| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,622,250 | 0 | A | G | 30.0% | 70.4 / 10.0 | 40 | E161G (GAG→GGG) | yjjJ | toxin YjjJ |
| Reads supporting (aligned to +/- strand): ref base A (3/25); new base G (12/0); total (15/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.14e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTT‑GGTCGGGGAGGGGAATTATCAGC‑GATGGATTACTGCACAAC‑ACCCTGCGG‑AAATTCCTCTGGATCA‑AAAACTCACCCATTACGAACAGCTGGCAAGTGATGCACTGGCAGGAG‑AAATTGTGGGTTCTTCTGCGG‑GCGGCGAGCA‑GCCAAAATTTACCTACTAT‑GCACAAACGCCGTCAGGCAATAAACATGTGTTGGTGAAATTCACCGTACCACAGCAAACCGCGGTCAGCCAACGTTGGGGTGACC > NC_000913/4622005‑4622489 | ccGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTT‑GGTCggggagggg < 1:374954/250‑1 (MQ=255) gCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGCTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTT‑GGGCGGGGGGGGGGATTATc > 1:63948/1‑249 (MQ=255) gCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGAGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTT‑GGTCGGGGAGGGGAATTATCAGC‑GATGGa < 1:85185/251‑1 (MQ=255) gcTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTAGTTAACGGTGAATATACTGGCGGTTGGTT‑GGTCGGGGAGGGTAATTATCAGC‑GATGGATTACTGCacaac < 1:431395/250‑1 (MQ=255) gcgcAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTT‑GGTCGGGGAGGGGAATTATCAGC‑GATGGATTACTGCACAAC‑ACCCTGCGG‑aa < 1:85747/251‑1 (MQ=255) ggTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGGT‑GGGTGGGGGGGGGAATTATCAAC‑GATGGGTTAATGGCCAACCACCC‑GCGG‑GAATTTCTCTGGGTCA‑AAAACTc > 2:299775/1‑251 (MQ=255) ttGCACTGGTAGTTGATCGATGTCCGACCGCAGGGCTTTTTAGGGCGGGTGTGGGGCAGGAAGTGTGCTGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCGCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTT‑GGTCGGGGAGGGGAATTATCAGC‑GATGGATTACTGCACAAC‑ACACTGCGG‑AAATGCCTCTGGATCA‑AAAACTCACCCATTACg < 2:346113/250‑1 (MQ=255) aTTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTT‑GGTCGGGGGGGGGGATTATCAAC‑GGTGGATTACTGCACAAC‑ACCCCTCGG‑GAATTACTCTGGGTCA‑AAAACTCCCCCCTTACGAACaaacggc > 1:110079/1‑244 (MQ=255) ccGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCCACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGAT‑TGTCGGGGGGGGGGATTATCAGC‑GATGGATTTATGCCCAAC‑ACCCCGCGG‑AAATTTCTCTGGATCA‑AAAAATCACCCCTTAAGAACAACTgggaaagggt > 1:283684/1‑243 (MQ=255) gATCTCCGACCGCAGGGCTTTTTAGAGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTTATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGGTGGTT‑GGTTGGGGGGGGGAAATATCAGCCAATGG‑TTACTGCACAAC‑CCCCCGCGG‑AAAATTCTCTGGAACACAAAAC‑CACCCAttcacaaccgctggaaagggatgc > 1:377738/1‑229 (MQ=255) ccGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTT‑GGTCGGGGAGGGGAATTATCAGC‑GATGGATTACTGCACAAC‑ACCCTGCGG‑AAATTCCTCTGGATCA‑AAAACTCACCCATTACGAACAGCTGGCAAGTGAt < 2:110079/244‑1 (MQ=255) ccGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTT‑GGTCGGGGAGGGGAATTATCAGC‑GATGGATTACTGCACAAC‑ACCCTGCGG‑AAATTCCTCTGGATCA‑AAAACTCACCCATTACGAACAGCTGGCAAGTGATg < 2:42740/245‑1 (MQ=255) aCCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTT‑GGTCGGGGAGGGGAATTATCAGC‑GATGGATTACTGCACAAC‑ACCCTGCGG‑AAATTCCTCTGGATCA‑AAAACTCACCCATTACGAACAGCTGGCAAGTGATGCACTGGCAg < 1:410639/251‑1 (MQ=255) gCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTT‑GGTCGGGGAGGGGAATTATCAGC‑GATGGATTACTGCACAAC‑ACCCTGCGG‑AAATTCCTCTGGATCA‑AAAACTCACCCATTACGAACAGCTGGCAAGTGATGCACTGGCAGgag < 2:10917/251‑1 (MQ=255) aGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTT‑GGTCGGGGAGGGGAATTATCAGC‑GATGGATTACTGCACAAC‑ACCCTGCGG‑AAATTCCTCTGGATCA‑AAAACTCACCCATTACGAACAGCTGGCAAGTGATGCACTGGCAGGAG‑aa < 2:461760/251‑1 (MQ=255) aGGGCTTTTTAGGGCGCGCGGGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCGCTGGCAGGAAGAAGATGTGCTCTACGCCCGGACCGTATTTAACGGTGAATATACTGGCGGTTGGGT‑GGTCGGGGAGGGGAATTATCAGC‑GATGGATTACTGCACAAC‑ACCCTGCGG‑AAATTCCTCTGGATCA‑AAAACTCACCCATTACGAACAGCTGGCAAGTGATGCACTGGCAGGAG‑aa < 2:377738/251‑1 (MQ=255) gtcTTTTTAGGGCGCGCGTGGTGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTT‑GGTCGGGGAGGGGAATTATCAGC‑GATGGATTACTGCACAAC‑ACCCTGAGG‑AAATTCCTCTGGATCA‑AAAACTCACCCATTACGAACAGCTGGCAAGTGATGCACTGGCAGGAG‑AAAt < 1:337606/249‑1 (MQ=255) tAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGGT‑GGTCGGGGAGGGGAATTATCAGC‑GATGGGTTACTGCACAAC‑ACCCCGCGGGAAATTC‑TCTGGCTCA‑AAAACACACCCATTACCAACAGCTGGCAAGTGATGCACTGGCAGGAG‑CAATTGTgggg > 1:314489/1‑250 (MQ=255) ggggCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTT‑GGTCGGGGAGGGGAATTAGCAGC‑GATGGATTACTGCACAAC‑ACCCTg < 1:194126/162‑1 (MQ=255) cAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGATGGGT‑GGGCGGGGGGGGGAATTATCAGC‑GGTGGATTTCTGCACAAC‑ACCCCGCGG‑GAATTCCTCTGGATCA‑AAAACTCCCCCCTTACGAACAACCGGCAAATGATGCACAGGCAGGGGGAAATGGTGGGT‑CTTTTgcgg‑gcgggg > 1:470207/1‑249 (MQ=255) gAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTT‑GGTCGGGGAGGGGAATTATCAGC‑GATGGATTACTGCACAAC‑ACCCTGCGG‑AAATTCCTCTGGATCA‑AAAACTCACCCATTACGAACAGCTGGCAAGTGATGCACTGGCAGGAG‑AAATTGTGGGttc < 2:211677/234‑1 (MQ=255) gAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTT‑GGTCGGGGAGGGGAATTATCAGC‑GATGGATTACTGCACAAC‑ACCCTGCGG‑AAATTCCTCTGGATCA‑AAAACTCACCCATTACGAACAGCTGGCAAGTGATGCACTGGCAGGAG‑AAATTGTGGGTTCTTCTGCGG‑GCGGCGagc < 1:147647/251‑1 (MQ=255) tAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGGT‑GGTCGGGGGGGGGGATTATCAGC‑GGTGGGTTAATGCACAAC‑AACCTGCGG‑GAAATCCTCTGGGTCA‑AAAACTCACCCCTTACGAACAGCTGGCAAGAGATGCACTGGCAGGGG‑GAAATGTGGGGTCTTTTGCGG‑GGGGGGGGCA‑Gccc > 1:387231/1‑250 (MQ=255) cgcgCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTT‑GGTCGGGGAGGGGAATTATCAGC‑GATGGATTACTGCACAAC‑ACCCTGCGG‑AAATTCCTCTGGATCA‑AAAACTCACCCATTACGAACAGCTGGCAAGTGATGCACTGGCAGGAG‑AAATTGTGGGTTCTTCTGCGG‑GCGGCGAGCA‑GCCAAAAt < 1:239145/251‑1 (MQ=255) cgcAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTTGGT‑GGTCGGGGGGGGGGATTATTAGA‑GGTGGATTACTGACCAAC‑ACCCTGCGG‑GAATTTCTCTGGATCA‑AAAACTCACCCCTTACGAACAGACGGCAAGGGATGCACTGGCAGGAG‑AAAATGTGGGTTGTTCTGGGG‑GCGGCGGGCC‑GCCCAAAttt > 1:14131/1‑251 (MQ=255) gcAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTT‑GGTCGGGGAGGGGAATTATCAGC‑GATGGATTACTGCACAAC‑TCCCTGCGG‑AAATTCCTCTGGATCA‑AAAACTCACCCATTACGAACAGCTGGCAAGTGATTCACTGGCAGGAG‑AAATTGTGGGTTCTTCTGCGG‑GCGGCGAGCA‑GCCAAAATTTa < 1:202069/251‑1 (MQ=255) aCTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTTTGGT‑GGGGGGGGGGATTATCAGC‑GGTGGGTTTCTGCACAAA‑ACCCCCCGG‑GAAATCCTCTGGGTCA‑AAAAATCACCCATTAAACACAACCGGCAAGGGATGCACTGACAGGAG‑AAAATTTGGGGTGTTTTGCGG‑GGGGGGGGGA‑GCCAAAATTTAccc > 2:318520/1‑250 (MQ=255) ctgactgaTGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTT‑GGTCGGGGGGGGGGATTATCAGC‑GATGGATTACTGCACCAC‑ACCCCGCGG‑AAATTCCTCTTGATCA‑AAAACTCACCCATTAAGAACAACCGGCAAGGGATGCACCCGCAGGGG‑GAAATGTGGGTTCTTTTGCGG‑GGGGCGCGCG‑GCCAAAATTTACCTACTAttc > 2:88117/1‑249 (MQ=255) gatATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTT‑GGTCGGGGAGGGGAATTATCAGC‑GATGGATTACTGCACAAC‑ACCCTGCGG‑AAATTCCTCTGGATCA‑AAAACTCACCCATTACGAACAGCTGGCAAGTGATGCACTGGCAGGAG‑AAATTGTGGGTTCTTCTGCGG‑GCGGCGAGCA‑GCCAAAATTTACCTACTAT‑GCACAAACGcc < 2:495773/251‑1 (MQ=255) gatATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGGT‑GGGCGGGGGGGGGAATTATCAGA‑GATGGGTTTATACACAAC‑AACCCGCCG‑AAATTCCTCTTGGTCA‑AAAACTCACCCATTTAGAACAACCGGCGAGCGGTGCAATGACAGGGG‑AAAGTGTGGGAGTTTCTGCGGTGCG‑AGCGCC‑GCCCAAAATTACCTCCTAT‑GCACAAAcagc > 2:439484/1‑248 (MQ=255) gTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTT‑GGTCGGGGAGGGGGATTTTCAGC‑GATGGATTACTGCACAAC‑ACCCCGCGG‑AAATTCCTCTGGATCA‑AAAACTCACCCATTACGAACAGCTGGCAAGGGATGCACTGGCAGGAG‑AAAATGTGGGGTTTTCTGCGG‑GGGGCGGGGC‑GCCCAAAATTACCTTCACT‑GCACAAACACCGTCAggg > 1:366036/1‑250 (MQ=255) ctGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTT‑GGTCGGGGAGGGGAATTATCAGC‑GATGGATTACTGCACAAC‑ACCCTGCGG‑AAATTCCTCTGGATCA‑AAAACTCACCCATTACGAACAGCTGGCAAGTGATGCACTGGCAGGAG‑AAATTGTGGGTTCTTCTGCGG‑GCGGCGAGCA‑GCCAAAATTTACCTACTAT‑GCACAAACGCCGTCAGGCaa < 1:191538/249‑1 (MQ=255) agaagaTGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTTGTT‑GGTCGGGGGGGGGAATTATCAAC‑GATGGATTTCTGCACAAC‑ACCCCTCGG‑GAATACCTCTTGGTCA‑AAAACTCACCCCTTACGAACACCTGGCCAGTGATGCACTGGCAGGAG‑AAAATGTGGGTTTTTCTGCGG‑GCGGCGCGGACGCCCAAATTTAC‑TCCTAN‑TCACAAACCCCCTCCGGCAAAAAACaactgt > 2:223432/1‑246 (MQ=255) aagaTGTGCGCTGCGCTCTGACCGTATTTATCGGTGAATATACTGGCGGTTGGTT‑GGTCGGGGAGGGGAATTATCAGC‑GATGGATTACTGCACAAC‑ACCCTGCGG‑AAATTCCTCTGGATCA‑AAAACTCACCCATTACGAACAGCTGGCAAGTGATGCACTGGCAGGAG‑AAATTGTGGGTTCTTCTGCGG‑GCGGCGAGCA‑GCGAGAATTTACCTGCTAT‑GCACAAACGCCGTCAGGCAAGAAACATGTGTTg < 1:155096/251‑1 (MQ=255) aCGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTT‑GGTCGGGGAGGGGAATTATCAGC‑GATGGATTACTGCACAAC‑ACCCTGCGG‑AAATTCCTCTGGATCA‑AAAACTCACCCATTACGAACAGCTGGCAAGTGATGCACTGGCAGGAG‑AAATTGTGGGTTCTTCTGCGG‑GCGGCGAGCA‑GCCAAAATTTACCTACTAT‑GCACAAACGCCGTCAGGCAATAAACATGTGTTGGTGAAATTc < 1:27735/248‑1 (MQ=255) aCGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTT‑GGTCGGGGAGGGGAATTAGCAGC‑GATGGATTACTGCACAAC‑ACCCTGCGG‑AAATTCCTCTGGATCA‑AAAACTCACCCATTACGAACAGCTGGCAAGTGATGCACTGGCAGGAG‑AAATTGTGGGTTCTTCTGCGG‑GCGGCGAGCA‑GCCAAAATTTACCTACTAT‑GCACAAACGCCGTCAGGCAATAAACATGTGTTGGTTAAATTc < 1:195664/248‑1 (MQ=255) gCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTT‑GGTCGGGGAGGGGAATTATCAGC‑GATGGATTACTGCACAAC‑ACCCTGCGG‑AAATTCCTCTGGATCA‑AAAACTCACCCATTACGAACAGCTGGCAAGTGATGCACTGGCAGGAG‑AAATTGTGGGTTCTTCTGCGG‑GCGGCGAGCA‑GCCAAAATTTACCTACTAT‑GCACAAACGCCGTCAGGCAATAAACATGTGTTGGTGAAATTCACCGt < 1:299775/251‑1 (MQ=255) gACCGTATTTAACGGTGAATATACTGGCGGTTGGTT‑GGTCGGGGAGGGGAATTATCAGC‑GATGGATTACTGCACAAC‑ACCCTGCGG‑AAATTCCTCTGGATCA‑AAAACTCACCCATTACGAACAGCTGGCAAGTGATGCACTGGCAGGAG‑AAATTGTGGGTTCTTCTGCGG‑GCGGCGAGCA‑GCCAAAATTTACCTACTAT‑GCACAAACGCCGTCAGGCAATAAACATGTGTTGGTGAAATTCACCGTAcc < 1:71574/249‑1 (MQ=255) aTTTAACGGTGAATATACTGGCGGTTGGTT‑GGTCGGGGAGGGGAATTATCAGC‑GATGGATTACTTCCCAAA‑ACCCTGCGG‑AAATTCCTCTGGATCC‑AAAACTCACCCATTACGAACAACTGGCCAGTGATGCAATGGCAGGGG‑GAAATGTGGGGTCTTTTTCGG‑GGGGGGGGCA‑GCCCAAATTTACCTACTATTGCA‑AAACCCCGTCCGGGAATAAACATATGTTGGGGAAATTTACCGGAcccccgcca > 1:146647/1‑243 (MQ=255) aCTGGCGGTTGGTT‑GGTCGGGGAGGGGAATTATCAGC‑GATGGATTACTGCACAAC‑ACCCTGCGG‑AAATTCCTCTGGATCA‑AAAACTCACCCATTACGAACAGCTGGCAAGTGATGCACTGGCAGGAG‑AAATTGTGGGTTCTTCTGCGG‑GCGGCGAGCA‑GCCAAAATTTACCTACTAT‑GCACAAACGCCGTCAGGCAATAAACATGTGTTGGTGAAATTCACCGTACCACAGCAAACCGCGGTCAGCCAAc < 1:318520/250‑1 (MQ=255) gtt‑ggtCGTTGAGGGGAATTATCAGC‑GATGGATTACTGCACAAC‑ACCCTGCGG‑AAAGTCCTCTGGATCA‑AAAACTCACCCATTACGAACAGCTGGCAAGTGATGCACTGGCAGGAG‑AAATTGTGGGTTCTTCTGCGG‑GCGGCGAGCA‑GCCAAAATTTACCTACTAG‑GCACAAACGCCGTCAGGCTATAAACATGGGTTGGTGAAATTCACCGTACCACAGCAAACCGCGGTCAGCCAACGTTGGGGTGAcc < 1:225609/251‑1 (MQ=255) | CCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTT‑GGTCGGGGAGGGGAATTATCAGC‑GATGGATTACTGCACAAC‑ACCCTGCGG‑AAATTCCTCTGGATCA‑AAAACTCACCCATTACGAACAGCTGGCAAGTGATGCACTGGCAGGAG‑AAATTGTGGGTTCTTCTGCGG‑GCGGCGAGCA‑GCCAAAATTTACCTACTAT‑GCACAAACGCCGTCAGGCAATAAACATGTGTTGGTGAAATTCACCGTACCACAGCAAACCGCGGTCAGCCAACGTTGGGGTGACC > NC_000913/4622005‑4622489 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |