| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,867,599 | Δ9,908 bp | yidQ–yidB | yidQ, yidR, cbrA, dgoT, dgoD, dgoA, dgoK, dgoR, yidX, yidA, yidB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3867599 | 3877506 | 9908 | 39 [0] | [0] 39 | yidQ–yidB | yidQ,yidR,cbrA,dgoT,dgoD,dgoA,dgoK,dgoR,yidX,yidA,yidB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3867598 | 0 (0.000) | 39 (0.600) | 38/478 | 0.3 | 100% | intergenic (‑176/‑130) | ibpA/yidQ | small heat shock protein IbpA/DUF1375 domain‑containing putative lipoprotein YidQ |
| ? | NC_000913 | 3877507 = | 0 (0.000) | intergenic (‑42/+198) | yidB/gyrB | DUF937 domain‑containing protein YidB/DNA gyrase subunit B | |||||
AAGTGGTTAAACAAACGGTCAAATCCAATAGCAGAACGGTAAAGCGGGGATAAATCAAAGTTACGCATAATCAATAGCTCCTGAAATCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACTCATCAGGCCAACACCCACGATCAACAGATGAATTTATTATGATAAGAAATGTGTTGTTAGCGTTCATGATATGCAGCGGAATGACATTACTCGGAGGATGCTCCAGCGTGATGTCCCATACCGGAGGGAAAGAAGGAACGTATCCCGGC > NC_000913/3867355‑3867838 | aaGTGGTTAAACAAACGGTCAAATCCAATAGCAGAACGGTAAAGCGGGGATAAATCAAAGTTACGCATAATCAATAGCTCCTGAAATCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtaga < 2:323080‑M1/248‑5 (MQ=255) ggTCAAATCCAATAGCAGAACGGTAAAGCGGGGATAAATCAAAGTTACGCATAATCAATAGCTCCTGAAATCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgc > 2:491663‑M1/1‑228 (MQ=255) cAAATCCAATAGCAGAACGGTAAAGCGGGGATAAATCAAAGTTACGCATAATCAATAGCTCCTGAAATCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcgg < 1:491829‑M1/250‑26 (MQ=255) aTCCAATAGCAGAACGGTAAAGCGGGGATAANTCAAAGTTACGCATAATCAATAGCTCCTGAAAGCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattg < 2:217503‑M1/251‑30 (MQ=255) ccAATAGCAGAACGGTAAAGCGGGGATAAATCAAAGTTACGCATAATCAATAGCTCCTGAAATCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgc < 1:215037‑M1/250‑31 (MQ=255) aaTAGCAGAACGGTAAAGCGGGGATAAATCAAAGTTACGCATAATCAATAGCTCCTGCAATCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGAATAGtagctttgcgggatgataattgcggattgc > 2:496112‑M1/1‑218 (MQ=255) aTAGCAGAACGTTAAAGCGGGGATAAATCAAAGTTACGCATAATCAATAGCTCCTGAAATCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATGGtagattggcgggttgataattgcggattgcagaa < 1:127882‑M1/251‑35 (MQ=255) aTAGCAGAACGGTAAAGCGGGGATAAATCAAAGTTACGCATAATCAATAGCTCCTGAAATCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtanatttgcgggatgataattgcggattgccga > 2:246621‑M1/1‑217 (MQ=255) gTAAAGCGGGGATAAATCAAAGTTACGCATAATCAATAGCTCCTGAAATCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaatagggc > 2:121971‑M1/1‑206 (MQ=255) aaaGCGGGGATAAATCAAAGTTACGCATAATCAATAGCTCCGGAAATCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCATCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcg < 2:437316‑M1/250‑47 (MQ=255) aaaGCGGGGATAAATCAAAGGTACGCATCATCAATAGCTCCTGAAATCAGCGAGACTGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGAGCGTACTCATCGGCTACGATGTAACAATGGGTCTGGTAATGAACTTGTCAAGCCTTATCCGCGGAC‑TTTTTTTTTCATATTGTGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaaagaagg > 2:407503‑M1/1‑204 (MQ=255) cAAAGTTACGCATAATCAATAGCTCCTGAAATCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgatgattgcggattgcagaaataaaaagggcggagatgatctccgcc < 1:496361‑M1/250‑62 (MQ=255) tACGCATAATCAATAGCTCCTGAAATCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttct > 1:460264‑M1/1‑183 (MQ=255) cAATAGCTCCTGAAATCAGCGAGAATGTAAGACCTTCCACAATGGACCGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttct > 1:424627‑M1/1‑173 (MQ=255) gACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgacttatccgg > 1:282523‑M1/1‑143 (MQ=255) caATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgccttatccggcctacaaaa < 1:177050‑M1/251‑118 (MQ=255) gACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAACTGGGTCTGGAAATGACCTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggctgataattgcggtttgcagaattaaaaagggcggagatgatctccgcccttttcttatagcttcttgccggctgcggcgtgaaccccttatccggcccacaaactcagt > 2:211903‑M1/1‑129 (MQ=255) caggtcaggtAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaa < 2:209614‑M1/161‑35 (MQ=255) caggtcaggtAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaa > 1:209614‑M1/1‑127 (MQ=255) ccAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcatgaaaattcaatacat > 1:426371‑M1/1‑115 (MQ=255) cccATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcatgaaaattcaatacattgca > 1:111369‑M1/1‑107 (MQ=255) cATCGGTTACGATGTAAAAATTGGTCTGGAAAGGAACTTTTCAAGCCTTATCAGCGTACTTTTTTTTTTCAGATTATGGTCTAGTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgctcttttcttatagctgcttgccggatgcggcgtgaacgccttatccggcctacaaaatcatgaaaattcaatccattgcaagattttcgtaggcctgata < 2:296387‑M1/251‑161 (MQ=255) aTCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtagctttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgccctatccggcctaaaaaatcatgaaaattcaatacattgcaagattttcttcagcctgata > 2:489719‑M1/1‑89 (MQ=255) gggTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcatgaaaattcaatacattgcaagattttcgtaggcctgataagcgtagcgcatcaggcacgct < 1:358788‑M1/251‑183 (MQ=255) gggTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcatgaaaattcaatacattgcaagattttcgtaggcctgataagcgtagcgcaacaggcacgcc > 1:357049‑M1/1‑69 (MQ=255) aaGCCTTATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcatgaaaattcaatacattgcaagattttcgtaggcctgataagcgtagcgcatcaggcacgctcgcatggttagcgccattaaa < 1:491663‑M1/251‑204 (MQ=255) aaGCCTTATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgc > 2:189266‑M1/1‑48 (MQ=255) aaGCCTTATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgc < 1:189266‑M1/136‑89 (MQ=255) aGCCTTATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcatgaaaattcaatacattgcaagattttcgtaggcctgataagcgtagcgcatcaggcacgctcgcctggttagcgccattaaat > 2:213097‑M1/1‑47 (MQ=255) gCCTTATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagctgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcatgaaaattcaatacattgcaagattttcgtaggcctgataagcgtagcgcatcaggcacgctcgcatggttagcgccattaaat > 1:48819‑M1/1‑46 (MQ=255) ttATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgc < 1:58866‑M1/142‑100 (MQ=255) ttATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgc > 2:58866‑M1/1‑43 (MQ=255) tATCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgtgatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcatgaaaattcaatacattgcaagattttcgtaggcctgataagcgtagcgcatcaggcacgctcgcatggttagcgccattaaatatcg < 1:496112‑M1/250‑209 (MQ=255) aTCAGCGGAC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcatgaaaattcaatacattgcaagattttcgtaggcctgataagcgtagcgcatcaggcacgctcgcatggttagcgccattaagtatcgat > 1:364390‑M1/1‑41 (MQ=255) aGCGGCC‑TTTTTTTTTCAGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcatgaaaattccatacattgcaagattttcgtaggcctgataagcgtagcgcatcaggcccgctcgcatggttagcgccattaaatctcgatatt > 2:350238‑M1/1‑38 (MQ=255) aGTTTATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagacataaaaagggcggagatgatatccgcccttttcttatagcttcttgccggatgcggcgtgaaccccttatccggcctacaaaatcatgaacattaaatacattgcaagattttcgtaggcctgatacgagtagcgcatcaggcacgctcgcctggttagcgccattaaatatcgaaattcgccgctttcagggcgt > 1:215316‑M1/1‑21 (MQ=255) ttATGGTCTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcatgaaaattcaatacattgcaagattttcgtaggcctgataagcgtagcgcatcaggcacgctcgcatggttagcgccattaaatatcgatattcgccgctttcagggcgttc < 2:364767‑M1/250‑233 (MQ=255) ggTCTATTGCATAGtagatttgcgggatgataatggcggattgcagaaataaaaaggtcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcatgaaaatgcaatacattgcaagattttcgtaggcctgataagcgtagcgcatcaggcacgctcgcatggttagcgccattaaatatcgatattcgccgctttcagggcgttctctt < 1:248115‑M1/250‑237 (MQ=255) cTATTGCATAGtagatttgcgggatgataattgcggattgcagaaataaaaagggcggagatgatctccgcccttttcttatagcttcttgccggatgcggcgtgaacgccttatccggcctaccaaatcatgaaatttcaatacattgcaagattttcgtaggccgggaaagcgtagcgcatcaggcacacccgcatggttagcgccattaaatatcgatattcgccgctttccgggcagtgtcttaaat > 2:274554‑M1/1‑11 (MQ=255) | AAGTGGTTAAACAAACGGTCAAATCCAATAGCAGAACGGTAAAGCGGGGATAAATCAAAGTTACGCATAATCAATAGCTCCTGAAATCAGCGAGAATGTAAGACCTTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGAC‑TTTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACTCATCAGGCCAACACCCACGATCAACAGATGAATTTATTATGATAAGAAATGTGTTGTTAGCGTTCATGATATGCAGCGGAATGACATTACTCGGAGGATGCTCCAGCGTGATGTCCCATACCGGAGGGAAAGAAGGAACGTATCCCGGC > NC_000913/3867355‑3867838 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |