| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,097,887 | Δ17,605 bp | [ghrA]–mdtG | 20 genes [ghrA], ycdX, ycdY, ycdZ, csgG, csgF, csgE, csgD, csgB, csgA, csgC, ymdA, ymdB, clsC, opgC, opgG, opgH, yceK, msyB, mdtG |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1097887 | 1115491 | 17605 | 68 [0] | [0] 68 | [ghrA]–mdtG | [ghrA],ycdX,ycdY,ycdZ,csgG,csgF,csgE,csgD,csgB,csgA,csgC,ymdA,ymdB,clsC,opgC,opgG,opgH,yceK,msyB,mdtG |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1097886 | 0 (0.000) | 68 (1.050) | 62/474 | 0.0 | 100% | coding (1/939 nt) | ghrA | glyoxylate/hydroxypyruvate reductase A |
| ? | NC_000913 | 1115492 = | 0 (0.000) | intergenic (‑2/+170) | mdtG/lpxL | efflux pump MdtG/lauroyl acyltransferase | |||||
TCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTATGGATATCATCTTTTATCACCCAACGTTCGATACCCAATGGTGGATTGAGGCACTGCGCAAAGCTATTCCTCAGGCAAGAGTCAGAGCATGGAAAAGCGGAGATAATGACTCTGCTGATTATGCTTTAGTCTGGCATCCTCCTGTTGAAATGCTGGCAGGGCGCGATCTTAAAGCGGTGTTCGCACTCGGGGCCGGTGTTGATTCTATTTTGAGCAAGCTACAGGCACACCCTGAAA > NC_000913/1097648‑1098123 | tCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgt > 1:451109‑M1/1‑239 (MQ=255) ccAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcactccgctgttgg > 2:13693‑M1/1‑236 (MQ=255) cTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcgg < 1:43970‑M1/247‑30 (MQ=255) cTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcgg > 2:43970‑M1/1‑218 (MQ=255) tGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaac < 1:99372‑M1/250‑35 (MQ=255) tGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaac < 1:190550‑M1/250‑35 (MQ=255) tGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAAGGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGTTGGTGGCCTTTGTAGCGCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTGTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaac < 2:429716‑M1/250‑35 (MQ=255) tGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacata > 1:479399‑M1/1‑213 (MQ=255) aTTTAGGGAAATCATGCCCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggttcgccaggcgcggtgaacataagaagaaaagataag < 1:376968‑M1/251‑53 (MQ=255) ttAGGGAAATCATGACCTGAGGTCAACAAANTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagc < 2:229149‑M1/250‑54 (MQ=255) cATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCACTGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATACCGATAAGTGCGAATACATTTCGCACAACGCTTTTCGGGAGCCAGTAgcaatccgctgttggttcgccaggcgcggtgancataagaagaaaagataagcacactgattat > 2:227876‑M1/1‑187 (MQ=255) gACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGGTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaatgatgcg < 2:168601‑M1/251‑68 (MQ=255) cTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgccc > 1:116355‑M1/1‑181 (MQ=255) gAGGTCAACAAACTTTTTAAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactcattatgcgcccg > 2:415197‑M1/1‑179 (MQ=255) tttttGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcg > 1:22148‑M1/1‑166 (MQ=255) gAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatc > 2:185195‑M1/1‑161 (MQ=255) tATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcg > 2:323986‑M1/1‑145 (MQ=255) tCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgct < 1:141343‑M1/250‑109 (MQ=255) tCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgct < 1:55194‑M1/250‑109 (MQ=255) aaCTTCAATCAATGTGTGGTTTTAATAAGCGNAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaat < 2:254001‑M1/251‑113 (MQ=255) attcAATCAATGTGTGGTTTTAATAAGCGCAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGCCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacatcagaagaacagataatcacactaattatgcgcccgacttccagggggcgcaatccagcgcgcttttatcgctacatc > 2:444270‑M1/2‑137 (MQ=255) tcaatcaaTGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatca < 2:479399‑M1/249‑115 (MQ=255) caatcaatGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatcaggg > 1:114098‑M1/1‑134 (MQ=255) aatcaatGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatcagggg < 1:49498‑M1/251‑119 (MQ=255) atcaatGTTTGGTTTTAATAAGCGAAATCTGCTTTGTTTGCCACCGACCACGGATTTGTTATGCTGGGTGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccaggggtcgcaatccagagagcttttatcgctaaatcaggggg < 2:395698‑M1/251‑120 (MQ=255) caatGTGTGGTGTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgcggttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatcaggggga < 1:79576‑M1/250‑121 (MQ=255) aatttttggttgtaATAAGCGAAATCGTCTTTTTTTGCCACCGACCACGGTTTTGTTATGCTTGTGGCCTTTGTAGAGCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTGCGGGATTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaatgatgcgcccgacttccaggggtcgcaatccagagagattttatcgctaaatcagggtgatt < 2:297564‑M1/245‑123 (MQ=255) atGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatcagggggattt < 2:487872‑M1/251‑124 (MQ=255) gtgtgGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatcagggggatttgc < 1:104393‑M1/251‑126 (MQ=255) gtgtgGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacata > 2:189826‑M1/1‑126 (MQ=255) gtgtgGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacata < 1:189826‑M1/163‑38 (MQ=255) ttttAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCATTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgagccaggcgcggtgaacataagaagaaaagataagcaaactaattatgcgcccgacttcaagggggcgcaatccagagagcttttatcgctaaataagggggatttgctgtggt > 2:174842‑M1/1‑120 (MQ=255) taataaGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatcagggggatttgctgtggtaat > 2:360822‑M1/1‑117 (MQ=255) ataaGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatcagggggatttgctgtggtaatgc > 1:431793‑M1/1‑115 (MQ=255) aGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatcagggggatttgctgtggtaatgccgg > 1:313788‑M1/1‑112 (MQ=255) aGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatcagggggatttgctgtggtaatgccgg > 2:465123‑M1/1‑112 (MQ=255) gCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatcagggggatttgctgtggta > 2:33105‑M1/1‑111 (MQ=255) gCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatcagggggatttgctgtggta < 1:33105‑M1/243‑133 (MQ=255) aTCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatcagggggatttgctgtggtaatgccggatgcc > 1:359253‑M1/1‑106 (MQ=255) gCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatcagggggatttgctgtggtaatgccggatgccattct > 1:109682‑M1/1‑102 (MQ=255) tttttGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcagtccgctgttggt < 2:22254‑M1/114‑17 (MQ=255) tttttGCCACCGACCACGGATTTGTTATGCTGGTAGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCAAAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggt > 1:22254‑M1/1‑98 (MQ=255) ttttGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatcagggggatttgctgtggtaatgccggatgccattgtgaag < 2:263926‑M1/250‑154 (MQ=255) ttGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgc < 1:454372‑M1/202‑108 (MQ=255) ttGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgc > 2:454372‑M1/1‑95 (MQ=255) ccACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatcagggggatttgctgtggtaatgccggatgccattctgaagcatccggcatggg < 1:13693‑M1/251‑167 (MQ=255) cACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgccttccagggggcgccatccagagagcttttatcgctaaatcagggggatttgctgtggtaatgccggatgccattctgaagcatccggcatggga < 1:462066‑M1/251‑168 (MQ=255) cGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatcagggggatttgctgtggtaatgccggatgccattctgaagcatccggcatgggaga < 2:8138‑M1/251‑170 (MQ=255) cGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatcagggggatttgctgtggtaatgccggatgccattctgaagcatccggcatggg > 2:317108‑M1/1‑82 (MQ=255) gatgtgttaGGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGATTTTCGGGAGTCAGTAgcaatccgctgtttgtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgccttcaagggggcgcaatccagagagcttatatcgctaaatcagggggctttgtggtggtaatgccggatgccattctgaatcatccggcatggaagagt > 2:262371‑M1/5‑80 (MQ=255) gATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccaga < 1:285112‑M1/174‑95 (MQ=255) gATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggggaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccaga > 2:285112‑M1/1‑80 (MQ=255) tttGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatcagggggatttgctgtggtaatgccggatgccattctgaagcatccggcatgggagattt > 2:161165‑M1/1‑78 (MQ=255) ttGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatcagggggatttgctgtggtaatgccggatgccattctgaagcatccggcatgggagattta < 2:431793‑M1/250‑174 (MQ=255) gATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatcagggggatttgctgtggtaatgccggatgccattctgaagcatccggcatgggagatttaatagcgtgaaggaacgccttccgg > 1:454482‑M1/1‑54 (MQ=255) atcataaaggttagtgcgaataaatGTCGCACAACGCTTTTTGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagatatgcacactaattatgcgcccgacttccagggggctcaatccagagagcttttatcgcgaaatcagggggatttgctgtggtaatgccggatgccattctgaagcatccggcatgggagatttaatagcgtgaaggaacgccttccggg < 2:383609‑M1/239‑199 (MQ=255) cATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatcagggggatttgctgtggtaatgccggatgccattctgaagcatccggcatgggagatttaatagcgtgaaggaacgccttccgggcg > 1:233559‑M1/1‑51 (MQ=255) aaCGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatcagggggatttgctgtggtaatgccggatgccattctgaagcatccggcatgggagatttaatagcgtgaaggaacgccttccgggcgtgt > 1:402557‑M1/1‑48 (MQ=255) aTAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatcagggggatttgctgtggtaatgccggatgccagtctgaagcatccggcatgggagatttaatagcgtgaaggaacgccttccgggcgtgtttta < 2:128425‑M1/251‑208 (MQ=255) aTAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatcagggggatttgctgtagtaatgccggatgccattctgaagcatccggcatgggagatttaatagcgtgaaggaacgccttccgggcgcgtttt > 2:341415‑M1/1‑44 (MQ=255) aGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatcagggggatttgctgtggtaatgccggatgccattctgaagcatccggcatgggagatttaatagcgtgaaggaacgccttccgggcgtgttttaa > 1:24242‑M1/1‑41 (MQ=255) aaTAAATTTCGCACAACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatcagggggatttgctgtggtaatgccggatgccattctgaagcatccggcatgggagatttaatagcgtgaaggaacgccttccgggcgtgttttaaagcgacgg > 1:388164‑M1/1‑35 (MQ=255) ttCGCACAACGCTTTTCTGGAGTCAGTAgcaatccgctgttggtgcgccaggctcggcgaacataagacgaaaagatcagcacactaattatgcgcccgacttccagggggcgcaatccagagtgcttttatcgataaatcagggggatttgatgtggtaatgccggatgccattctgacgcatccggcatgggggctttcttagcgtgaaggaacgccttccaggcgtgttttagagcgacggtgtaacc > 2:478921‑M1/1‑28 (MQ=255) cacaACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatcagggggatttgctgtggtaatgccggatgccattctgaagcatccggcatgggagatttaatagcgtgaagtaacgccttccgggcgtgttttaaagcgacggtgtaaccacat < 2:455644‑M1/251‑228 (MQ=255) caACGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatcagggggatttgctgtggtaatgccggatgccattctgaagcatccggcatgggagatttaatagcgtgaaggaacgccttccgggcgtgttttaaagcgacggtgtaaccacatat < 1:28529‑M1/251‑230 (MQ=255) aCGCTTTTCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgtacataagaagaaaagataagcacactaattatgcgcccgacatccagggggcgcaatccagagagcttttatcgctaaatcaggggggtttgctgtggtaatgccggatgccattctgcagcatccggcatgggagat > 1:447470‑M1/1‑20 (MQ=255) aCGCTTTTAGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaaacagggggatttgctgtggtaatgccggatgccattctgaagcatccggcatgggagat < 2:447470‑M1/190‑171 (MQ=255) tCGGGAGTCAGTAgcaatccgctgttggtgcgccaggcgcggtgaacataagaagaaaagataagcacactaattatgcgcccgacttccagggggcgcaatccagagagcttttatcgctaaatcagggggatttgctgtggtaatgccggatgccattctgaagcatccggcatgggagatttaatagcgtgaaggaacgccttccgggcgtgttttaaagcgacggtgtaaccacatatactgctct < 1:161165‑M1/250‑238 (MQ=255) | TCACCAAATTGTCGTTCCTGTCTTGCTGGAACGGGCGCTAATTTAGGGAAATCATGACCTGAGGTCAACAAACTTTTTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCGCACAACGCTTTTCGGGAGTCAGTATGGATATCATCTTTTATCACCCAACGTTCGATACCCAATGGTGGATTGAGGCACTGCGCAAAGCTATTCCTCAGGCAAGAGTCAGAGCATGGAAAAGCGGAGATAATGACTCTGCTGATTATGCTTTAGTCTGGCATCCTCCTGTTGAAATGCTGGCAGGGCGCGATCTTAAAGCGGTGTTCGCACTCGGGGCCGGTGTTGATTCTATTTTGAGCAAGCTACAGGCACACCCTGAAA > NC_000913/1097648‑1098123 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |