Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,601,202 Δ13,582 bp [hyfA]focB [hyfA], hyfB, hyfC, hyfD, hyfE, hyfF, hyfG, hyfH, hyfI, hyfJ, hyfR, focB

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2601202 2614783 13582 54 [0] [0] 54 [hyfA]–focB [hyfA],hyfB,hyfC,hyfD,hyfE,hyfF,hyfG,hyfH,hyfI,hyfJ,hyfR,focB

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 26012010 (0.000)54 (0.830) 47/476 0.1 100% coding (1/618 nt) hyfA hydrogenase 4 component A
?NC_000913 2614784 = 0 (0.000)intergenic (+2/+36) focB/yfgO formate channel FocB/putative transporter YfgO

TGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCTCCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTATGTGTTATCGGGCTATTTATTTACGTCAGGAACCCTGAAAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAGATCACCACCGATAAAATAATCACCAGCGGATGCAGGTTAACCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACAC  >  NC_000913/2614545‑2615032
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                        
tccgtgctggctgcgcttgcggccagcctacctcacttctcgtgatcaagatcacattctcgctttcccctgcgacacgggtgtcgaatccattttttgctgaacgttaatgaccatcatttttgtaccgttcagaatccagttaatacataccttattgaatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaagtagccgacaAAATCAGCCCgg                                                                                                                                                                                                                                               >  2:4401‑M2/240‑251 (MQ=255)
          ctgcgcttgcggccagcagacctcacttctcgtgatcaagatcacattctcgctttcccctgcgacacgggtgtcgaatccattttttgctgaacgttaatgaccatcatttttgtcccgttcagaatccagttaatacataacttattgaatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGtt                                                                                                                                                                                                                                     >  2:417804‑M2/230‑251 (MQ=255)
            gcgcttgcggccagcatacctcacttctcgtgatcaagatcacattctcgctttcccctgcgacacgggtgtcgaatccattttttgctgaacgttaatgaccatcatttttgtaccgttcagaatccagttaatacataacttattgaatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTtc                                                                                                                                                                                                                                    <  1:349583‑M2/23‑1 (MQ=255)
                ttgcggccagcatacctcacttctcgtgatcaagatcacattctcgctttcccctgcgacacgggtgtcgaatccattttttgctgaacgttaatgaccatcatttttgtaccgttcagaatccagttaatacataacttattgaatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCgg                                                                                                                                                                                                                               >  2:84088‑M2/224‑251 (MQ=255)
                 tgcggccagcatacctcacttctcgtgatcaagatcacattctcgctttcccctgcgacacgggtgtcgaatccattttttgctgaacgttaatgaccatcatttttgtaccgttcagaatccagttaatacataacttattgaatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCggg                                                                                                                                                                                                                              >  1:492847‑M2/223‑251 (MQ=255)
                   cggccagcatacctcacttctcgtgatcaagatcacattctcgctttcccctgcgacacgggtgtcgaatccattttttgctgaacgttaatgaccatcatttttgtaccgttcagaatccagttaatacataacttattgaatatattgagttaatcagaatggcatcctttatgcaatatgaaatgaaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCt                                                                                                                                                                                                                            >  1:156477‑M2/221‑251 (MQ=255)
                                        cgtgatcaagatcacattctcgctttcccctgcgacacgggtgtcgaatccattttttgctgaacgttaatgaccatcatttttgtaccgttcagaatccagttaatacataacttattgaatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGcgcg                                                                                                                                                                                                          <  1:457532‑M2/49‑1 (MQ=255)
                                              caagatcacattctcgctttcccctgcgacacgggtgtcgattccattttttgctgaacgttaatgaccatcatttttgtaccgttcagaatccagttaatacataacttattgaatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGccc                                                                                                                                                                                                  <  1:90793‑M2/57‑1 (MQ=255)
                                               aagatcacattctcgctttcccctgcgacacgggtgtcgaatccattttttgctgaacgttaatgaccatcatttttgtaccgttcagaatccagttaatacataacttattgaatatattgagttaatcagaatggcatactttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCAt                                                                                                                                                                                                >  2:146200‑M2/193‑251 (MQ=255)
                                                 gatcacattctcgctttcccctgcgacacgggtgtcgaatccattttttgctgaacgttaatgaccatcatttttgtaccgttcagaatccagttaatacataacttattgaatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCg                                                                                                                                                                                              >  1:304644‑M2/191‑251 (MQ=255)
                                                           tcgctttcccctgcgacacgggtgtcgaatccattttttgctgaacgttaatgaccatcatttttgtaccgttcagaatccagttaatacataacttattgaatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCAt                                                                                                                                                                                    >  1:212394‑M2/181‑251 (MQ=255)
                                                            cgctttcccctgcgacacgggtgtcgaatccattttttgctgaacgttaatgaccatcatttttgtaccgttcagaatccagttaatacataacttattgaatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGc                                                                                                                                                                                      <  1:146200‑M2/69‑1 (MQ=255)
                                                                       gcgacacgggtgtcgaatccattttttgctgaacgttaatgaccatcatttttgtaccgttcagaatccagttaatacataacttattgaatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGc                                                                                                                                                                          <  1:317524‑M2/81‑1 (MQ=255)
                                                                            acgggtgtcgaatccattttttgctgaacgttaatgaccatcatttttgtaccgttcagaatccagttaatacataacttattgaatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATc                                                                                                                                                                   >  1:153806‑M2/164‑251 (MQ=255)
                                                                                  gtcgaatccattttttgctgaacgttaatgaccatcatttttgtaccgttcagaatccagttaatacataacttattgaatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTc                                                                                                                                                             >  2:183618‑M2/158‑251 (MQ=255)
                                                                                               tttgctgaacgttaatgaccatcatttttgtaccgttcagaatccagttaatacataacttattgaatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATgg                                                                                                                                                >  1:280762‑M2/145‑251 (MQ=255)
                                                                                                  gctgaacgttaatgaccatcatttttgtacagttcagaatccagttaatacataacttattgaatagattgagttaatcagaatggcatcctttatgcaatattaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCg                                                                                                                                              <  2:471911‑M2/109‑1 (MQ=255)
                                                                                                       acgttaatgaccatcatttttgtagcgttcagaatccagttaatacataacttattgaatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcataacagtttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCTCGGTTTGCCCATCGGGCCAGGCATGAATCACGGCTTGGATCAGCGTCGCCATCGGAATGGCGAAGAAt                                                                                                                                        <  1:162459‑M2/115‑1 (MQ=255)
                                                                                                                 ccatcatttttgtaccgttcagaatccagttaatacataacttattgaatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTNGCCAACGGAATGGCGAAGAATACGcccc                                                                                                                                 >  2:219042‑M2/127‑248 (MQ=255)
                                                                                                                     catttttgtaccgttcagaatccagttaatacataacttattgaatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATc                                                                                                                           <  1:473233‑M2/128‑1 (MQ=255)
                                                                                                                      atttttgtaccgttcagaatccagttaatacataacttattgaatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATccc                                                                                                                         <  1:165591‑M2/130‑1 (MQ=255)
                                                                                                                            gtaccgttcagaatccagttaatacataacttattgaatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACaa                                                                                                                    <  2:492847‑M2/135‑1 (MQ=255)
                                                                                                                                   tcagaatccagttaatacataacttattgaatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAAAATCCCCACAACCCACCg                                                                                                             >  2:345185‑M2/109‑250 (MQ=255)
                                                                                                                                        atccagttaatacataacttattgaatatattgagttaatcagaatggcatcctttaggcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGGTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCGCTCAAACCACCGAAGATc                                                                                                       <  2:414885‑M2/148‑1 (MQ=255)
                                                                                                                                           cagttaatacataacttattgaatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAGATcacc                                                                                                    <  1:27795‑M2/151‑1 (MQ=255)
                                                                                                                                                aatacataacttattgaatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAGATCACCACCg                                                                                                <  1:84088‑M2/155‑1 (MQ=255)
                                                                                                                                                 atacataacttattgaatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAGATCACCACCGAt                                                                                              >  2:134947‑M2/95‑251 (MQ=255)
                                                                                                                                                        acttattgaatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAGATCACCACCGATAAaataa                                                                                       <  1:179651‑M2/164‑1 (MQ=255)
                                                                                                                                                         cttattgaatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAGATCACCACCGATAAaataat                                                                                      >  1:263394‑M2/87‑251 (MQ=255)
                                                                                                                                                               gaatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAGATCACCACCg                                                                                                >  1:135528‑M2/81‑235 (MQ=255)
                                                                                                                                                               gaatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAGATCACCACCg                                                                                                <  2:135528‑M2/155‑1 (MQ=255)
                                                                                                                                                                aatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAGATc                                                                                                       >  1:186792‑M2/80‑227 (MQ=255)
                                                                                                                                                                aatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAGATc                                                                                                       <  2:186792‑M2/148‑1 (MQ=255)
                                                                                                                                                                aatatattgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAGATCACCACCGCTAAAATAATCACCAGc                                                                               >  1:411236‑M2/80‑251 (MQ=255)
                                                                                                                                                                     attgagttaatcagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAGATCACCACCGATAAAATAATCACCAGCGGATg                                                                          >  1:208307‑M2/75‑251 (MQ=255)
                                                                                                                                                                              atcagaatggcctcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCAAAACCCACCGAAAATCCCCACCNCTAAAATAATCACCAGCGGATGCaggtcaa                                                                  >  2:239954‑M2/66‑247 (MQ=255)
                                                                                                                                                                                cagaatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAGATCACCACCGATAAAATAATCACCAGCGGATGCAGGTTAACCg                                                               <  2:63153‑M2/188‑1 (MQ=255)
                                                                                                                                                                                   aatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggcgccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAGATCACCACCGATAAAATAATCACCAGCGGATGCAGGTTAACCGCtt                                                            >  1:489369‑M2/61‑251 (MQ=255)
                                                                                                                                                                                   aatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAGATCACCACCGATAAAATAATCACCAGCGGATGCAGGTTAACCGCtt                                                            >  1:135103‑M2/61‑251 (MQ=255)
                                                                                                                                                                                   aatggcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAGATCACCACCGATAAAATAATCACCAGCGGATGCAGGTTAACCGCtt                                                            <  1:46524‑M2/191‑1 (MQ=255)
                                                                                                                                                                                    atggcatcctttaagcaatatgaaatgcaatggttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGGCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCGCCGAAGATCACCACCGATAAAATAATCACCAGCGGATGCAGGTTAACCGCTTc                                                           <  2:212394‑M2/192‑1 (MQ=255)
                                                                                                                                                                                      ggcatcctttaggcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAGAGCACCACCGATAAAATAATCACCAGCGGATGCAGGTTAACCGCTTCg                                                          <  1:154463‑M2/193‑1 (MQ=255)
                                                                                                                                                                                       gcatcctttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAGATCACCACCGATAAAATAATCACCAGCGGATGCAGGTTAACCGCTTcggc                                                        >  1:194356‑M2/57‑250 (MQ=255)
                                                                                                                                                                                       gcatcctttaagcaatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAACCAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGACCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAACTCCCCACCGATAAAATAATCACCAGCGGATGCCGGTTACCCGCTTcggg                                                        >  2:430651‑M2/57‑250 (MQ=255)
                                                                                                                                                                                                   caatatgaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAGATCACCACCGATAAAATAATCACCAGCGGATGCAGGTTAACCGCTTCGGAGAACAACACCgg                                            <  1:434505‑M2/207‑1 (MQ=255)
                                                                                                                                                                                                         gaaatgcaatgtttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAGATCACCACCGATAAAATAATCACCAGCGGATGCAGGTTAACCGCTTCGGAGAACAACACCGGCACTa                                       <  1:78128‑M2/212‑1 (MQ=255)
                                                                                                                                                                                                                     ttcatatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAGATCACCACCGATAAAATAATCACCAGCGGATGCAGGTTAACCGCTTCGGAGCACAACACCGGCACTAACAGGttgcccgc                          >  2:9317‑M2/27‑248 (MQ=255)
                                                                                                                                                                                                                         tatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCCTCGGGCCAGGAATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAGATCACCACCGAGAAAATAATCACCAGCGGATGCAGGTTAACCGCTTCGGAGAACAACACCGGCACTAACAGGtt                                >  2:424516‑M2/23‑241 (MQ=255)
                                                                                                                                                                                                                         tatcattttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAGATCACCACCGATAAAATAATCACCAGCGGATGCAGGTTAACCGCTTCGGAGAACAACCCCGGCACTAACAGGtt                                <  1:424516‑M2/219‑1 (MQ=255)
                                                                                                                                                                                                                         tatcagtttcaaggagccgacaAAATAAGCCCGGCGAAACAGTTCGTCTGGCTGAAGATTATTCTTGCGCGAGTAGCCCAACGGGCCAGGCATGACTCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAGATCACCACCGATAAAATAATCACCAGCGGACGCCGCGTAAACGCTTCGGAGAACAACACCGGCACTAACAGGTGGACGTCCAgc                      >  2:448601‑M2/23‑251 (MQ=255)
                                                                                                                                                                                                                                ttcaaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAGATCACCACCGATAAAATAATCACCAGCGGATGCAGGTTAACCGCTTCGGCGAACAACCCCGGCACTAACAGGTTGCCGTCCAGCGCCTGa                >  2:180703‑M2/16‑250 (MQ=255)
                                                                                                                                                                                                                                  caaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAGATCACCACCGATAAAATAATCACCAGCGGATGCAGGTTAACCGCTTCGgagaacaacaccggcactaacagagatcggaaggcgtcgtgtagg             >  2:342294‑M2/14‑229 (MQ=255)
                                                                                                                                                                                                                                  caaggagccgacaAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAGATCACCACCGATAAAATAATCACCAGCGGATGCAGGTTAACCGCTTCGGAGAACAACACCGGCACTAACAg                                   <  1:342294‑M2/216‑1 (MQ=255)
                                                                                                                                                                                                                                             caAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAGATCACCACCGATAAAATAATCACCAGCGGATGCAGGTTAACCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATacac  >  1:377697‑M2/3‑251 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                        
TGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCTCCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTATGTGTTATCGGGCTATTTATTTACGTCAGGAACCCTGAAAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGGGCCAGGCATGAATCACGGCTTTGATCAGCGTCGCCAACGGAATGGCGAAGAATACGCCCCAGAATCCCCACAAACCACCGAAGATCACCACCGATAAAATAATCACCAGCGGATGCAGGTTAACCGCTTCGGAGAACAACACCGGCACTAACAGGTTGCCGTCCAGCGCCTGAATAATCAGATACAC  >  NC_000913/2614545‑2615032

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: