| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,877,974 | Δ183 bp | intergenic (+356/+413) | iap → / ← cas2 | alkaline phosphatase isozyme conversion protein/CRISPR‑associated endoribonuclease Cas2 |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2877974 | 2878156 | 183 | 24 [0] | [4] 28 | iap/cas2 | alkaline phosphatase isozyme conversion protein/CRISPR‑associated endoribonuclease Cas2 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2877973 | 0 (0.000) | 24 (0.420) | 23/420 | 0.8 | 100% | intergenic (+355/+596) | iap/cas2 | alkaline phosphatase isozyme conversion protein/CRISPR‑associated endoribonuclease Cas2 |
| ? | NC_000913 | 2878157 = | 0 (0.000) | intergenic (+539/+412) | iap/cas2 | alkaline phosphatase isozyme conversion protein/CRISPR‑associated endoribonuclease Cas2 | |||||
AAATCTCACCGTCGTTGCCGGTTTATCCCTGCTGGCGCGGGGAACTCTCGGTTCAGGCGTTGCAAACCTGGCTACCGGGCGGTTTATCCCCGCTAACGCGGGGAACTCGTAGTCCATCATTCCACCTATGTCTGAACTCCCGGTTTATCCCCGCTGGCGCGGGGAACTCCCGGGGGATAATGTTTACGGTCATGCGCCCCCCGGTTTATCCCCGCTGGCGCGGGGAACTCTGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATT > NC_000913/2877744‑2878187 | atatcTCACCTTCGTTGCCGGTTTATCCCTGCTGGCGCGGGGAACTCTCGGTTCAGGCGTTGCAAACCTGGCTACCGGGCGGTTTATCCCCGCTAACGCGGGGAACTCGTAGTCCATCATTCCACCTATGTCTGAACTCCCGGTTTATCCCCGCTGGCGCGGGGAACTCCCGGGGGATAATGTTTACGTTCATGCGCCCCCCGGTTTATCCCCGCTGGCGCGGGGAACTCgcaggcggcgacgcgcagggt < 2:123542‑M1/249‑22 (MQ=255) aatctctgcttcgttgccggtttaTCCCTGCTGGGGCGGTGAAACCTCGGTTCAGGCGTTGCAAACCTGGCTTCCGGACTGTGTATCCCCGCTCACGCGGGGAACGCATAGTACATCATTCCGCCTATGTCTGAACTCGCGGTTTATCCCCGATGGCGCGGGGAACTCCCGGGGGATAATGTTTACGGTCATGAGCCCCCCGGTTTATCCCCGCTGGCGCGGGGAACTCgcaggcggcgacgcgcagggta < 2:210554‑M1/241‑23 (MQ=255) ccGTCGTTGCCGGTTTATCCCTGCTGGCGCGGGGAACTCTCGGTTCAGGCGTTGCAAACCTGGCTACCGGGCGGTTTATCCCCGCTAACGCGGGGAACTCGTAGTCCATCATTCCACCTATGTCTGAACTCCCGGTTTATCCCCGCTGGCGCGGGGAACTCCCGGGGGATAATGTTTACGGTCATGCGCCCCCCGGTTTATCCCCGCTGGCGCGGGGAACTCgcaggcggcgacgcgcagggtatgcgcga < 1:109071‑M1/251‑30 (MQ=255) aTCCCTGCTGGCGCGGGGAACTCTCGGTTCAGGCGTTGCAAACCTGGCTACCGGGCGGTTTATCCCCGCTAACGCGGGGAACTCGTAGTCCATCATTCCACCTATGTCTGAACTCCCGGTTTATCCCCGCTGGCGCGGGGAACTCCCGGGGGATAATGTTTACGGTCATGCGCCCCCCGGTTTATCCCCGCTGGCGCGGGGAACTCgcaggcggcgacgcgcagggtatgcgcgattcgcggtttatccc < 1:122234‑M1/250‑45 (MQ=255) aTCCCTGCTGGCGCGGGGAACTCTCGGTTCAGGCGTTGCAAACCTGGCTACCGGGCGGTTTATCCCCGCTAACGCGGGGAACTCGTAGTCCATCATTCCACCTATGTCTGAACTCCCGGTTTATCCCCGCTGGCGCGGGGAACTCCCGGGGGATAATGTTTACGGTCATGCGCCCCCCGGTTTATCCCCGCTGGCGCGGGGAACTCgcaggcggcgacgcgcagggtatgcgcgattcgcggtttatccc < 1:497167‑M1/250‑45 (MQ=255) ccTGCGGGCGCGGGGAACTCTCGGTTCAGGCGTGGCAATCCGGGCTACCGGGCGGTTTATCCCCGCTAACGCGGGGAACTCGGAGTCCATCATTCCACCGATGTCTGAACTCCCGGTTTATCCCCGCTGGCGCGGGGAACTCCCGGGGGAGAATGTTTACGGTCATGCGCCCCCCGGTTTATCCCCGCTGGCGCGGGGAACTCgcaggcggcgacgcgcagggtatgcgcgattcgtggtttatccccgct < 2:67630‑M1/251‑49 (MQ=255) gAACTCTCGGTTCAGGCGTTGCAAACCTGGCTACCGGGCGGTTTATCCCCGCTAACGCGGGGAACTCGTAGTCCATCATTCCACCTATGTCTGAACTCCCGGTTTATCCCCGCTGGCGCGGGGAACTCCCGGGGGATAATGTTTACGGTCATGCGCCCCCCGGTTTATCCCCGCTGGCGCGGGGAACTCgcaggcggcgacgcgcagggtatgcgcgattcgcggtttatccccgctggcgcggggaactc < 1:459643‑M1/251‑63 (MQ=255) aaCTCTCGGTTCAGGCGTTGCAAACCTGGCTACCGGGCGGTTTATCCCCGCTAACGCGGGGAACTCGTAGTCCATCATTCCACCTATGTCTGAACTCCCGGTTTATCCCCGCTGGCGCGGGGAACTCCCGGGGGATAATGTTTACGGTCATGCGCCCCCCGGTTTATCCCCGCTGGCGCGGGGAACTCgcaggcggcgacgcgcagggtatgcgcgattcgcggtttatccccgctggcgcggggaactcg > 2:333644‑M1/1‑188 (MQ=255) cAGGCGTTGCAAACCTGGCTACCGAGCGGTTTATCCCCGCTAACGCGGGGAACTCGTCGTCCATCATTCCACCTATGTCTGAACTCCCGGTTTATCCCCGCTGGCGCGGGGAACTCCCGGGGGATAATGTTTACGGTCATGAGCCCCCCGGTTTATCCCCGCTGGCGCGGGGAACTCgcaggcggcgacgcgcagggtatgcgcgattcgcggtttatccccgctggcgcggggaactcgcgaccgctc > 1:197901‑M1/1‑177 (MQ=255) ggCGTGGCAAACCTGGCTCCCGGGCAGGTTATCCCCGGTGACGCGGGGAACTCGTAGTCCATCATTCCTCCTATGTCTGCACTCCCGGTTTATCCCCGCTGGCGGGGGGAACTCCCGGGGGATAATGTTTACGGTCATGCGCCCCCCGGTTTATCCCCGCTGGCGCGGGGAACTCgcaggcggcgacgcgcagggtatgcgcgattcgcggtttatccccgctggcgcggggaactcgcgaccgctcagaa < 2:115165‑M1/251‑77 (MQ=255) gggCGGTGTATCCCCGCTAACGCGGGGAACTCGTAGTCCATCATTCCACCTATGTCGGAACTCCCGGTTTATCCCCGCGGGCGCGGGGAACTCCCGGGGGATAATGTTTACGGTCATGCGCCCCCCGGTTTATCCCCGCTGGCGCGGGGAACTCgcaggcggcgacgcgcagggtatgcgcgattcgcggtttatccccgctggcgcggggaactcgcgaccgctcagaaattccagacccgatccaaacg < 2:61959‑M1/251‑98 (MQ=255) ggTTTATCCCCGCTAACGCGGGGAACTCGTANTCCATCATTCCACCTATGTCTGAACTCCCGGTTTATCCCCGCTGGCGCGGGGAACTCCCGGGGGATAATGTTTACGGTCATGCGCCCCCCGGTTTATCCCCGCTGGCGCGGGGAACTCgcaggcggcgacgcgcagggtatgcgcgattcgcggtttatccccgctggcgcggggaactcgcgaccgctcagaaattccagacccgatccaaacggttt < 2:225415‑M1/251‑102 (MQ=255) ttATCCCCGCTAACGCGGGGAATTCGTAGTCCATCATTCCACCTATGTCTGAACGCCCGGTTTATCCCCGCTGGCGCGGGGAACTCCCGGGGGATAATGTTTACGGTCATGCGCCCCCCGGTTTATCCCCGCTGGCGCGGGGAACTCgcaggcggcgacgcgcagggtatgcgcgattcgcggtttatccccgctggcgcggggaactcgcgaccgctcagaaattccagacccgatccaaacggtttat < 2:108215‑M1/250‑104 (MQ=255) ggAACGCGTAGTCCATCATTCCACCTATGTCTGAACTCCCGGTTTATCCCCGCTGGCGCGGGGAACTCCCGGGGGATAATGTTTACGGTCATGCGCCCCCCGGTTTATCCCCGCTGGCGCGGGGAACTCgcaggcggcgacgcgcagggtatgcgcgattcgcggtttatccccgctggcgcggggaactcgcgaccgctcagaaattccagacccgatccaaacggtttatccccgctggcgcggggaac < 1:294144‑M1/251‑123 (MQ=255) aCTCCCGGTTTATCCCCGCTGGCGCGGGGAACTCCCGGGGGATAATGTTTACGGTCATGCGCCCCCCGGTTTATCCCCGCTGGCGCGGGGAACTCgcaggcggcgacgcgcagggtatgcgcgattcgcggtttatccccgctggcgcggggaactcgcgaccgctcagaaattccagacccgatccaaacggtttatccccgctggcgcggggaactctcaacattatcaattacaaccgacagggagcc < 1:317953‑M1/251‑157 (MQ=255) cccGGTTTATCCCCGCTGGCGCGGGGAACTCCCGGGGGATAATGTTTACGGTCATGCGCCCCCCGGTTTATCCCCGCTGGCGCGGGGAACTCgcaggcggcgacgcgcagggcatgcgcgattcgcggtttatccccgctggcgcggggaactcgcgaccgctcagaaattccagacccgatccaaacggtttatccccgctggcgcggggaactctcaacattatcaattacaaccgacagggagccc < 1:417777‑M1/249‑158 (MQ=255) aTCCCCGCTGGCGCGGGGAACTCCCGGGGGATAATGTTTACGGTCAAGCGCCCCCCGGTTTATCCCCGCTGGCGCGGGGAACGCgcaggcggcgacgcgcagggtatgcgcgattcgcggtttatctccgctggcgcggggaactcgcgaccgctcagaaattccagacccgatccaaacggtttatccccgctggcgcggggaactctcaacattatcaattacaaccgacaggtagcccggtttatcc < 1:78646‑M1/250‑167 (MQ=255) gcgGGGAACTCCTGGGGTATAATGTTGACGGTCATTCGCCCCCCGTTTGATCCCCGCTGGCGCGGGGAACTCgctggcggcgacgcgcagggtatgcgcgattcgcggtttatccccgctgtctcggggaactcgcgaccgctcagaaattccagtcccgatccaaacggtttatccccgctggcgcggggaactctcaacatgatcaattacaaccgacagggagccctggttatcaccgctggcgcggg < 2:38290‑M1/251‑180 (MQ=255) gacctccCGGGGGCTAATGTGTACGGTCAGGCGCCCCCCGGTTTATCCCCGCTGGCGCGGGGAACGCgcaggcggcgacgggcagggtatgctggattcgcggtttatccccgctggcgcggggaactcgcgaccgctcagaaattccagacccgatccaaacggtttatccccgctggcgcggggaactctcaacatgatcaattacaaccgacagggagcccggtttatccccgctggcgcggggaact < 2:433934‑M1/248‑185 (MQ=255) cccGGGGGATAATGTTTACGGTCATGCGCCCCCCGGTTTATCCCCGCTGGCGCGGGGAACTCgcaggcggcgacgcgcagggtatgcgcgattcgcggtttatccccgctggcgcggggaactcgcgaccgctcagaaattccagacccgatccaaacggtttatccccgctggcgcggggaactctcaacattatcaattacaaccgacagggagcccggtttatccccgctggcgcggggaactcag < 1:119596‑M1/249‑188 (MQ=255) ggtTTACGGTCATGCGCCCCCCGGTTTAGCCCCGCTGGCGCGGGGAACTCgcaggcggcgacgcgcagggtatgcgcgattcgcggtttatccccgctggcgcggggaactcgcgaccgctcagaaattccagacccgatccaaacggtttatccccgctggcgcggggaactctcaacattatcaattacaaccgacagggagcccggtttatccccgctggcgcggggaactcagcgtgttcggcatca < 2:320935‑M1/250‑202 (MQ=255) ttACGGTCATGCGCCCCCCGGTTTATCCCCGCTGGCGCGGGGAACTCgcaggcggcgacgcgcagggtatgcgcgattcgcggtttatccccgctggcgcggggaactcgcgaccgctcagaaattccagacccgatccaaacggtttatccccgctggcgcggggaactctcaacattatcaattacaaccgacagggagcccggtttatccccgctggcgcggggaactcagcgtgttcggcatcacc < 1:15966‑M1/250‑204 (MQ=255) cGGTCATGCGCCCCCCGGTTTATCCCCGCTGGCGCGGGGAACTCgcaggcggcgacgcgcagggtatgcgcgattcgcggtttctccccgctggcgcggggcactcgcgaccgctcagaaattacagacccgaaccaaacggtttatccccgcggacgcggggaactctcaacattatcaattacaaccgacaggggacccggtctatcccccccggcgcggggaactcagcgtgttctgcaacacctttt > 2:275889‑M1/1‑44 (MQ=255) gcgcCCCCCGGTTTTGCCCCGGTGGGGCGGGGAACTCgcaggcggcgacgcgcagggtatgcgcgattcgcggtttatccccgctggcgcggggaactcgcgaccgctcagaaattccagacccgatccaaacggtttatccccgctggcgcggggaactctcaacattatcaattacaaccgacagggagcccggtttatccccgctggcgcggggaactcagcgtgttcggcatcacctttggcttcgg < 2:164663‑M1/251‑215 (MQ=255) | AAATCTCACCGTCGTTGCCGGTTTATCCCTGCTGGCGCGGGGAACTCTCGGTTCAGGCGTTGCAAACCTGGCTACCGGGCGGTTTATCCCCGCTAACGCGGGGAACTCGTAGTCCATCATTCCACCTATGTCTGAACTCCCGGTTTATCCCCGCTGGCGCGGGGAACTCCCGGGGGATAATGTTTACGGTCATGCGCCCCCCGGTTTATCCCCGCTGGCGCGGGGAACTCTGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATT > NC_000913/2877744‑2878187 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |