Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 641,446 Δ17,325 bp [uspG]crcB 18 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 641446 658770 17325 41 [0] [0] 41 [uspG]–crcB [uspG],ybdR,yldA,rnk,rna,citT,citG,citX,citF,citE,citD,citC,dpiB,dpiA,dcuC,pagP,cspE,crcB

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 6414450 (0.000)41 (0.630) 38/478 0.3 100% coding (423/429 nt) uspG universal stress protein G
?NC_000913 658771 = 0 (0.000)intergenic (‑833/‑176) crcB/tatE F(‑) channel protein/twin arginine protein translocation system ‑ TatE protein

GCGTGTTCGCAGCGGGTGACTGTACGACGGTTCCGTACAAGCAGATCATCATCGCCACTGGCGAAGGTGCCAAAGCCTCTCTGAGTGCTTTTGACTACCTGATTCGCACCAAAACTGCATAAGAAGAAGTAAGATTCACCTGCAATTGCTTAGCCGCCGGGGTCAAACCTGGCGGCTTTTTTATGGCATTAAAAAGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCACAACCAGCACCGGCAGATTGGCGTGGCGGATCACGCTCGAGGCGTTAGAACCTAACAGATGGGTCGAAATCGATGGGTTGCGAGAACCAATAACTACAACATCAGCCCCCAGTTCTTCTGCCAACTCATTGACTTCATCCCGCACGCTACCAAAACGGACATGTTGTTTAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAA  >  NC_000913/641197‑641695
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                          
gCGTGTTCGCAGCGGGTGACTGTACGACGGTTCCGTACAAGCAGATCATCATCGCCACTGGCGAAGGAGCCAAAGCCTATCAGAGTGCTTTTGACTACCTGATTCGCACCAAAACTGCATAAGAAGAAGTAAGATTCACCTGCAATTGCTTAGCCGCCGGGGTCAAACCTGGCGGCTTTTTTATGGCATTAAAAAGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGCTACTTATTCTGCCACTTAACGCct                                                                                                                                                                                                                                                          >  2:403597‑M1/1‑249 (MQ=255)
    gtccgcggcgggtgaCTGTCCGACGGTCCCGNACAAGCAGACCATCAGCGCCACTGGCGAAGGTGCCAAAGCCTCTCTGAGTGCTTTTGACTACCTGATTCGCACAAAAACTGCATAAGAAGAAGTAAGATTCACCTGCAATTGCTTAGCCGCCGGGGTCAACCCTGGCGGCTTTTTTATGGCATTAAAAAGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCctgccc                                                                                                                                                                                                                                                      <  2:241809‑M1/244‑7 (MQ=255)
     ttCGCAGCGGGTGACTGTACGACGGTTCCGTACAAGCAGATCATCATCGCCACTGGCGAAGGTGCCAAAGCCTCTCTGAGTGCTTTTGACTACCTGATTCGCACCAAAACTGCATAAGAAGAAGTAAGATTCACCTGCAATTGCTTAGCCGCCGGGGTCAAACCTGGCGGCTTTTTTATGGCATTAAAAAGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCctgccc                                                                                                                                                                                                                                                      <  1:460976‑M1/250‑7 (MQ=255)
      tCGCAGGGGGGGACTGTTCTACGGTCCCGTAAAAGAAAATCATCCCCGCCACTGGCGAAGGTGCCAAAGCCTCTCTGAGTGTTTTTGCCTACCTGATTCGCACCAAAACTGCATAAGAAGAAGAAAGATTCACCTGCAATTGCTTAGCCGCCGGGGTCAAACCTGGCGGCTTTTTTATGGCATTAAAAAGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCctgcccg                                                                                                                                                                                                                                                     <  2:308351‑M1/250‑8 (MQ=255)
       cGCAGCGGGTGACTGTACGACGGTTCCGTACAAGCAGATCATCATCGCCACTGGCGAAGGTGCCAAAGCCTCTCTGAGTGCTTTTGACTACCTGATTCGCACCAAAACTGCATAAGAAGAAGTAAGATTCCCCTGCAATTGCTTAGCCGCCGGGGTCAAACCTGGCGGCTTTTTTATGGCATTAAAAAGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCctgcccgtc                                                                                                                                                                                                                                                   <  1:218807‑M1/251‑10 (MQ=255)
        gCAGCGGGTGTCTGTAGAACGGTCCCGTACAGGCAGATCATCATCCCCACTGGCGAAGGTGCCAAAGCCTTTCTGATTGCTTTTGATTACCTGATTCGCACCAAACCTGCATATGAAGAAGTAAGATTCACCTGCAATTGGTTAGCCGCCGGGGTCAACCCTGGCTGCTTTTTTATGCAATTAAAAAGCCCCGCCGTGATGGCTCCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCctgcccgtct                                                                                                                                                                                                                                                  <  1:468205‑M1/251‑11 (MQ=255)
         cAGCGTGTGATTGTACGCCGTTCCCGTACACGCAGATCATCATCGCCACTGGGGAAGGTTCCAAAGCCTCTCTGAGTGTTTTTGACTCCCTGATTCTCACCAAAACTGCAGAAGAAGAAGTAAGATTCCCCTGCAATTGCTTAGCCGCCGGGGTAAAACCTGGCGGCTTTTTTATGGCATTAAAAAGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCctgcccgtctt                                                                                                                                                                                                                                                 <  1:314581‑M1/251‑12 (MQ=255)
                                 cGTACAAGCAGATTATCATCGCCACTGGCGAAGGTGCCAATGCCTCTCTGAGTGCTTTTGATTACCTGATTCGCACCAAAACTGCATAAGAAGAAGTAAGATTCACCTGCAATTGCTTGGCCGCCGGGGTCAATCATGGCGGCTTTTTTTTGGCATTAAAAAGCCCCGCCGGGATGGCTTCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCctgcccgtcttaaacaaccgtcgctttgcgccgcc                                                                                                                                                                                                                         <  1:403597‑M1/251‑36 (MQ=255)
                                         cAGATCATCATCGCCACTGGCGAAGGTGCCAAAGCCTCTCTGAGTGCTTTTGACTACCTGATTCGCACCAAAACTGCATAAGAAGAAGTAAGATTCACCTGCAATTGCTTAGCCGCCGGGGTCAAACCTGGCGGCTTTTTTAGGGCATTAAAAAGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCctgcccgtcttaaacaaccgtcgctttgcgccgccgcaattat                                                                                                                                                                                                                 <  1:338079‑M1/251‑44 (MQ=255)
                                              catcttcGCCACTGGCGAAGGTGCTAAGCCNTCTCTGAGTGCTTTGGACGCCCTGATCCGCACCAAAACTGCATAAGAAGAAGTAAGATTCACCTGCAATTGTTTAGCCGCCGGGTTCAACCCTGGCGGCTTTTTTATGGCATTAAAAAGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCctgcccgtcttaaacaaccgtcgctttgctccgcctcaattattatg                                                                                                                                                                                                             <  2:244885‑M1/250‑48 (MQ=255)
                                                      ccACTGGCGAAGATGCCAAAGCCTCTCTGAGTGCTTTTGACTACCTGATTCGCACCAAAACTGCATAAGAAGAAGTAAGATTCACCTGCAATTGCTTAGCCGCCGGGGTCAAACCTAGCGGCTTTTTTATGGCATTAAAAAGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGATACTTCTTCTGGCAATTAACGCctgcccgtcttaaacaaccgtcgctttgcgccgccgcaattattatgatgtttttt                                                                                                                                                                                                    >  2:184963‑M1/1‑195 (MQ=255)
                                                      ccACGGGCGAATGTGCCAAAGCTTCTATGAGGGCTTTTGACTACCTGATTCGCACCAAAACGGCATAAGAAGAAGAAAGATTCCCCTGCAATGGCTTAGCCGCCGGGGTCAACCCGGGCGCCTTTTTTAGGGCATTAAAAAGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCctgcccgtcttaaacaaccgtcgctttgcgccgccgcaattattatgatgtttttt                                                                                                                                                                                                    <  2:382760‑M1/251‑57 (MQ=255)
                                                                    gCCAAAGCCTCTCTGAGTGCTTTTGACTACCTGATTCGCACCAAAACTGCATAAGAAGAAGTAAGATTCACCTGCAATTGCTTAGCCGCCGGGGTCAAACCTGGCGGCTTTTTTATGGCATTAAAAAGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCctgcccgtcttaaacaaccgtcgctttgcgccgccgcaattattatgatgtttttttactcggcgcttg                                                                                                                                                                                       >  1:177179‑M1/1‑181 (MQ=255)
                                                                        aaGCCTCTATGAGTCCTTTTGACTACTTGATTCGCCCCAAACCTGCATAAGAAGAATTAAGATTCACCGGCAATTGCTTAGCCGCCGGGGTCAACCCTGGCGGCTTTTTTAGGGCATTAAAAAGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCctgcccgtcttaaacaaccgtcgctttgcgccgccgcaattattatgatgtttttttactcggcgcttgattca                                                                                                                                                                                  <  1:330372‑M1/251‑75 (MQ=255)
                                                                         aGCCTCTCTGAGTGCTTTTGACTACCTGATTCGCACCAAAACTGCATAAGAAGAAGTAAGATTCACCTGCAATTGCTTAGCCGCCGGGGTCAAACCTGGCGGCTTTTTTATGGCATTAAAAAGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCctgcccgtcttaaacaaccgtcgctttgcgccgccgcaattattatgatgtttttttactcggcgcttgattcac                                                                                                                                                                                 >  1:15993‑M1/1‑176 (MQ=255)
                                                                                   aGTGCTTTTGACTACCTGCTTCGCACCAAAACTGCATAAGAAGAAGTAAGATTCACCTGCAATTGCTTAGCCGCCGGGGTCAAACCTGGCGGCTTTTTTATGGCATTAAAAAGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCctgcccgtcttaaacaaccgtcgctttgcgccgccgcaattattatgatgtttttttactcggcgcttgattcaccttgttac                                                                                                                                                                         >  2:423885‑M1/1‑166 (MQ=255)
                                                                                                ccctGATTCGCACCAAAACTGCATAGGAAGAAGTAAGATTCTCCTTCAATTGCTTAGCCGCCGGGGTCAATCCTGGCGGTTTTTTTATGGCATTAAAACGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCctgcccgtcttaaacaaccgtcgctttgcgccgccgcaattattatgatgtttttttactcggcgcttgattcaccttgttacagattgctattgtgt                                                                                                                                                          <  2:31378‑M1/250‑99 (MQ=255)
                                                                                                 ccTGATTCGCACCAAAACTGCATAAGAAGAAGTAAGATTCACCTGCAATTGCTTAGCCGCCGGGGTCAAACCTGGCGGCTTTTTTATGGCATTAAAAAGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCctgcccgtcttaaacaaccgtcgctttgcgccgccgcaattattatgatgtttttttactcggcgcttgattcaccttgttacagattgctattgtgtg                                                                                                                                                         <  1:11456‑M1/251‑100 (MQ=255)
                                                                                                    gATTCGCACAAAAACGGCATAAGAAGAAGTAAGATTCCCCTGCAATTGCTTAGCCGCCGGGGTCAAACCTGGCGGCTTTTTTATGGCATTAAAAAGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCctgcccgtcttaaacaaccgtcgctttgcgccgccgcaattattatgatgtttttttactcggcgcttgattcaccttgttacagattgctattgtgtgcg                                                                                                                                                       <  1:225430‑M1/250‑102 (MQ=255)
                                                                                                     aTTCGCACCAAAACTGCATAAGAAGACGTAAGATTCACCTGCAATTGCTTAGCCGCCGGGGTCAAACCTGGCGGCTTTTTTATGGCATTAAAAAGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCctgcccgtcttaaacaaccgtcgctttgcgccgccgcaatatttatgatgtttttttactcggcgcttgattcaccttgttacagattgctattgtgtgcgcg                                                                                                                                                     >  2:443309‑M1/1‑148 (MQ=255)
                                                                                                     aTTCGCACCAAAACTGCATAAGAAGAAGTAAGATTCACCTGCAATTGCTTAGCCGCCGGGGTCAAACCTGGCGGCTTTTTTATGGCATTAAAAAGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCctgcccgtcttaaacaaccgtcgctttgcgccgccgcaattattatgatgtttttttactcggcgcttgattcaccttgttacagattgctattgtgtgcgcg                                                                                                                                                     >  2:51037‑M1/1‑148 (MQ=255)
                                                                                                        ggcACAAAAACTGAATAAGCAGAAGTAAGAGTCCTCTGCAATTCATTGTCCGCGGGGTTCAAACCTGGCGGTTTTTTTATGGCATTAAAAGGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGATATTTATTCTGGCAATTAACGCctgcccggcttaaacaaccgtcgctttgcgccgccgcaattattatgatgtttttttactcggcgcttgattcaccttgttacagattgctattgtgtgcgcgcg                                                                                                                                                   <  2:317782‑M1/249‑106 (MQ=255)
                                                                                                          cACCAAAACGGCAAAAGAAGAAGTAAGATTCACCTGCAATTGCTTAGCCGCCGGGGTAAAACCGGGCGGCTTTTTTAGGGAATTAAAAAGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCctgcccgtcttaaacaaccgtcgctttgcgccgccgcaattattatgatgtttttttactcggcgcttgattcaccttgttacagattgctattgtgtgcgcgcgtcg                                                                                                                                                <  2:177179‑M1/251‑109 (MQ=255)
                                                                                                                                     aTTCACCTGCAATTGCTTAGCCGCAGGGGTCAAACCTGGCGGCTTTTTTATGGCATTAAAAAGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCctgcccgtcttaaacaaccgtcgctttgcgccgccgcaattattatgatgtttttttactcggcgcttgattcaccttgttccagattgctattgtgtgcgcgcgtcgaatgaccgttaatattctctggttttt                                                                                                                     >  2:110500‑M1/1‑116 (MQ=255)
                                                                                                                                      ttcccctgcaATTGCTTAGCCGCCGGGGTCAACCCTGGCGGCTTTTTTAGGGCATTAAAAAGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCctgcccgtcttaaacaaccgtcgctttgcgccgccgcaattattatgatgtttttttactcggcgcttgattcaccttgttacagattgctattgtgtgcgcgcgtcgaatgaccgttaatattctctggttttt                                                                                                                     <  1:299881‑M1/246‑136 (MQ=255)
                                                                                                                                               aaTTGCTTAGCCGCCGGGGTCAAACCTGGCGGTTTTTTTATGGCATTAAAAAGCCCCGCCGGGATGGCTGCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCctgcccgtcttaaacaaccgtcgctttgcgccgccgcaattattatgatgtttttttactcggcgcttgattcaccttgttacagattgctattgtgtgcgcgcgtcgaatgaccgttaatattctctggtttttaaggcgcgtt                                                                                                           <  2:156870‑M1/251‑146 (MQ=255)
                                                                                                                                                         ccgccgGGGTCAAACCTGGCGGCTTTTTTATGGCATTAAAAAGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCctgcccgtcttaaacaaccgtcgctttgcgccgccgcaattattatgatgtttttttactcggcgcttgattcaccttgttacagattgctattgtgtgcgcgcgtcgaatgaccgttaatattctctggtttttaaggcgcgttctgttgccgg                                                                                                 >  1:119737‑M1/1‑96 (MQ=255)
                                                                                                                                                                 gtaaaacctGGCGGCTTTTTTATGGCATTAAAAAGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCctgcccgtcttaaacaaccgtcgctttgcgccgccgcaattattatgatgtttttttactcggcgcttgattcaccttgttacagattgctattgtgtgcgcgcgtcgaatgaccgttaatattctctggtttttaaggcgcgttctgttgccggttatatgt                                                                                         <  2:98193‑M1/248‑164 (MQ=255)
                                                                                                                                                                   cAAACCTGGCGGCTTTTTTATGGCCTTAAAAAACCCTGTCGGGCTGGCAGCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCctgcccgtcttaaacgaccgtcgctttgcgacgcagcaattcttatgatgtttttttaatcggcgcttgattcacctagttacagattgctattgtgtgcgcgcgtcgaatgaccgttaattctctctggtttttaaggcgagttctgttaccggttatctgtc                                                                                        >  2:406182‑M1/1‑86 (MQ=255)
                                                                                                                                                                   cAAACCTGGCGGCTTTTTTATGGCATTAAAAAGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCctgcccgtcttaaacaaccgtcgctttgcgccgccgcaattattatgatgtttttttactcggcgcttgattcaccttgttacagattgctattgtgtgcgcgcgtcgaatgaccgttaatattctctggtttttaaggcgcgttctgttgccggttatatgtca                                                                                       <  1:448476‑M1/251‑166 (MQ=255)
                                                                                                                                                                             ggcTTTTTTATGGCATTAAAACGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCctgcccgtcttaaacaaccgtcgctttgcgccgccgcaattattatgatgtttttttactcggcgcttgattcaccttgttacagattgctattgtgtgcgcgcgtcgaatgaccgttaatattctctggtttgtaaggcgcgttctgttgccggttatatgtcaagaaggtatc                                                                             <  1:311445‑M1/251‑176 (MQ=255)
                                                                                                                                                                                                 aaGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGATTCTTATTCTGGCAATTAACGCctgcccgtcttaaacaaccgtcgctttgcgccgccgcaattattatgatgtttttttactcggcgcttgattcaccttgttacagattgctattgtgtgcgcgcgtcgaatgaccgttaatattctctggtttttaaggcgcgttctgttgccggttatatgtcaagaaggtatctatgggtgagattagtatta                                                         <  1:175169‑M1/251‑196 (MQ=255)
                                                                                                                                                                                                   cccccgCCGGGATGGCTCCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCctgcccgtcttaaacaaccgtcgctttgcgccgccgcaattattatgatgtttttttactcggcgcttgattcaccttgttacagattgctattgtgtgcgcgcgtcgaatgaccgttaatattctctggtttttaaggcgcgttctgttgccggttatatgtcaagaaggtatctatgggtgagagtagtattacc                                                       <  1:342468‑M1/250‑198 (MQ=255)
                                                                                                                                                                                                        cccggGATGGCTCCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGGctgcccgtcttaagcaaccgtcgctttgcgccgccgcaagtattatgatgtttttttactcggcgcttgattcaccttgttacagattgctattgtgtgcgcgcgtcgaatgaccgttaatattctctggtttttaaggcgcgttctgttgccggttatatgtcatgaaggtatctatgggtgagattagtatgaccaaact                                                  <  1:406182‑M1/250‑203 (MQ=255)
                                                                                                                                                                                                                       ggCAGGGCGGGATTCTTATTCTGGCAATTAACGCctgcccgtcttaaacaaccgtcgctttgcgccgccgcaattattatgatgtttttttactcggcgcttgattcaccttgttacagattgctattgtgtgcgcgcgtcgaatgaccgttaatattctctggtttttaaggcgcgttctgttgccggttatatgtcaagaaggtatctatgggtgagattagtattaccaaactgctggtagttgcggc                                   <  2:108846‑M1/251‑218 (MQ=255)
                                                                                                                                                                                                                          aGGGCGGTATCCTTATTCTGGCAATTAACGCctgcccgtcttaaacaaccgtcgctttgcgccgccgcaattattatgatgtttttttactcggcgcttgattcaccttgttacagattgctattgtgtgcgcgcgtcgaatgaccgttaatattctctggtttttaaggcgcgttctgttgccggttatatgtcaagaaggtatctatgggtgagattagtattaccaaactgctggtagttgcggcgct                                <  1:366395‑M1/251‑221 (MQ=255)
                                                                                                                                                                                                                              cGGGATACTTATTCTGGCAATTAACGCctgcccgtcttaaacaaccgtcgctttgcgccgccgcaattattatgatgtttttttactcggcgcttgattcaccttgttacagattgctattgtgtgcgcgcgtcgaatgaccgttaatattctctggtttttaaggcgcgttctgttgccggttatatgtcaagaaggtatctatgggtgagattagtattaccaaactgctggtagttgcggcgctggtc                            >  1:329588‑M1/1‑27 (MQ=255)
                                                                                                                                                                                                                                     cTTATTCTGGCAATTAACGCctgcccgtcttaaacaaccgtcgctttgcgccgccgcaattattatgatgtttttttactcggcgcttgattcaccttgttacagattgctattgtgtgcgcgcgtcgaatgaccgttaatattctctggtttttaaggcgcgttctgttgccggttatatgtcaagaaggtatctatgggtgagattagtattaccaaactgctggaagttgcggcgctggtagttctgc                     >  2:323945‑M1/1‑20 (MQ=255)
                                                                                                                                                                                                                                             ggCAATTAACGCctgcccgtcttaaacaaccgtcgctttgcgccgccgcaattattatgatgtttttttactcggcgcttgattcaccttgttacagattgctattgtgtgcgcgcgtcgaatgaccgttaatattctctggtttttaaggcgcgttctgttgccggttatatgtcaagaaggtatctatgggtgagattagtattaccaaactgctggtagttgcggcgctggtcgttctgctgtttg               <  1:255068‑M1/249‑238 (MQ=255)
                                                                                                                                                                                                                                                        cctgcccgtcttaaacaaccgtcgctttgcgccgccgcaattattatgatgtttttttactcggcgcttgattcaccttgttacagattgctattgtgtgcgcgcgtcgaatgaccgttaatattctctggtttttaaggcgcgttctgttgccggttatatgtcaagaaggtatctatgggtgagattagtattaccaaactgctggtagttgcggcgctggtcgttctgctgtttgggcctaagaagtt  >  2:42529‑M1/1‑1 (MQ=255)
                                                                                                                                                                                                                                                        cctgcccgtcttaaacaaccgtcgctttgcgccgccgcaattattatgatgtttttttactcggcgcttgattcaccttgttacagattgctattgtgtgcgcgcgtcgaatgaccgttaatattctctggtttttaaggcgcgttctgttgccggttatatgtcaagaaggtatctatgggtgagattagtattaccaaactgctggtagttgcggcgctggtcgttctgctgtttgggactaagaagct  >  2:81366‑M1/1‑1 (MQ=255)
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                          
GCGTGTTCGCAGCGGGTGACTGTACGACGGTTCCGTACAAGCAGATCATCATCGCCACTGGCGAAGGTGCCAAAGCCTCTCTGAGTGCTTTTGACTACCTGATTCGCACCAAAACTGCATAAGAAGAAGTAAGATTCACCTGCAATTGCTTAGCCGCCGGGGTCAAACCTGGCGGCTTTTTTATGGCATTAAAAAGCCCCGCCGGGATGGCTCCGGGCAGGGCGGGATACTTATTCTGGCAATTAACGCACAACCAGCACCGGCAGATTGGCGTGGCGGATCACGCTCGAGGCGTTAGAACCTAACAGATGGGTCGAAATCGATGGGTTGCGAGAACCAATAACTACAACATCAGCCCCCAGTTCTTCTGCCAACTCATTGACTTCATCCCGCACGCTACCAAAACGGACATGTTGTTTAATGCGGGAAGGATCGATGGTGAAGTGGCTGACCATCGTTTGCAGACGTTCTTGTGCTTCATGTTGCAGATGCTCTTCAA  >  NC_000913/641197‑641695

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: