| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,294,426 | Δ12,725 bp | adhE–[yciU] | adhE, ychT, ychE, insH21, oppA, oppB, oppC, oppD, oppF, [yciU] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1294426 | 1307150 | 12725 | 42 [0] | [1] 42 | adhE–[yciU] | adhE,ychT,ychE,insH21,oppA,oppB,oppC,oppD,oppF,[yciU] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1294425 | 0 (0.000) | 41 (0.630) | 37/476 | 0.3 | 100% | intergenic (+281/+1021) | tdk/adhE | thymidine/deoxyuridine kinase/fused acetaldehyde‑CoA dehydrogenase and iron‑dependent alcohol dehydrogenasealdehyde/alcohol dehydrogenase AdhE |
| ? | NC_000913 | 1307151 = | 0 (0.000) | intergenic (‑1/+34) | yciU/clsA | DUF440 domain‑containing protein YciU/cardiolipin synthase A | |||||
GACCAATCACCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGATTGAACAGCAGAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGTTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTGAAGAAGTAAAACAGTCGCTCGGCGACACGTTGCCATAATGGACGTTTTAGCCATAAACGGGCATCGAGCAGACGTGAACGCGAAATATAATCGTCCTGAACGGCGGCGAGGTCAGCACCAAAACCTTTATCGTCGATTGCCAGGGTAATCTCGAAATTTAGCCACAGACTACGCATATCAAGGTTAACTGTGCCAA > NC_000913/1306922‑1307396 | gttttacgcccttcttccgggctatatacccttctcggcagttttttaacgccgctatacgcctcacagggctcttaagcaccgacgttgacttgtgacctgtaaagtacaatatccctgtgtttaggcgttatacatcgtcgcaaatatgatgaaggctaatgctgtcggtttatggaaaagtttctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTTCCTGTTTAACctct < 2:19680‑M2/22‑1 (MQ=255) cacttcttccgggctatatacccttctcggcagttttttaacgccgctatacgcctcacagggctcttaagcaccgacgttgacttgtgacctgtaaagtacaatatccctgtgtttaggcgttatacatcgtcgcaaatatgatgaaggctaatgctgtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTTGCg > 1:143133‑M2/222‑250 (MQ=255) cacttcttccgggctatatacccttctcggcagttttttaacgccgctatacgcctcacagggctcttaagcaccgacgttgacttgtgacctgtaaagtacaatatccctgtgtttaggcgttatacatcgtcgcaaatatgatgaaggctaatgctgtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGcgc > 1:46873‑M2/222‑250 (MQ=255) ccttcttccgggctatatacccttctcggcagttttttaacgccgctatacgcctcacagggctcttaagcaccggcgttgacttgtgacctgtaaagtacaatatccctgtgtttaggcgttatacatcgtcgcaaatatgatgaaggctaatgctgtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGAc < 2:442726‑M2/31‑1 (MQ=255) tccgggctatatacccttctcggcagttttttaacgccgctatacgcctcacagggctcttaagcaccgacgttgacttgtgacctgtaaagtacaatatccctgtgtttaggcgttatacatcgtcgcaaatatgatgaaggctaatgctgtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGtttt < 2:213041‑M2/36‑1 (MQ=255) ccgggctatatacccttctcggcagttttttaacgccgctatacgcctcacagggctcttaagcaccgacgttgacttgtgacctgtaaagtacaatatccctgtgtttaggcgttatacatcgtcgcaaatatgatgaaggctaatgctgtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTAc > 1:485714‑M2/214‑251 (MQ=255) atatacccttctcggcagttttttaacgccgctatacgcctcacagggctcttaagcaccgacgttgacttgtgacctgtaaagtacaatatccctgtgtttaggcgttatacatcgtcgcaaatatgatgaaggctaatgctgtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTAAAGCAACg > 1:486687‑M2/207‑251 (MQ=255) ctcggcagttttttaacgccgctatacgcctcacagggctcttaagcaccgacgttgacttgtgacctgtaaagtacaatatccctgtgtttaggcgttatacatcgtcgcaaatatgatgaaggctaatgctgtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTgaaga > 2:136325‑M2/197‑250 (MQ=255) ctcggcagttttttaacgccgctatacgcctcacagggctcttaagcaccgacgttgacttgtgacctgtaaagtacaatatccctgtgtttaggcgttatacatcgtcgcaaatatgatgaaggctaatgctgtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggaaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAAAGGACTgaaga > 2:373414‑M2/197‑250 (MQ=255) tttttaacgccgctatacgcctcacagggctcttaagcaccgacgttgacttgtgacctgtaaagtacaatatccctgtgtttaggcgttatacatcgtcgcaaatatgatgaaggctaatgctgtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTGAAGAAGTAAAACa < 1:136325‑M2/63‑1 (MQ=255) acgccgctatacgcctcacagggctcttaagcaccgacgttgacttgtgacctgtaaagtacaatatccctgtgtttaggcgttatacatcgtcgcaaatatgatgaaggctaatgctgtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTGAAGAAGTAAAACAGTCGCTc > 1:112132‑M2/182‑251 (MQ=255) gccgctataagcaacacagggctcttaagcaccgccgttgacttgtgacctctaaagtacaatatccctgtgcttacgcgttatacatcgtcgcaaatacgatgaaggctaatgctgtcggtttatggaaaagttgcttcgggcaaacaaaaaatacggccccagaagggcaatgacgtAGTTACTACATGTTTAACCTCAGGTGGCGACGCTTTACAGCCACGGACTTAAGAAGTAAAACAGTAGCTCgg > 2:162724‑M2/180‑251 (MQ=255) gctatacgcctcacagggctcttaagcaccgacgttgacttgtgacctgtaaagtacaatatccctgtgtttaggcgttatacatcgtcgcaaatatgatgaaggctaatgctgtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTGAAGAAGTAAAACAGTCGCTCGGCg > 1:238437‑M2/177‑250 (MQ=255) atacgcctcacagggctcttaagcaccgacgttgacttgtgacctgtaaagtacaatatccctgtgtttaggcgttatacatcgtcgcaaatatgatgaaggctaatgctgtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTGAAGAAGTAAAACAGTCGCTCGGCGacac < 1:97445‑M2/78‑1 (MQ=255) cgcctcacagggctcttaagcaccgacgttgacttgtgacctgtaaagtacaatatccctgtgtttaggcgttatacatcgtcgcaaatatgatgaaggctaatgctgtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCCACGGACTGAAGAAGTAAAACAGTCGCTCGGCGACACGtt > 1:253965‑M2/171‑251 (MQ=255) cgcctcacagggctcttaagcaccgacgttgacttgtgacctgtaaagtacaatatccctgtgtttaggcgttatacatcgtcgcaaatatgatgaaggctaatgctgtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTGAAGAAGTAAAACAGTCGCTCGGCGACACGtt < 1:221923‑M2/81‑1 (MQ=255) cacagggctcttaagcaccgacgttgacttgtgacctgtaaagtacaatatccctgtgtttaggcgttatacatcgtcgcaaatatgatgaaggctaatgctgtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTGAAGAAGTAAAACAGTCGCTCGGCGACACGTTGCCAt < 1:94720‑M2/86‑1 (MQ=255) ggacttgtgacctgtaaagtacaatatccctttgtttaggcgttatacatcgtcgcaaatatgatgaagtctaatgctgtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaaggccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTGAAGAAGTAAAACAGTCGCTCGGCGACGCGTTGCCATAATGGACGTTTTAGCCATAAAcgt < 2:320834‑M2/110‑2 (MQ=255) gacttgtgacctgtaaagtacaatatccctgtgtttaggcgttatacatcgtcgcaaatatgatgaaggctaatgctgtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTGAAGAAGTAAAACAGTCGCTCGGCGACACGTTGCCATAATGGACGTTTTAGCCATaaacagg > 2:452412‑M2/141‑248 (MQ=255) tgtgacctgtaaagtacaatatccctgtgtttaggcgttatacatcgtctcaaatatgatgaaggctaatgctgtcggtttatggaaaagttgctttgggtaatcaaaaaatacggccccagaagggcaatgccgtATTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTGAAGAAGTAAAACAGTCGCTCGGCGACACGTTGCCATAATGGACGTTTTAGCCATAAACGGGCa < 1:237962‑M2/113‑1 (MQ=255) tgtgacctgtaaagtacaatatccctgtgtttaggcgttatacatcgtcgcaaatatgatgaaggctaatgctgtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTGAAGAAGTAAAACAGTCGCTCGGCGACACGTTGCCATAATGGACGTTTTAGCCATAAACGGGCAt < 2:47784‑M2/114‑1 (MQ=255) aagtacaatatccctgtgtttaggcgttatacatcgtcgcaaatatgatgaaggctaatgctgtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTGAAGAAGTAAAACAGTCGCTCGGCGACACGTTGCCATAATGGACGTTTTAGCCATAAACGGGCATCGAGCAGACGTg > 2:296255‑M2/126‑251 (MQ=255) acaatatccctgtgtttaggcgttatacagcntcgcaaatatgatgaaggctaatgctgtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTGAAGAAGTAAAACAGTCGCTCGGCGACACGTTGCCATAATGGACGTTTTAGCCATAAACGGGCATCGAGCAGACGTGAAcg < 2:255086‑M2/130‑1 (MQ=255) ccctgtgtttaggcgttatacatcgtcgcaaatatgatgaaggctaatgctgtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCt > 2:52124‑M2/115‑125 (MQ=255) ccctgtgtttaggcgttatacatcgtcgcaaatatgatgaaggctaatgctgtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCt < 1:52124‑M2/11‑1 (MQ=255) cgttatacattgtcgcaaatatgatgaaggctaaggctgtcggtttatggaaaagttgctttgggtaaacaaaaaatacggtcccagaagggcaatgccgtAGTTACTACCTGTTCAACCTCTGTTGGCGACGTTTTACAGCATCGGACTGAAGAAGTAAAACAGTCGCTCGGCGACACGTTGCCATAATTGTCGTTTTAGCCATACACGGGCATCGAGCAGACGTGAACGCGAAATATAATCGTCCTGaa < 1:328466‑M2/150‑1 (MQ=255) acatcgtcgcaaatatgatgaaggctaatgctgtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACTGACTGAAGAAGTAAAACAGTCGCTCGGCGACACGTTGCCATAATGGACGTTTTAGCCATAAACGGGCATCGAGCAGACGTGAACGCGAAATATAATCGGCCTGAAcggcg < 2:277725‑M2/155‑1 (MQ=255) cgcaaatatgatgaaggctaatgctgtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTGAAGAAGTAAAACAGTCGCTCGGCGACACGTTGCCATAATGGACGTTTTAGCCATAAACGGGCATCGAGCAGACGTGAACGCGAAATATAATCGTCCTGAACGGCGGCGAGGTc < 2:112132‑M2/163‑1 (MQ=255) tgatgaaggctaatgcggtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTGAAGAAGTAAAACAGTCGCt > 2:319796‑M2/81‑149 (MQ=255) tgatgaaggctaatgcggtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTGAAGAAGTAAAACAGTCGCt < 1:319796‑M2/69‑1 (MQ=255) gctaatgctgtcggtttatggaaacgttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTCCAGCAACGGACTGAAGAAGTAAAACAGTCGCTCGGCGACACGTTGCCATAATGGACGTTTTAGCCATAAACGGGCATCGAGCAGACGTGAACGCGAAATATAATCGGCCTGAACGGCGGAGAGGTCCGCCCCAAAACCttt > 2:411323‑M2/73‑250 (MQ=255) gctaatgctgtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTGAAGAAGTAAAACAGTc > 1:107222‑M2/73‑138 (MQ=255) gctaatgctgtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTGAAGAAGTAAAACAGTc < 2:107222‑M2/66‑1 (MQ=255) ctaatgctgtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTGAAGAAGTAAAACAGTCGCTCGGCGACACGTTGCCATAATGGACGTTTTAGCCATAAACGGGCATCGAGCAGACGTGAACGCGAAATATAATCGTCCTGAACGGCGGCGAGGTCAGCACCAAAACCTTTAt > 1:119682‑M2/72‑251 (MQ=255) gctgtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTGAAGAAGTAAAACAGTCGCTCGGCGACACGTTGCCATAATGGACGTTTTAGCCATAAACGGGCATCGAGCAGACGTGAACGCGAAATATAATCGTCCTGAACGGCGGCGAGGTCAGCACCAAAACCTTTAtcgtc < 1:278421‑M2/184‑1 (MQ=255) gtcggtttatggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTGAAGAAGTAAAACAGTCGCTCGGCGACACGTTGCCATAATGGACGTTTTAGCCATAAACGGGCATCGAGCAGACGTGAACGCGAAATATAATCGTCCTGAACGGCGGCGAGGTCAGCACCAAAACCTTTATCGTCGAtt < 1:164102‑M2/188‑1 (MQ=255) atggaaaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTGAAGAAGTAAAACAGTCGCTCGGCGACACGTTGCCATAATGGACGTTTTAGCCATAAACGGGCATCGAGCAGACGTGAACGCGAAATATAATCGTCCTGAACGGCGGCGAGGTCAGCACCAAAACCTTTATCGTCGATTGCCAggg < 1:139818‑M2/195‑1 (MQ=255) aaagttgctttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTGAAGAAGTAAAACAGTCGCTCGGCGACACGTTGCCATAATGGACGTTTTAGCCATAAACGGGCATCGAGCAGACGTGAACGCGAAATATAATCGTCCTGAACGGCGGCGAGGTCAGCACCAAAACCTTTATCGTCGATTGCCAGGGTAAtct < 1:296255‑M2/201‑1 (MQ=255) gttttgggtaaacaaaaaattcggccccagaagggcaatgccgtATGTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTGAAGAAGTAAAACAGTCGCTCGGCGACACGGTGCCATAATGGACGTTTTAGCCATAAACGGGCATCGAGCAGACGTGAACGCGAAATATAATCGTCCTGAACGGCGTCGAGGTTAGCACCAAAACCTTTATCGTCGATTGCCAGGGTAATCTCGAAAt < 2:485714‑M2/207‑1 (MQ=255) tttgggtaaacaaaaaatacggccccagaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTGAAGAAGTAAAACAGTCGCTCGGCGACACGTTGCCATAATGGACGTTTTAGCCATAAACGGGCATCGAGCAGACGTGAACGCGAAATATAATCGTCCTGAACGGCGGCGAGGTCAGCACCAAAACCTTTATCGTCGATTGCCAGGGTAATCTCGAAAtt < 1:297681‑M2/208‑1 (MQ=255) agaagggcaatgccgtAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTGAAGAAGTAAAACAGTCGCTCGGCGACACGTTGCCATAATGGACGTTTTAGCCATAAACGGGCATCGAGCAGACGTGAACGCGAAATATAATCGTCCTGAACGGCGGCGAGGTCAGCACCAAAACCTTTATCGTCGATTGCCAGGGAAATCTCTAAATTTAGCCACAGACTACGCATATCAAGGtt > 2:276169‑M2/17‑251 (MQ=255) gccttaGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTGAAGAAGTAAAACAGTCGCTCGGCGACACGTTGCCATAATGGACGTTTTAGCCATAAACGGGCATCGAGCAGACGTGAACGCGAAATATAATCGTCCTGAACGGCGGCGAGGTCAGCACCAAAACCTTTATCGTCGATTGCCAGGGTAATCTCGAAATTTAGCCACAGACTACGCATATCAAGGTTAACTGTGCCaa < 1:265612/247‑1 (MQ=255) | GACCAATCACCACTTCGGCAAAAAAGTCCGGGTTCAAATCGAAATCAACATGTTCCTGCCAGTCTTCCGCCGGATCGAATAACTCCGCGCCGCCGCGCTCTTCAAACTGAAGATTGAACAGCAGAACATCAGCTGGATCGAGATTGTCGGCAGCCAGTTCGAGAAAAATATCGTAGGCCTGTTCAAGCGTTTCATCTTCAGTCAGGCGATTGTTTAGATCCATATCCATAGTTACTACCTGTTTAACCTCTGTTGGCGACGTTTTACAGCAACGGACTGAAGAAGTAAAACAGTCGCTCGGCGACACGTTGCCATAATGGACGTTTTAGCCATAAACGGGCATCGAGCAGACGTGAACGCGAAATATAATCGTCCTGAACGGCGGCGAGGTCAGCACCAAAACCTTTATCGTCGATTGCCAGGGTAATCTCGAAATTTAGCCACAGACTACGCATATCAAGGTTAACTGTGCCAA > NC_000913/1306922‑1307396 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |