                                                                                                                                                                                                  GTTGCTTAATTATAAGCAACAGGACGCAGTAGTATAAAAAGTCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCGGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTTATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGC                                         <  2:291629/250‑1
                                                                                                                                                                                                                  GTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCG                                        <  1:394599/251‑1
                                                                                                                                                                                                                               AAGCAACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGGCAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCCAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAA                           <  2:119018/251‑1
                                                                                                                                                                                                                                   AACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCAT                                                                                <  1:70954/194‑1
                                                                                                                                                                                                                                   AACAGGACGCAGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCAT                                                                                >  2:70954/1‑194
                                                                                                                                                                                                                                             AGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCC                                                                                                            <  1:45614/156‑1
                                                                                                                                                                                                                                             AGGAGTATAAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCC                                                                                                            >  2:45614/1‑156
                                                                                                                                                                                                                                                     AAAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCATAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAA     <  1:291578/251‑1
                                                                                                                                                                                                                                                      AAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAAC    <  1:153389/251‑1
                                                                                                                                                                                                                                                      AAAAGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAAC    >  2:62601/1‑251
                                                                                                                                                                                                                                                         AGGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGATGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCACTAATCACCGTGATCCCCACTAACGT  >  1:227957/1‑250
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
GCCAAATTGTTTCGCCAGTTCGGCGTAAGCGGTGCGCGCATTGCCCATTAATGCTTCCAGGATGCCACGGTCCAGATTGTCGATCAGATAATTTTCCATAGGATTTTCTTATGCGGATTGATGATTCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3926905‑3927154
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCCGCACTTACAGCAACGCCTAAACTAATCGACAGTTGCTGCGTGACCGCCAGAACAC‑TGTTACCGCTGCTGGCATTGTCATCGGTCAGATCGGCAAGTGTGATGGTATTCATCGCGGTAAACTGCGTCGACATAGCCATCCCTAATATAAACAACGGCAAGATCAGCATCCATATAGCCATTGCTGGTGATTGCAAAGAGAACTGAGCGATCATTAGCCCAATAATCACCGTGATCCCCACTAACGT  >  NC_000913/3939377‑3939625

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.