| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,383,722 | 0 | G | A | 30.8% | 87.9 / 18.7 | 52 | F80F (TTC→TTT) | ycjW | DNA‑binding transcriptional repressor YcjW |
| Reads supporting (aligned to +/- strand): ref base G (27/9); new base A (0/16); total (27/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.97e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CGACAGAATAAACATGGGCATATTGACCTTCAACTTTGCCAATCACCACCACCGGAATATCATATTTATCGAGTTGGGCAAAAAATGACTCATCC‑GCTGGCGAACTGAGCATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTTCGCATTTTTGCAGATCTTCTGCCGGA‑TTGTGCGACGTTTGTAATATCACGTCGAAACCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACAT > NC_000913/1383472‑1383961 | cGACAGAATAAACATGGGCATATTGACCTTCAACTTTGCCAATCACCACCACCGGAATATCATATTTATCGAGTTGGGCAAAAAATGACTCATCC‑GCTGGCGAACTGAGCATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTTCGCATTTTTGCAGATCTTCTGCCGGA‑TTGTGCGACGTTTGTAATATCACGTCGAAACCTT‑CGTCTTCAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCagag < 1:521/251‑1 (MQ=255) aCAGAATAAACATGGGCATATTGACCTTCAACTTTGCCAATCACCACCACCGGAATATCATATTTATCGAGTTGGGCAAAAAATGACTCATCC‑GCTGGCGAACTGAGCATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTTCGCATTTTTGCAGATCGTCTGCCGGA‑TTGTGCGACGTTTGTAATATCACTTCGAAACCGT‑CTTCGTCATCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCAGAGaa < 2:894716/251‑1 (MQ=255) aTGGGCATATTGACCTTCAACTTTGCCAATCACCACCACCGGAATATCATATTTATCGAGTTGGGCAAAAAATGACTCATCC‑GCTGGCGAACTGAGCATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTTCGCATTTTTGCAGATCTTCTGCCGGA‑TTGTGCGACGTTTGTAATATCACGTCGAAACCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCAGAGAAAAACGGATTAc < 2:130461/251‑1 (MQ=255) cATATTGACCTTCAACTTTGCCAATCACCACCACCGGAATATCATATTTATCGAGTTGGGCAAAAAATGACTCATCC‑GCTGGCGAACTGAGCATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTTCGCATTTTTGCAGATCTTCTGCCGGA‑TTGTGCGACGTTTGTAATATCACGTCGAAACCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCAGAGAAAAACGGATTCCccgcc < 2:448040/251‑1 (MQ=255) ttGCCAATCACCACCACCGGAATATCATATTTATCGAGTTGGGCAAAAAATGACTCATCC‑GCTGGCGAACTGAGCATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTTCGCATTTTTGCAGATCTTCTGCCGGA‑TTGTGCGACGTTTGTAATATCACGTCGAAACCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCAGAGGAAAAAGGATTACCCGCCGTAGTTTTGGTCGAACg > 1:352140/1‑251 (MQ=255) ccAATCACCACCACCGGAATATCATATTTATCGAGTTGGGCAAAAAATGACTCATCC‑GCTGGCGAACTGAGCATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTTCGCATTTTTGCAGATCTTCTGCCGGA‑TTGTGCGACGTTTGTAATATCACGTCGAAACCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACgggg > 2:306898/1‑250 (MQ=255) caatccccccccccGGAATATCATATTTATCGAGTTGGGCAAAAAATGACTCACCC‑GCTGGCGAACTGAGCATAATAATGCTTTTAATCTTTTTCTGCTTAATTTTGCTTTCGCATTTTTGCAGATCTTCTGCCGGA‑TTGTGCGACGTTTGTAATACCCCGTCAAAACCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCAGAAAAAAACGTATTACCCGCCGTAGTTTTGGTCGAACGGGTa < 1:721163/239‑1 (MQ=255) ccccccccgaaaTATCATATTTATCGAGTTGGGAAAAAAATGA‑TCCTCCCGCTGGCGAACTGACCATAAAAATCCTTTTAATTTTTTTTTGCTTAATTTTGTTTTCCCTTTTTTGCAGATCTTCCGCCGTA‑TTGTGCGCCTTTTTTAATATCACGTCGAACCCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCAGGAAAAACTTCAGAAAAAACCGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATc < 2:617442/241‑1 (MQ=255) cccGGAATACTATATTTATCGGGTTGAGAAAAAAATGACTCCTCC‑GCGGGCAATCTGAACATAATAATCCTTTTAATCATTTTCTGTTTAATTTTGCTTTCGATTTTTTGCAGATCTTCTGCCGGT‑TTGTGCGCCTTTTGTAATATCACGTCAAAACCTT‑CTTCTTCAGCTTTGG‑CGGTGT‑TGGAATGCAAAACTTAAGAAAAAAACGTTTTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCAt < 1:146316/250‑1 (MQ=255) cATATTTATCGAGTTGGGCAAAAAATGACTCATCC‑GCTGGCGAACTGAGCATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTTCGCATTTTTGCAGATCTTCTGCCGGA‑TTGTGCGACGTTTGTAATATCACGTCGAAACCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATc > 1:539012/1‑250 (MQ=255) atatTTTTCAAGTTGGGCAAAAACTGCCTCTACC‑GCTGGCGAACTGAGCATAATAATCCCTTTAATCATTTTCTGTTAAATTTTGCTTTCGAATTTTTGCAGATCTGCTGCCGGT‑TTGTGCGGCGTTGTTAATATCACGACGAACCCTT‑CTCCTACAGCTTTGG‑GGGTGA‑TGGCGAAAAAAACTACAGAAAAAAACGTATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCa < 1:1037568/250‑1 (MQ=255) aTCGAGTTGGGCAAAAAATGACTCATCC‑GCTGGCGAACTGAGCATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTTCGCATTTTTGCAGATCTTCTGCCGGA‑TTGTGCGACGTTTGTAATATCACGTCGAAACCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACggg > 1:606465/1‑221 (MQ=255) gggCAAAAAATGACTCACCC‑GCTGGCGAACTGAGCATAATAATGCTTTTAATCATTTTCTGCTTAATTTTGCTTTCGCATTTTTGCAGATCTTCTGCGGGA‑TTGTGCGACGTTTGAAATATCACGTCGAAACTTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGAAAAACTTCAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTc < 1:1098033/251‑1 (MQ=255) gcaaaaaaaTGCCTCATCC‑GCGGGCGAACTGAGCATAATAATCCTTTTAATCTTTTTCTCCTTAATTTTTTTTGCGCTTTTTTGCATATCTTCTGCCGGG‑TTGTGCGGCGTTTGAAATATCACGTCGAAACCTT‑CTTCTTCATCTTTGG‑GTGTGA‑TGGCATGCAAACCTTCAGAAAAAAACGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCa < 2:944237/248‑1 (MQ=255) aaattgccTCATCC‑GCTGGGGAACGGAGCAAAATAATGCTTTTAATATTTTTCGTCTTAATTTGTCTTTATCTTTTTTGCAGTTCTTGTGCTGGT‑TGGGGCGACTTTTGTAAAATCACGACAAAACCTT‑CTTCTTCAGTTTGGG‑CGGTGA‑TGGATTGAAAATCTTAAAAAAAAAGCGGAATCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAgcgcg < 2:979739/244‑1 (MQ=255) aaTGACTCATCC‑GCTGGCGAACTGAGCATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTTCGCATTTTTGCAGATCTTCTGCCGGA‑TTGTGCGACGTTTGTAATATCACGTCGAAACCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGGCAGcgcgcg > 2:594015/1‑251 (MQ=255) cccgctggcaaacgggaaaaaaaattGCCTTTAATCTTTTTTTGTTTATTTTTGTTTTCGCATTTTTGCAGATCTTCTGCCGGA‑TTGGGCGACTTTTGAAATACCACGTCGAACCCTT‑CTTCTTCAGTTTGGG‑GGGTGA‑GGGAATGAAAAACTACAAAAAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCtt < 2:539012/226‑1 (MQ=255) aCTGAGCATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTTCGCATTTTTGCAGATCTTCTGCCGGA‑TTGTGCGACGTTTGTAATATCACGTCGAAACCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGAt > 2:1085499/1‑251 (MQ=255) cTGAGCATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTTCGCATTTTTGCAGATCTTCTGCCGGA‑TTGTGCGACGTTTGTAATATCACGTCGAAACCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGAt > 1:669184/1‑250 (MQ=255) cATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTTCGCATTTTTGCAGATCTTCTGCCGGA‑TTGTGCGACGTTTGTAATATCACGTCGAAACCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCAGAGAAAAACGGATTACCCTCCGTAGTTTTGGTCGAACGGGTAGaaa < 2:925266/185‑1 (MQ=255) cATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTTCGCATTTTTGCAGATCTTCTGCCGGA‑TTGTGCGACGTTTGTAATATCACGTCGAAACCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCAGAGAAAAACGGATTACCCTCCGTAGTTTTGGTCGAACGGGTAGaaa > 1:925266/1‑185 (MQ=255) gCCTTTAATCATTTTCTGCTTAATTTTGCTTTCGCATTTTTGCAGATCTTCTGCCGGA‑TTGTGCGACGTTTGTAATATCACGTCGAAACCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCa > 1:1145235/1‑250 (MQ=255) ccgtttttttttCTTCTTATTTTTGCTTCCTCTTTTTTGAAAATCTTCTGCGGTT‑TTGTAGGAGGTTTATAAAACCACGACAAACCCTT‑CTTCTTCAGTTTTGG‑GGGTGA‑TGACATACAAAACTTCAGAAAAAAACGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATgg < 2:617029/243‑1 (MQ=255) aaatatttttCTGCTTATTTTTGTTTCCGAATTTTTGAAGATCTTCTGCGGGA‑TTGTGCGACGTTTGTAATACCCCGTCGAACCTTT‑CTTTTTCAGCTTTGG‑CGGTGA‑GGGCATGAAAACCTTCAGAAAAAAACGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGc < 1:547614/244‑1 (MQ=255) aTTTTCTGCTTAATTTTGCTTTCGCATTTTTGCAGATCTTCTGCCGGA‑TTGTACGACGTTTGTAATATCACGTCGAAACCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATgg > 1:617029/1‑244 (MQ=255) tttgttaatttttTCTTTCGTATTTTTGCAGTTCTTCTGCGGGT‑TTTGGCGTCGTTTGAAATACCAC‑TTAAAACCTTTCTTCTTCA‑TTTTGG‑GGGGGAAGGGAATGCAAACCTACAGAGAAAAACGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAacac < 2:787501/241‑1 (MQ=255) ttatttttGCTTTCGCTTTTTTGCAGATCTTCTGCCGGT‑TTGTGGTACGTTTGTAATATCACGTCGAAACCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGAAAAACTTAAGAAAAAAACGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACttttt < 1:534904/246‑1 (MQ=255) aaTTTTTCTTCCGCTTTTTTGCGGATCTTCTGC‑GGAGTTGTGCGTCGTTTGTAATATCACGTCAAAACCTC‑CTTCTCCACTTTTGG‑CGGTGA‑TGCCATAAAAAACTCCAAAGAAAAACGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGTTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTcg < 1:730516/250‑1 (MQ=255) aaTTTTGCTTTCGCATTTTTGCAGATCTTCTGCCGGA‑TTGTGCGACGTTTGTAATATCACGTCGAAACCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTcgc > 2:1087191/1‑251 (MQ=255) ttttGCTTTCGCATTTTTGCAGATTTTCTGCCGGT‑TTGTGCGCCGTTTGAAATATCACGTCAAACCCTT‑CTTCTCCGGTTTTGG‑GGGTGA‑TGGCATACAAAATTAAAGAAAAAAACGTATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTcgcg < 2:1145235/250‑1 (MQ=255) tctttcctttttttgacgATCTTTTGCCGGT‑TTGGGCGGCGTTTAAAATACCCCGTCAAACCCTT‑CTTCTTCAGCTTGGG‑GGTTGA‑GGGCATGAAAAACTAAAAAAAAAAACGTTTTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCt < 2:1075354/233‑1 (MQ=255) cTTTCGCCTTATTGCAGATCTTCTGCCGGA‑TCGTGCGACGTTTGTACTATCACGTGGAAACCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCAGAGAAAAACGGATTACCCGCCGTGGATTTGGTCGAAAGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGAGGGCCAGCCTGTTTGGCTGATCCTGTAATTCTTCCAAGGCCCTTCACACCTTTTCGCGCGCttt > 2:425184/1‑250 (MQ=255) tttCGCATTTTTGCAGATCTTCTGCCGGA‑TTGTGCGACGTTTGTAATATCACGTCGAAACCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTcc > 2:71301/1‑251 (MQ=255) ttcttttttttGCAGATCTGCTCCCGGT‑TTGTGCGCCTTTTGAAATACCACGCCGAACCCTT‑CTTCTCCA‑CTTTGGGCGGTGA‑GGACATACAAACCCTCAAAGAAAACCGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTcc < 1:411667/244‑1 (MQ=255) ttCGCATTTTTGAAGATCTTCTGCCGGA‑TTGTGCGACGTTTGTAATATCACGTCGAAACCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTAAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTTGCTGCTACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCg > 2:1069143/1‑251 (MQ=255) ggtgttctcttccgATCTTCTGCGGGA‑TTGTGCGACGTTTGTAATACCACGTCGAACCCTT‑CTTCTTCAGCTTTGG‑GGGTGA‑GGGCATGAAAACCTTCAGAAAAAAACGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCgg < 1:365824/238‑1 (MQ=255) tttGCAGATCTTCTGCCGGA‑TTGTGCGACGTTTGTAATATCACGTCGAAACCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGat > 1:573224/1‑250 (MQ=255) aGATCTTCTGACGGA‑TTGTGCGACGTTTGTAATATCACGTCGAAACCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGt > 1:509060/1‑251 (MQ=255) tctGCCGGA‑TTGTGCGACGTTTGTAATATCACGTCGAAACCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCgg > 2:365824/1‑233 (MQ=255) cGGA‑TTGTGCGACGTTTGTAATATCACGTCGAAACCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATAACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGATTGCTTATTc > 2:1116994/1‑250 (MQ=255) ggA‑TTGTGCGACGTTTGTAATATCACGTCGAAACCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAAAACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTc > 2:1076465/1‑249 (MQ=255) ttcgacgaTTGTAATATCCCGTCGAAACCTT‑CTTCTGCAGCTTTGG‑CGGAAC‑TGGCATGCAAAAATTCAAAGAAAAACGGATTACCCGCCGTAGGTTTGGTCGAACGGGTAGAAATCACCATAATGGCAACAAAACCCGAAGAGGTCCGCGCGCGGGCCAGCCTGTTTGGCTGATACTATAATTATTCAATGGCCCGTCACCCTTTTTCGCGGGCTTCCGGGGAGATATTCGTTTGCTTATTCATCAcgcg > 2:975829/3‑251 (MQ=255) aCGTTTGTAATATCACGTCGAAACCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGAt > 2:639095/1‑251 (MQ=255) ttGTAATATCACGTCGAAACCTT‑CTTCTTCAGCTTTGG‑CGGCGC‑TGGCATGCAAAACTTCAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCCTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACgg > 1:425243/1‑251 (MQ=255) gTAAGATCACGACTAACCCTT‑CTCCTTCATCTTTGG‑CGGTGT‑GGGCAGGCAACCTTTCAAAAAAAAACGAATCCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTAGTCAGCACGCGTGATACGGt < 2:422546/250‑1 (MQ=255) atCACGTCGAAACCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCAGAGAAAAACGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGAttt < 1:594015/251‑1 (MQ=255) aaCCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCt > 1:1062080/1‑251 (MQ=255) ttcttcAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAcccc > 1:1125143/1‑251 (MQ=255) cagtttggggggggA‑TGGCATGAAAAACTTCAAAAAAAAACGTATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCa < 1:290915/238‑1 (MQ=255) tttGG‑CGGTGA‑TGGCATGCAAAACTTCAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAatat > 1:730784/1‑251 (MQ=255) ggA‑TGGCATGAAAAATTTCAGAAAAAAACGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAAta < 1:1076465/250‑1 (MQ=255) cATGCAAAACTTCAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAggg > 1:122804/1‑251 (MQ=255) aaaCTTCAGAGAAAAACGGATTACCCGCAGTAGTTTTGGTCGAACGGGTAGAAATAAACATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATAAGCCTGCAACCCTGGCCATATAATAAATAGCAGGGGAcgt > 2:234959/1‑248 (MQ=255) | CGACAGAATAAACATGGGCATATTGACCTTCAACTTTGCCAATCACCACCACCGGAATATCATATTTATCGAGTTGGGCAAAAAATGACTCATCC‑GCTGGCGAACTGAGCATAATAATGCCTTTAATCATTTTCTGCTTAATTTTGCTTTCGCATTTTTGCAGATCTTCTGCCGGA‑TTGTGCGACGTTTGTAATATCACGTCGAAACCTT‑CTTCTTCAGCTTTGG‑CGGTGA‑TGGCATGCAAAACTTCAGAGAAAAACGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTTGTTTGGCTGATACTGTAATTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACAT > NC_000913/1383472‑1383961 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |