Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	19,646	Δ863 bp		insB1–[insA1]	insB1, [insA1]

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	19646	20508	863	58 [0]	[0] 60	insB1–[insA1]	insB1,[insA1]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 19645	0 (0.000)	58 (0.890)	53/478	0.1	100%	intergenic (+25/+166)	nhaR/insB1	DNA‑binding transcriptional activator NhaR/IS1 family protein InsB
	?	NC_000913	20509 =	0 (0.000)					noncoding (55/768 nt)	IS1	repeat region

AATCGTGTTGAGGCCAACGCCCATAATGCGGGCTGTTGCCCGGCATCCAACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGTCTCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGC  >  NC_000913/20269‑20757                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                         aagcttttggtgcgatgcacaatgcaatcttcgttgccccaacgctttatgcatatgacttttatgccgataaaactgtcgtagaaattggtcgcgtcgagaatgtgatggaagagtaccatgctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTc                                                                                                                                                                                                                                                >  1:202613‑M2/241‑251 (MQ=255)           tgcgatgcacaatgcaatcttcgttgccccaacgctttatgcatatgacttttatgccgataaaactgtcgtagaaattggtcgcgtcgagaatgtgatggaagagtaccatgctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaagttTGGAGCACCTCAAAAACAcc                                                                                                                                                                                                                                       >  2:143080‑M2/231‑250 (MQ=255)             cgatgcacaatgcaatcttcgttgccccaacgctttatgcatatgacttttatgccgataaaactgtcgtagaaattggtcgcgtcgagaatgtgatggaagagtaccatgctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACcatc                                                                                                                                                                                                                                    <  1:471464‑M2/23‑1 (MQ=255)              gatgcacaatgcaatcttcgttgccccaacgctttatgcatatgacttttatgccgataaaactgtcgtagaaattggtcgcgtcgagaatgtgatggaagagtaccatgctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaanttaaggtTGGAGCACCTCAAAAACACcatc                                                                                                                                                                                                                                    >  2:253917‑M2/228‑250 (MQ=255)                   acaatgcaatcttcgttgccccaacgctttatgcatatgacttttatgccgataaaactgtcgtagaaattggtcgcgtcgagaatgtgatggaagagtaccatgctatttttgctgagcggatgattaagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCCAAACCACCATCATccac                                                                                                                                                                                                                              >  2:76449‑M2/223‑251 (MQ=255)                                 gttgccccaacgctttatgcatatgacttttatgccgataaaactgtcgtagaaattggtcgcgtcgagaatgtgatggaagagtaccatgctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGtt                                                                                                                                                                                                                >  1:491730‑M2/209‑251 (MQ=255)                                   tgccccaacgctttatgcatatgacttttatgccgataaaactgtcgtagaaattggtcgcgtcgagaatgtgatggaagagtaccatgctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACCCTAAATCAGTAAGTTgg                                                                                                                                                                                                              >  2:487246‑M2/207‑251 (MQ=255)                                           cgctttatgcatatgacttttatgccgataanactgtcgtagaaattggtcgcgtcgagaatgtgatggaagagtaccatgctatttgtgctgagcggatgattcagcacccggcggtccagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCATTAAGTTGGCAGCATCa                                                                                                                                                                                                      <  2:238194‑M2/53‑1 (MQ=255)                                                   gcatatgacttttatgccgataaaactgtcgtagaaattggtcgcgtcgagaatgtgatggaagagtaccatgctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCacctacct                                                                                                                                                                                               <  1:143080‑M2/60‑1 (MQ=255)                                                       atgacttttatgccgataaaaacgtcgtagaaattggtcgcgtcgagaatgtgatggaagagtaccatgctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttgtagtccagcggtgcgttaatcggtagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAAt                                                                                                                                                                                           <  1:335554‑M2/64‑1 (MQ=255)                                                              ttatgccgataaaactgtcgtagaaattggtcgcgtcgagaatgtgatggaagagtaccatgctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATc                                                                                                                                                                                    <  2:339895‑M2/71‑1 (MQ=255)                                                              ttatgccgataaaaatgtggtagaaattggtcgcgtcgagaatgtgatggaagagtaccatgctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgaaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAATCACCATCATACACTAAATCAGTAAGTTGGCAGAATCACCTACCTCAATGTGTATc                                                                                                                                                                                    >  2:417470‑M2/180‑250 (MQ=255)                                                                   ccgataaaactgtcgtagaaattggtcgcgtcgagaatgtgatggaagagtaccatgctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAat                                                                                                                                                                               >  1:173281‑M2/175‑250 (MQ=255)                                                                    cgataaaactgtcgtagaaattggtcgcgtcgagaatgtgatggaagagtaccatgctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCNGCATCACCTACCTCAATGTGTATCACAatat                                                                                                                                                                             >  2:227872‑M2/174‑251 (MQ=255)                                                                    cgataaaactgtcgtagaaattggtcgcgtcgagaatgtgatggaagagtaccatgctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAatat                                                                                                                                                                             <  2:202613‑M2/78‑1 (MQ=255)                                                                    cgataaaactgtcgtagaaattggtcgcgtcgagaatgtgatggaagagtaccatgctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAatat                                                                                                                                                                             <  1:440378‑M2/78‑1 (MQ=255)                                                                    cgataaaactgtcgtagaaattggtcgcgtcgagaatgtgatggaagagtaccatgctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGAAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAatat                                                                                                                                                                             <  1:437311‑M2/78‑1 (MQ=255)                                                                         aaactgtcgtagaaattggtcgcgtcgagaatgtgatggaagagtaccatgctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCat                                                                                                                                                                         >  1:350188‑M2/169‑250 (MQ=255)                                                                             tgtcgtagaaattggtcgcgtcgagaatgtgatggaagagtaccatgctatttttgctgagcggatgattcagcacccggcggtacagcgcatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGCAAGTTGGCAGCATCACCTACCTCAATGTGTATCACACTATCCATATTCt                                                                                                                                                                    >  2:101246‑M2/165‑251 (MQ=255)                                                                              gtcgtagaaattggtcgcgtcgagaatgtgatggaagagtaccatgctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCtt                                                                                                                                                                   >  1:191509‑M2/164‑251 (MQ=255)                                                                                 gtagaaattggtcgcgtcgagaatgtgatggaagagtaccatgctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCNCAATGTGTATCACATTATCCATATTCTTtgt                                                                                                                                                                >  2:231997‑M2/161‑251 (MQ=255)                                                                                  tagaaattggtcgcgtcgagaatgtgatggaagagtaccatgctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTtgtg                                                                                                                                                               >  1:90576‑M2/160‑251 (MQ=255)                                                                                               cgtcgagaatgtgatggaagagtaccagtctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttaggccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCGCAATGTTTATCACTATATCCATATTCTTTGTTGGGGAGTCTGgag                                                                                                                                                  <  1:379486‑M2/105‑1 (MQ=255)                                                                                                  cgagaatgtgatggaagagtaccatgctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGAtt                                                                                                                                               <  1:401262‑M2/108‑1 (MQ=255)                                                                                                       atgtgatggaagagtaccatgctatttttgctgagccgatgattcagctcccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaaacggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACTCTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTa                                                                                                                                          <  1:184431‑M2/113‑1 (MQ=255)                                                                                                           gatggaagagtaccatgctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGat                                                                                                                                       <  1:76450‑M2/116‑1 (MQ=255)                                                                                                           gatggaagagtaccatgctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGat                                                                                                                                       >  2:324286‑M2/135‑250 (MQ=255)                                                                                                            atggaagagtaccatgctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGatat                                                                                                                                     <  1:110445‑M2/118‑1 (MQ=255)                                                                                                              ggaagagtaccatgctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTc                                                                                                                                   >  2:485134‑M2/132‑251 (MQ=255)                                                                                                               gaagagtaccatgctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCt                                                                                                                                  >  2:380818‑M2/131‑251 (MQ=255)                                                                                                                      accatgctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCa                                                                                                                            <  1:231997‑M2/127‑1 (MQ=255)                                                                                                                      accatgctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAg                                                                                                                           <  1:210851‑M2/128‑1 (MQ=255)                                                                                                                        catgctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGa                                                                                                                          >  1:426028‑M2/122‑250 (MQ=255)                                                                                                                         atgctatttttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAAt                                                                                                                        <  1:227872‑M2/131‑1 (MQ=255)                                                                                                                                 tttgctgagcggatgattcagcacccggcggtacatcgaatctgcaagacgtattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaatgtTGGAGCACCTCAAAATCACCATCATACACTAAATCAGTAAGTTGGCAGCATCGCCTACCTCAATGTGTATCACAATAGCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAg                                                                                                                 <  2:460983‑M2/138‑1 (MQ=255)                                                                                                                                 tttgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAg                                                                                                                 <  1:89804‑M2/138‑1 (MQ=255)                                                                                                                                   tgctgagcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCg                                                                                                              >  1:359053‑M2/111‑251 (MQ=255)                                                                                                                                        agcggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGt                                                                                                         <  1:485134‑M2/146‑1 (MQ=255)                                                                                                                                           ggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCt                                                                                                      >  1:444542‑M2/103‑251 (MQ=255)                                                                                                                                           ggatgattcagcacccggcggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCt                                                                                                      >  2:119525‑M2/103‑251 (MQ=255)                                                                                                                                               gattcagcacccggcgggacagcgaatctgcaatacggaatattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaacgttaaggtTGGCGCACCTCAAACACACCATCATACACTACATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCCCAATATCCATACTCTTTTTGGGGGTGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTctagg                                                                                                   >  2:456735‑M2/99‑248 (MQ=255)                                                                                                                                                            gcggtacagcgaatctgcaatacggattattctgcgcttgttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTGTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTGCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACg                                                                                     <  2:173281‑M2/166‑1 (MQ=255)                                                                                                                                                             cggtacagcgaatctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGAATCAGCCGATGGTTCTACGATTCTTAAGCCACg                                                                                     >  2:462850‑M2/85‑250 (MQ=255)                                                                                                                                                                         tctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTc                                                                                               <  1:349204‑M2/156‑1 (MQ=255)                                                                                                                                                                         tctgcaatacggattattctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTc                                                                                               >  2:349204‑M2/73‑228 (MQ=255)                                                                                                                                                                                tacggattattctgcgctttttagtccagcggtgcgttactcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAAc                                                                 >  1:163949‑M2/66‑251 (MQ=255)                                                                                                                                                                                        attctgcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATTCACTAAATCAGTAAGTTGGCAGCATCACCTACCGCAATGTGTATCACAATAGCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGtc                                                         <  1:487246‑M2/194‑1 (MQ=255)                                                                                                                                                                                             gcgctttttagtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGTCTCttt                                                    <  2:350188‑M2/199‑1 (MQ=255)                                                                                                                                                                                                      agtccagcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCACAAACACCATCATACACTAAATCAGTAAGTTTGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGTCTCTTTTGACTATCt                                           >  2:197979‑M2/44‑251 (MQ=255)                                                                                                                                                                                                      aggccagcggtgcgttaatcggcagctcccccaaaggtaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATATGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGGTTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGGCTCTTTTGACtattt                                           >  2:81576‑M2/44‑249 (MQ=255)                                                                                                                                                                                                           agcggtgcgttaatcggcagctcccccaaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGTCTCTTTTGCCTATCTGGCa                                       >  1:489511‑M2/39‑250 (MQ=255)                                                                                                                                                                                                                                     caaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGTCTCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCAtcc            >  1:359608‑M2/13‑250 (MQ=255)                                                                                                                                                                                                                                      aaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGTCTCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGc                >  2:120149‑M2/12‑246 (MQ=255)                                                                                                                                                                                                                                      aaagttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGTCTCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGc                <  1:120149‑M2/235‑1 (MQ=255)                                                                                                                                                                                                                                        agttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGTCTCtttt                                                   <  2:343199‑M2/200‑1 (MQ=255)                                                                                                                                                                                                                                        agttaaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGTCTCtttt                                                   >  1:343199‑M2/10‑209 (MQ=255)                                                                                                                                                                                                                                           taaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGt                                                                               >  1:472307‑M2/7‑178 (MQ=255)                                                                                                                                                                                                                                           taaggtTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGt                                                                               <  2:472307‑M2/172‑1 (MQ=255)                                                                                                                                                                                                                                              ggttGGAGGACCTCAAAAACACCACCCACCACTAACTCAGTCAGTTGGCAGCTTCTCCTACCTCAAGGTGTTTCACAATATCCATATTCTTTGTTGGGGAGTCTTTAGATTGATTAGTTATTCTTGTTCAGAATGTATCATCCGATGGTTTTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGTCTCTTTTGACTATCTGGCAACCGGCAGTATGTTCTCTCACGCATCTCAAAagcag   <  2:271431/248‑1 (MQ=255)                                                                                                                                                                                                                                                 tGGAGCACCTAAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGTCTCTTTTGAATATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAagcagc  >  1:114728/1‑249 (MQ=255)                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                         AATCGTGTTGAGGCCAACGCCCATAATGCGGGCTGTTGCCCGGCATCCAACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGTCTCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGC  >  NC_000913/20269‑20757

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑