Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,985,816	T→C	intergenic (‑224/‑31)	yqeF ← / → yqeG	putative acyltransferase/putative transporter YqeG

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,985,816	0	T	C	100.0%	200.1 / NA	55	intergenic (‑224/‑31)	yqeF/yqeG	putative acyltransferase/putative transporter YqeG
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (35/20);  total (35/20)

CGTCTTTCATCACAACCTCGCACCAATTAACAGTGCAATAGTAAATGATTGTTAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAAGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTTTGTTTAATTTGTAGATGATACGTTCAGATAATGTCTAATATTTGGTCTAAAGAAGAAACTCTGTGGAGTTTCGCGCTCTACGGCACAGCCGTTGGTGCAGGCACGCTCTTCCTTCCTATTCAGTTAGGTTCGGCAGGGGCTGTGGTCCTGTTTATTACTGCTCTGGTCGCCTGGCCTTTAACATATTGGCCACATAAAGCCTTGTGCCAGTTCATCCTCTCATCAAAAACATCAGCAGGTGA  >  NC_000913/2985583‑2986058                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                   cGTCTTTCATCACAACCTCGCACCAATTAACAGTGCAATAGTAATTGATTGTTAATTACCGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATAACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTCACCCACCAATAGAGGGTTAAATAGGGCGTTAATCTCCCCTCCTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAgatg                                                                                                                                                                                                                                   >  2:256693/1‑251 (MQ=255)                  ccgCACCAATTAACAGTGCAATAGTAAATGATTGTTAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCGCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaac                                                                                                                                                                                                                  <  2:171863‑M1/250‑10 (MQ=255)                      aCCAATTAACAGTGCAATAGTAAATGATTGTTAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccg                                                                                                                                                                                                              <  1:166819‑M1/251‑14 (MQ=255)                      aCCAATTAACAGTGCAATAGTAAATGATTGTTAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccg                                                                                                                                                                                                              >  1:379431‑M1/1‑238 (MQ=255)                             aaCAGTGCAATAGTAAATGATTGTTAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttg                                                                                                                                                                                                       <  1:175444‑M1/251‑21 (MQ=255)                             aaCAGTGCAATAGTAAATGATTGTTAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacattt                                                                                                                                                                                                        <  2:263248‑M1/250‑20 (MQ=255)                                    cAATAGTAAATGATTGTTAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggt                                                                                                                                                                                                >  1:91568‑M1/1‑224 (MQ=255)                                          tAAATGATTGTTAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggatgtg                                                                                                                                                                                            >  2:402375‑M1/1‑218 (MQ=255)                                                     tAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaa                                                                                                                                                                                <  1:14222‑M1/250‑44 (MQ=255)                                                          aCAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggtgttgtgagcataacgtaatgctt                                                                                                                                                                           >  2:91158‑M1/1‑202 (MQ=255)                                                          aCAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgctt                                                                                                                                                                           >  1:123436‑M1/1‑202 (MQ=255)                                                            agatatcTTAATTGATTAAAAAAAGTGAGTTTTATCACCAAGGAAATATGCCTGATCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCACCCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGGTTGTGTTAAATTGCCCTCCATTCTGTTTAATTAGTAGATGATACGTTCaaaagaacccccgacatttgccggggttgtgagcataacgtaatgcttatt                                                                                                                                                                        >  2:1862‑M1/4‑200 (MQ=255)                                                            aGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAAttt                                                                                                                                                                                                                                          >  1:441864/1‑185 (MQ=255)                                                            aGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgggcataacgtaatgcttatt                                                                                                                                                                        <  2:129032‑M1/251‑52 (MQ=255)                                                            aGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttatt                                                                                                                                                                        <  2:157856‑M1/251‑52 (MQ=255)                                                            aGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATGCTGTTTAAttt                                                                                                                                                                                                                                          <  2:441864/185‑1 (MQ=255)                                                                       ttGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccagacgc                                                                                                                                                             >  2:465624‑M1/1‑189 (MQ=255)                                                                            tAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgc                                                                                                                                                        >  2:173572‑M1/1‑184 (MQ=255)                                                                            tAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttatt                                                                                                                                                                        >  2:116800‑M1/1‑184 (MQ=255)                                                                            tAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttatt                                                                                                                                                                        <  1:116800‑M1/235‑52 (MQ=255)                                                                                 aaaGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccggg                                                                                                                                                    >  1:259956‑M1/1‑179 (MQ=255)                                                                                   aGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCGACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggacc                                                                                                                                                 >  1:309280‑M1/1‑177 (MQ=255)                                                                                   aGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggccgcatcgccgggcac                                                                                                                                                 >  1:249887‑M1/1‑177 (MQ=255)                                                                                    gTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaac                                                                                                                                                 >  1:401701‑M1/1‑176 (MQ=255)                                                                                      gATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacag                                                                                                                                               <  1:397094‑M1/250‑77 (MQ=255)                                                                                               cacaAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttancggacgcatcgccgggaacagaataacgtcg                                                                                                                                     >  2:226337‑M1/1‑165 (MQ=255)                                                                                                 caAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGAAGATAGGGCGTTAATCTCCCATACTTAACATGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaacaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtagcg                                                                                                                                   >  1:442093‑M1/1‑163 (MQ=255)                                                                                                    aGGAAATATGCCTGAGCATCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggat                                                                                                                                >  2:409510‑M1/1‑160 (MQ=255)                                                                                                             gCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCGACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggct                                                                                                                       <  2:309280‑M1/251‑101 (MQ=255)                                                                                                                 gAGCAGCAGTCAGAGACATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttg                                                                                                                   >  1:6149‑M1/1‑147 (MQ=255)                                                                                                                           cAGAAACATAACTGGCACGTAGGGTTTGCAACCACTAACCCGCCAATAGAGGGGGATATAGTGCGTTAATCCCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGGACtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacttcgcggagggtatggctgttggtgaacagc                                                                                                          <  2:442093‑M1/250‑114 (MQ=255)                                                                                                                               gaCATAACTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATCGGGCGTTAATCTCCCATACTTAACCTGGATTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggctggtatggctgttggtgaacagcatta                                                                                                      >  2:494679‑M1/1‑133 (MQ=255)                                                                                                                                    aaCTGGCACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatac                                                                                                <  1:173572‑M1/251‑124 (MQ=255)                                                                                                                                          cACGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGTTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccgggcttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgctggtgaacagcattaccctacggtcgt                                                                                          >  2:206367‑M1/1‑122 (MQ=255)                                                                                                                                           aCGTAGGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgat                                                                                         >  1:220378‑M1/1‑121 (MQ=255)                                                                                                                                             gtagtgtttgcCAACACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCAATTCTGTTTAATTTGTAGATGATACGTTCtaaacaaaccccgacatttgacggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaccagcataaccatacgatcgatac                                                                                       >  2:454396‑M1/6‑119 (MQ=255)                                                                                                                                                      gCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattccc                                                                               >  1:247390‑M1/1‑110 (MQ=255)                                                                                                                                                      gCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattccc                                                                               <  1:152983‑M1/250‑141 (MQ=255)                                                                                                                                                         aCCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATATCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccctacggtcgataccaattcccagac                                                                           >  1:191049‑M1/1‑107 (MQ=255)                                                                                                                                                                aCCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcgtaacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaacatacggtcgataccaattcccagacctgctgt                                                                    >  1:481420‑M1/1‑100 (MQ=255)                                                                                                                                                                    accaATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTATCCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgctgatgttatggctggtggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggc                                                                <  1:199457‑M1/251‑156 (MQ=255)                                                                                                                                                                                      aGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccatgttccagg                                              >  1:238699‑M1/1‑78 (MQ=255)                                                                                                                                                                                                   cccATACTTAACCTGGTTTATGGTAAATTGNCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccatgttccagtgcggtgacgtaa                                  <  2:238699‑M1/250‑186 (MQ=255)                                                                                                                                                                                                           tAACCTGGTTTATGGTAAATTGCCCGCCATNCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgcctgggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccatgttccagtgcggtgacgtaatcttcatc                          <  2:240984‑M1/250‑194 (MQ=255)                                                                                                                                                                                                            aaCCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccatgttccagtgcggggacgtaatcttcatcgt                        >  1:368863‑M1/1‑56 (MQ=255)                                                                                                                                                                                                            aaCCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGGAGATGATACGTTCtaaaaaaaccccggcatttgccggggttgtgggcatagcgtagtgcttcttttaccggacgcatcgccgggaacagaataacggcgcggatggtatcgctgttggtgagaagcattaccatacggtcgataacaattcacagacctgctgtcggcgggaacccatgttccagagcggtgacgtactctgcatcgt                        >  1:462040‑M1/1‑56 (MQ=255)                                                                                                                                                                                                             aCCTGGTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccatgttccagtgcggtgacgtaatcttcatcgta                       <  2:401701‑M1/251‑197 (MQ=255)                                                                                                                                                                                                                  gTTTATGGTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccctgttccagtgcggtgacgtaattttcatcgcagaac                   >  2:286063‑M1/1‑50 (MQ=255)                                                                                                                                                                                                                        ggTAAATTGCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaatgcccagacctgctgtcggcggtaagccatgttccagtgcggtgacgtaatcttcatcgtagaacatcgctt            <  2:271255‑M1/251‑208 (MQ=255)                                                                                                                                                                                                                           aaaTTGCCCTCCATTCTGTTTAATTTGTAGATGATACGCTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgcagtcggcgttaaaccatgttccaatgcgggggcccaatcttcatcgtagaacaaccattcgg         >  2:125348‑M1/1‑41 (MQ=255)                                                                                                                                                                                                                                gCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccacttcccagacctgctgtcggcggtaagccatgttcccaggcggttacgtaatcttaatcgtagaacatcgcttcgtcgtc     >  2:45320‑M1/1‑36 (MQ=255)                                                                                                                                                                                                                                gCCCTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccatgttccagtgcggtgacgtaatcttcatcgtagaacatcgcttcgtcgtc     >  1:451084‑M1/1‑36 (MQ=255)                                                                                                                                                                                                                                  ccTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccatgttccagtgcggtgacgtaatcttcatcgtagaacatcgcttcgtcgtcacc  >  1:171614‑M1/1‑34 (MQ=255)                                                                                                                                                                                                                                   cTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccatgt                                                    >  2:288667‑M1/1‑33 (MQ=255)                                                                                                                                                                                                                                   cTCCATTCTGTTTAATTTGTAGATGATACGTTCtaaaaaaaccccgacatttgccggggttgtgagcataacgtaatgcttattttaccggacgcatcgccgggaacagaataacgtcgcggatggtatggctgttggtgaacagcattaccatacggtcgataccaattcccagacctgctgtcggcggtaagccatgt                                                    <  1:288667‑M1/200‑168 (MQ=255)                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                   CGTCTTTCATCACAACCTCGCACCAATTAACAGTGCAATAGTAAATGATTGTTAATTACAGTTATCTTAATTGTTTAAAAAAAGTGATTTTTATCACAAAGGAAATATGCCTGAGCAGCAGTCAGAGACATAACTGGCACGTAAGGTTTGCAACCACTAACCCACCAATAGAGGGGTAGATAGGGCGTTAATCTCCCATACTTAACCTGGTTTATGGTAAATTGCCCTCCATTTTGTTTAATTTGTAGATGATACGTTCAGATAATGTCTAATATTTGGTCTAAAGAAGAAACTCTGTGGAGTTTCGCGCTCTACGGCACAGCCGTTGGTGCAGGCACGCTCTTCCTTCCTATTCAGTTAGGTTCGGCAGGGGCTGTGGTCCTGTTTATTACTGCTCTGGTCGCCTGGCCTTTAACATATTGGCCACATAAAGCCTTGTGCCAGTTCATCCTCTCATCAAAAACATCAGCAGGTGA  >  NC_000913/2985583‑2986058

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑