| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,185,199 | 0 | T | G | 30.9% | 126.0 / 12.6 | 69 | T35P (ACC→CCC) | thiM | hydroxyethylthiazole kinase |
| Reads supporting (aligned to +/- strand): ref base T (8/39); new base G (20/1); total (29/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.69e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GTTCATGACAAAAATGGCGGCGATAATCGAGCGCACCCACCGCTACTGGATCAAGCGTCCAGGGTGTTTGAGAGCTTTTTGCTTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑AAAAAGGTGTAACGCGTGCGCAGATTGCGCT‑GAACCCAGCAGGTCGACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATG > NC_000913/2184956‑2185440 | gTTCATGACAAAAATGGCGGCGATAATCGAGCGCACCCACCGCTACTGGATCAAGCGTCCAGGGTGTTTGAGAGCTTTTTGCTTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGcacc < 1:116312/251‑1 (MQ=255) gcATGACAAAAATGGCGGCGTTAATCGAGCGCACCCGCCGCTACGGGATCAAGCGTCCAGGGTGTTGGAGAGCTTTTTGCTTGCTCAACGGCATCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑G‑TTGcacca < 2:125217/249‑1 (MQ=255) cATGACAAAAAGGGCGGCGATAATCGAGCGCACCCACCGCTACTGGATCAAGCGTCCAGGGTGGTTGAGAGCTGTTTGCTTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGcaccac < 2:387436/250‑1 (MQ=255) cAAAAATGGCGGCGTTAATCGGGCGCACCCACCGCTACTGGATCAAGCGTCCAGGGTGTTTGAGAGCTTTTTGCTTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑Att < 2:164813/251‑1 (MQ=255) aaaaaTGGCGGCGATAATCGAGCGCACCCACCGCTACTGGATCAAGCGTCCAGGGTGTTTGAGAGCTTTTTGCTTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GGGT‑TTAC‑CCACATC‑Attt > 1:411806/1‑250 (MQ=255) aaaaTGGCGGCGATAATCGAGCGCACCCACCGCTACTGGATAAAGCGTCCAGGGTGTTTGAGAGCTTTTTGCTTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑AG‑G‑TTGGACCAcatacttgg > 2:312438/1‑245 (MQ=255) aaaTGGCGGCGATAATCGAGCGCACCCACCGCTACTGGATCAAGCGTCCAGGGTGTTTGAGAGCTTTTTGCGTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGt < 2:173395/251‑1 (MQ=255) aaTGGCGGGGATAATCGAGCCCCCCCCCCGCTACTGGATCAAGCGTCCAGGGTGTTTGAGAGCTTTTTGCTTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTc < 2:414104/251‑1 (MQ=255) gcggcgATAATCGAGCGCACCCACCGCTACTGGATCAAGCGTCCAGGGTGTTTGAGAGCTTTTTGCTTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGc < 1:210100/251‑1 (MQ=255) gcgATAATCGAGCGCACCCCCCGCTACTGGATCAAGCGTCCAGGGTGTTTGAGAGCTTTTTGCTTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGt < 2:444680/251‑1 (MQ=255) gATAATCGAGCGCACCCACCGCTACTGGATCAAGCGTCCAGGGTGTTTGAGAGCTTTTTGCTTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGc < 1:397293/251‑1 (MQ=255) aTCGAGCGCACCCACCGCTACTGGATCAAGCGTCCAGGGTGTTTGAGAGCTTTTTGCTTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑G‑TTGGCCCACATCCATTggcgtgccgggccca > 1:192588/1‑237 (MQ=255) cgcACCCACCGCTACTGGATCAAGCGTCCAGGGTGTTTGAGAGCTTTTTGCTTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑Agggg < 1:393754/251‑1 (MQ=255) caccGCTACTGGATCAAGGTTCCAGGGTGTTTGAGAGCTTTTGGCTTGCGCAACGGCAGCCCGCATCGTCTGAGCGCGTGGCGGCCTCAGTTTGCCAACGTTAATCAACAAGGAACTGGCGATAGCCGCAAACTGACGGGCCTCTTCGTTTTCGATAACCAGCGCTGGCGATGCACCGAGCGCCAGCAGGGTATTGGCGGGAAA‑GA‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGtt < 2:386460/251‑1 (MQ=255) caccGCTACTGGATCAAGCGTCCAGGGTGTTTGAGAGCTTTTTGCTTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGCTAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGCAAA‑GG‑G‑TTGGCCCACATC‑NCTGGTccatacgtgcgacacaggggggtggt > 2:219488/1‑226 (MQ=255) gCTACTGGATCAAGCGTCCAGGGTGTTTGAGAGCTTTTTGCTTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑G‑TTGCACCACATC‑CTTGGGCA‑TGCAGTGCGCAAG‑AGGGGGATGTTgggg > 1:60727/1‑249 (MQ=255) aCTGGATCAAGCGTCCAGGGTGTTTGAGAGCTTTTTGCTTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑aaa < 1:326288/251‑1 (MQ=255) tCAAGCGTCCAGGGTGTTTGAGAGCTTTTTGCTTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTGAA‑GG‑G‑TTGGACCACAGC‑CTTGGGCAGTG‑AGTGCACAAG‑AGGGGGAGGTTGGGG‑GAAAAgggg > 1:344732/1‑249 (MQ=255) cAAGCGTCCAGGGTGGTTGAAAGCTTTGTGCTTGCTCAACGGCAGCCCGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGAGAGCCGCAAACTGACTGGCCTCTGCGGTTTCGATAACCAGCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑AAAAAGgtgt < 1:138853/251‑1 (MQ=255) gagaGCTTTTTGCTTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑AG‑T‑TTGGCCCCCATC‑CTTGGGCA‑TGCAGTGGACAAGGAGGGGA‑TGTTGGGG‑GAAAAGgtggctcggtttgggtttcgtt > 1:89786/1‑232 (MQ=255) gcttgctCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑AAAAAGGTGTAACGCGTGCGCAGATTGCGCT‑GAACCca < 2:84163/250‑1 (MQ=255) tgctCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑AAAAAGGTGTAACGCGTGCGCAGATTGCGCT‑GAACCcagc < 1:79463/249‑1 (MQ=255) ccAACGGCCGCACGCATCGCCTGAGCGGGTGGGTGCGGCAGTGTTCCCACGTGAAGCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTTGCGGGAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAT‑AGGTGAATGTTGGTG‑AAAAAGGTGTAACGCGTACGCAGATTGCTCT‑GAACCCAGCAGGTc < 2:20104/250‑1 (MQ=255) cAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑AAAAAGGTGTAACGCGTGCGCAGATTGCGCT‑GAACCCAGCAGGTc < 1:473489/250‑1 (MQ=255) aaCGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑G‑TTTCACCCCAAC‑ATTGGTCA‑TGCAGTGCCCAAG‑AGGGGGATGGTGGTG‑AAAAAGGTGTAACCCGCGCGCAGATTTCGCC‑GAAACCCGCAgggcgg > 1:69813/1‑247 (MQ=255) agcaCGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑G‑TTGCACCACATC‑ATTGGTCA‑TGCAGGGCACAAG‑AGGGGGATGTTGGGG‑AAAAAGGGGTAACGCGTGCGCAGATTGGGCT‑GAACCCAGCAGGGCGGCTTGc > 1:192385/1‑250 (MQ=255) aaCGCATCGCCTGGGCGCGGGGCGGCGTCAGTGTGCAAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑AAAAAGGTTTAACGCGTGCGCAGATTGCGCT‑GAACCCAGCAGGTCGACTTGCATa < 2:56738/250‑1 (MQ=255) aCGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGGAAA‑GG‑TGTGGCACCCCTCC‑ATTG‑TCA‑TTCCGGGGACAAG‑AGGGGAATTGTGGGG‑GAAAAGGTGGAACGCGTGCGCAGATTGTGCT‑GTACCCAGAGGGTCGagtttcaaat > 2:374608/1‑242 (MQ=255) gCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGGAAA‑GG‑G‑TTGCACCACACT‑ATTTGTCA‑TTCCCGGCGCGAG‑AGGGGGAAGTTGGGGGAACAAGGGGGAA‑GCGTGCGCGAATTGCGCT‑GAACCCAGCAGGGCGGCTTGCATAGtt > 1:13900/1‑251 (MQ=255) gAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑AAAAAGGTGTAACGCGTGCGCAGATTGCGCT‑GAACCCAGCAGGTCGACTTGCATAGTTTGCTCCt < 2:434895/249‑1 (MQ=255) gTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑AAAAAGGTGTAACGCGTGCGCAGATTGCGCT‑GAACCCAGCAGGTCGACTTGCATAGTTTGCTCCTGCCATAACGTgaagaa < 1:422084/251‑1 (MQ=255) gTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGACAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑G‑TTTCACCACATC‑ATTGGTCA‑TGCAGGGCACAAG‑AGGGGGATGGTGGGG‑GAAAAAGTGGAAAGCGTGCGCCGGTTGCGCC‑GAACCCCGCCGGGCGGCTTGCATTGTTTTCTCCTTCCATaaacggaaga > 1:487274/1‑242 (MQ=255) cAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑G‑TTGCACCACATC‑ATTGGTCA‑TGCCGGGCACAAG‑AGGGGAATTTTGGGG‑AAAAAAGTGGAAAGCGTGCGCAGATTGCGCT‑GAACCCAGCCGGTCGGCTTGCCAAGGTTGCTCCTTCCCTAACGGGAAAAAGc > 1:68963/1‑251 (MQ=255) cAGTGTGCCAACGTAAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑AAAAAGGTGTAACGCGTGCGCAGATTGCGCT‑GAACCCAGCAGGTCGACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGc < 2:363300/251‑1 (MQ=255) aGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACCGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑G‑TTGCACCACATC‑ATTGGGCA‑CGCCGAGCACCAC‑GGGGGGATGTTGGGG‑GAAAAGGTGTTAAGCGGGCGCAGATTGCGCTTGAACC‑ACCAGGGCGGCTTGCATAGGTTGCTCCTTCCACAACggggcgaagg > 1:278271/1‑241 (MQ=255) tgCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑G‑TTGCACCACATC‑CTTGGTGA‑TGCCGTGCACAAG‑AGGGGAATGGTGGTG‑GAAAAGGTGTAACGCGGGCGCAGATTGCGCT‑GAACCCCGCAGGGCGACCTTCATAGTTTGCTCCTGCCATAAAGTGAAGAAGCAATg > 1:295206/1‑250 (MQ=255) tAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑G‑TTGGAACACATC‑CTTGGTCA‑TTCAGTGCACAAG‑AGGGGGAAGTTGGTG‑AAAAAAGTGTAACGCGTGCGCCGAATGGGCT‑GAACCCAGCAGGGCCGCTTGCATAGTTTGCTCCTGCCATAActggcagaaggcacgacccggtggg > 1:94714/1‑227 (MQ=255) aaTCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACCTC‑ATTGGTCA‑TGCAGGGCCCAAG‑AGGGGGATGTTGGGG‑AAAAAGGGGTAACGCGGGCGCAGAtt > 1:402379/1‑179 (MQ=255) aaTCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑AAAAAGGTGTAACGCGTGCGCAGAtt < 2:402379/179‑1 (MQ=255) aacaaGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGGAAA‑GG‑G‑TTGCGCCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAAAGTTGGTG‑GAAAAGGGGTAAAGCGTGCGCAGATTGCGCT‑GGAACCAGCAGGGCGACTTGCATAGTTTGCTCCCGCCCTAAAGTGGAGAAGCCATGACCTGGTGGGCCGTg > 1:29618/1‑251 (MQ=255) caaGGCCCTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑AAAAAGGTGTAACGCGTGCGCAGATTGCGCG‑GAACCCAGCAGGTCGACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGAc < 2:192385/251‑1 (MQ=255) agggCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑AAAAAGGTGTAACGCGTGCGCAGATTGCGCT‑GAACCCAGCAGGTCGACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACt < 1:196661/249‑1 (MQ=255) aaGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCAACACAAC‑ATTGGTCA‑CGCCGTGCACAAG‑AGGGGGGGGTTGGGG‑AAAAAGGGGTAACGCGTGCGGAAATTGCGGT‑GAACCCAGGAGGGGGACTTGGATAGTTTGCTCCTGCCAGAAAGGGAAGAAGCAATGAACTGGGGGGCCGTggtt > 1:467588/1‑248 (MQ=255) aCTGGCGATAGCCGCAAACTGACCGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑AAAAAGGTGTAACGCGTGCGCAGATTGCGCT‑GAACCCAGCAGGTCGACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCt < 1:428170/251‑1 (MQ=255) ggCGATAGCCGCAAACTGGCTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGTGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATGGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑AAAAAGGTGTAACGCGTGCGCAGATTGCGCT‑GACCCCAGCAGGTCGACTTGCATAGTT‑GCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTAc < 1:29852/249‑1 (MQ=255) ggCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑AAAAAGGTGTAACGCGTGCGCAGATTGCGCT‑GAACCCAGCAGGTCGACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACg < 2:452878/251‑1 (MQ=255) cgagaGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑AAAAAGGTGTAACGCGTGCGCAGATTGCGCT‑GAACCCAGCAGGTCGACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGGCCGTGGCTTCCCTACGCt < 2:415631/247‑1 (MQ=255) cGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑AAAAAGGTGTAACGCGTGCGCAGATTGCGCT‑GAACCCAGCAGGTCGACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCt < 2:194976/251‑1 (MQ=255) gATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑AAAAAGGTGTAACGCGTGCGCAGATTgcgc < 2:31476/165‑1 (MQ=255) gATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑G‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑AAAAAAGTGTAACGCGTGCGCAGATTgcgc > 1:31476/1‑165 (MQ=255) cGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑G‑TTGCACCACATC‑ATTGGGTA‑TGCAGTGCACAAG‑AGGGGGATGTTGGGG‑AAAAAAGGGTAACGCGTGCGCAGATTTGGCC‑GAAACCAGCAGGGCGACTTGCATAGTTTGCTCCCTCCCTAACGTGAAGAAGCAATGACCCGGTGGGCCGTGACttaccccccccgggctt > 2:319558/1‑235 (MQ=255) actgactgGCCGTTTCGGTGTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑AAAAAGGTGTAACGCGTGCGCAGATTGCGCT‑GAACCCAGCAGGTCGACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAg < 2:192588/251‑1 (MQ=255) ctgactgGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑TGTTG‑ACCACCTC‑ATTTGGCA‑TGCAGGGCACAAG‑AGGGGGGTGTTGGGG‑AAAAAGGGGTAACGCGTGCGCAGATTTCGCT‑GAACCCACCAGGTCGGCTTGCCTAGTTTTCTCCTGCCATAAAGTGCAGAAGGAATGACCAGGTGGGCCGTGACTTCCCCACGCTGGCATTAttccg > 2:445528/1‑246 (MQ=255) tgGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑G‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGGATGTTGGGG‑AAAAAGGTGTAACGCGGGCGCAGATTGCGCT‑GAACCCAGCAGGTCGGCTTTCATAGGTTGCTCCTGCCCTAACGTGGAGAAGGAATGACCTGGGGGGCCGTGACTTCCCCACGCCGGCATTATCCAGATCAgg > 1:130565/1‑251 (MQ=255) ggCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑AAAAAGGTGTAACGCGTGCGCAGATTGCGCT‑GAACCCAGCAGGTCGACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAg < 2:411806/249‑1 (MQ=255) tCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑AAAAAGGTGTAACGCGTGCGCAGATTGCGCT‑GAACCCAGCAGGTCGACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATAc < 1:243876/249‑1 (MQ=255) tCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑AAAAAGGTGTAACGCGTGCGCAGATTGCGCT‑GAACCCAGCAGGTCGACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACg < 1:480421/250‑1 (MQ=255) gTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCAACCCATC‑ATTGGTGA‑TGCAGTGGACAAG‑GGGGGGATGTTGGTG‑AAAAAAGTGTAACGCGTGCGCAGATTGCGCT‑GAAACCAGCAGGGCGGCTTGCATTGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTTCGCTGGCATTATCCAGATCAGGAGGTACggggt > 1:108111/1‑249 (MQ=255) cGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGAAAA‑GG‑G‑TTGGACCACATC‑CTTGGGCA‑TGCAGGGGACAAG‑AGGGGGATGTTGGGG‑GAAAAGGTGTAACGCGTGCGCCGATTGCGCT‑GAACCCAGCAGGGCGACGTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGGCCGTGGCTTCCCTCCGACGNCATTATCCAGATGAGGTGGTACGGGTAtttt > 2:232850/1‑250 (MQ=255) aTAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑AAAAAGGTGTAACGCGTGCGCAGATTGCGCT‑GAACCCAGCAGGTCGACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTtctc < 2:411825/251‑1 (MQ=255) aCCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAAAGG‑T‑TT‑CCCCACATC‑ATTGGTCA‑TGCAGTGGACCAG‑AGGGGGATGTTGGTG‑AAAAAAGGGTAACGCGGGGGCCGATTGCGCT‑GAACCCAGCAGGTCGACTTGCATAGTTTGCTCCTGCCATAAAGTGAAAAAGCAATGACCTGGGGGTCCGTGAATTTCCTACGCTGGCATTATCCAGATCAGGGGATACGGGGATTTCTCAGc > 1:315234/1‑251 (MQ=255) tGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑G‑TTTCACCCCATC‑ATTTGGCA‑TGCAAGGAACACG‑AGGGGGATGGTGGGG‑GAAAAGGTGTAACGCGGGCGCAGAATTCGGT‑GAACCCCGCCGGGCGGATTGCCTTGTTTGCTCCCTCCATAACCGGAAGAAACAATGACCTGGTGGGCCGTGGCTTCCCTACCCCGGCCTTATCCAGATCAGGGGGTACGGGGTTTTTTCAGCCtttccgc > 1:214766/1‑246 (MQ=255) ggcgcCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑AAAAAGGTGTAACGCGTGCGCAGATTGCGCT‑GAACCCAGCAGGTCGACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCAcccc < 2:425394/250‑1 (MQ=255) gcgcCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGt < 2:49966/75‑1 (MQ=255) ccAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑AAAAAGGTGTAACGCGTGCGCAGATTGCGCT‑GAACCCAGCAGGTCGACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGt < 1:146654/251‑1 (MQ=255) cAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCa < 1:200954/48‑1 (MQ=255) cAAGGTATTGGCGGTAAA‑GG‑G‑TTGCACCACATC‑ATTGGTCA‑TGCAGGGCACAAA‑GGGGGAATGTTGGGGGAAAAAGG‑GTAACGCGTGCGCAAAATGCGCT‑GAACCCAGCAGGTCGACCTGTATAGTTTTCTCCTGCCCTAACGTGAAAAAGCAATGACCTGGGGGTCCGGGACTTCCCTACGCTGGCATTATCCAGATCAGGGGATACGGGGATTTTTCAGCCTTTACGCAGAAGGGCACCCCGAGTCGtt > 1:461296/1‑251 (MQ=255) ggCGGGAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑AAAAAGGTGTAACGCGTGCGCAGATTGCGCT‑GAACCCAGCAGGTCGACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCTAGTCGTTTGGTTGCg < 2:315234/250‑1 (MQ=255) ggTAAA‑GG‑A‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑AAAAAGGTGTAACGCGTGCGCAGATTGCGCT‑GAACCCAGCAGGTCGACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGCCTTCCCTACGCTGGCATTATCCAGCTCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAACGGCACCCCGCGTCGCTTGGTTGCgatg > 2:265432/1‑250 (MQ=255) | GTTCATGACAAAAATGGCGGCGATAATCGAGCGCACCCACCGCTACTGGATCAAGCGTCCAGGGTGTTTGAGAGCTTTTTGCTTGCTCAACGGCAGCACGCATCGCCTGAGCGCGTGGCTGCGTCAGTGTGCCAACGTTAATCAACAAGGCACTGGCGATAGCCGCAAACTGACTGGCCTCTTCGGTTTCGATAACCATCGCTGGCGATGCACCGAGCGCCAGCAAGGTATTGGCGGTAAA‑GG‑T‑TTGCACCACATC‑ATTGGTCA‑TGCAGTGCACAAG‑AGGGGAATGTTGGTG‑AAAAAGGTGTAACGCGTGCGCAGATTGCGCT‑GAACCCAGCAGGTCGACTTGCATAGTTTGCTCCTGCCATAACGTGAAGAAGCAATGACCTGGTGGTCCGTGACTTCCCTACGCTGGCATTATCCAGATCAGGTGATACGGGTATTTCTCAGCCTTCACGCAGAAGGGCACCCCGAGTCGTTTGGTTGCGATG > NC_000913/2184956‑2185440 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |