Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,466,540 9636 bp→ACCC intS[ypdJ] 15 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2466540 2476175 9636 58 [0] [0] 58 intS–[ypdJ] intS,yfdG,yfdH,yfdI,yodE,yfdK,yfdM,yfdN,yfdO,yfdP,yfdQ,yfdR,yfdS,[yfdT],[ypdJ]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 24665390 (0.000)56 (0.370)
+ACCC
51/480 1.0 100% intergenic (+156/‑6) argW/intS tRNA‑Arg/prophage CPS‑53 integrase
?NC_000913 2476176 = 0 (0.000)coding (304/306 nt)
coding (83/141 nt)
yfdT
ypdJ
protein YfdT
putative uncharacterized protein YpdJ

CTAGAGGTTCGAGACGATATTGAGCGCCGTGCTTATGAAATCGCACTCGTATCTCTGGAAGTAGAGCCAGATGAACGCGAAGCCTATGAATTATTCATGGAAAAGCGTTTCGGTGACTTAGTAGATCGTCGGAGAGCAAAAAACGGCGATAACGAATACATGGCATGGGATATGACTCTCGGTTGGATCATCTGGCAGCAACGAGCTGGTATCCATTTTTCAACAATGTCACAACAAGAGGTGAAATAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTAAAACCTTCATCTATGACCGGATTAAGTCAGGCGAC  >  NC_000913/2475930‑2476414
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                              
catgccgcattgtcctcttagttaaatggatataacgagcccctcctaagggctaattgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAAt                                                                                                                                                                                                                                             >  1:19244‑M2/247‑250 (MQ=255)
   gccgcattgtcctcttagttaaatggatataacgagcccctcctaagggctaattgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATag                                                                                                                                                                                                                                           >  2:1086214‑M2/244‑249 (MQ=255)
           gtcctcttagttaaatggatataacgagcccctcctaagggctaattgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACa                                                                                                                                                                                                                                  <  2:426138‑M2/15‑1 (MQ=255)
                        aatggatataacgagcccctcctaagggctaattgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGAt                                                                                                                                                                                                                    <  1:923649‑M2/29‑1 (MQ=255)
                           ggatataacgagcccctcctaagggctaattgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcattgttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAg                                                                                                                                                                                                                 <  1:1086214‑M2/32‑1 (MQ=255)
                           ggatataacgagcccctcctaagggctaattgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATg                                                                                                                                                                                                                   >  2:138568‑M2/220‑249 (MQ=255)
                           ggatataacgagcccctcctaagggctaattgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatagcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAg                                                                                                                                                                                                                 <  1:572792‑M2/32‑1 (MQ=255)
                            gatataacgagcccctcctaagggctaattgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAgg                                                                                                                                                                                                                >  2:91364‑M2/219‑251 (MQ=255)
                                   cgagcccctcctaagggctaattgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcacaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttccccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGtcc                                                                                                                                                                                                         >  2:546388‑M2/212‑250 (MQ=255)
                                   cgagcccctcctaagggctaattgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTc                                                                                                                                                                                                          >  2:1069671‑M2/212‑250 (MQ=255)
                                    gagcccctcctaagggctaattgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTc                                                                                                                                                                                                          >  2:627816‑M2/211‑249 (MQ=255)
                                                      aattgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCTGTTTCTTAAAATATCCTg                                                                                                                                                                                       >  2:191452‑M2/193‑250 (MQ=255)
                                                       attgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGAt                                                                                                                                                                                     <  1:718573‑M2/60‑1 (MQ=255)
                                                              gttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTc                                                                                                                                                                                                                       <  2:187189‑M2/26‑1 (MQ=255)
                                                              gttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTc                                                                                                                                                                                                                       >  1:187189‑M2/185‑210 (MQ=255)
                                                                      cctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCa                                                                                                                                                                      <  1:390960‑M2/75‑1 (MQ=255)
                                                                                 caccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagctcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGATCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTAtt                                                                                                                                                           <  1:1069671‑M2/86‑1 (MQ=255)
                                                                                  accatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTAttt                                                                                                                                                          <  1:105614‑M2/87‑1 (MQ=255)
                                                                                        tatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTttatt                                                                                                                                                     >  1:452476‑M2/159‑250 (MQ=255)
                                                                                           cagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCt                                                                                                                                                 <  2:19244‑M2/96‑1 (MQ=255)
                                                                                                             accagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCAGCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTc                                                                                                                               <  1:1019933‑M2/114‑1 (MQ=255)
                                                                                                              acaagccgcaaaatcccctgaatatcaagcattccgtagatttagagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTAGTACCTGATTTGCAGGTTCGATTcc                                                                                                                              <  2:156116‑M2/115‑1 (MQ=255)
                                                                                                                 gtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCt                                                                                                                            >  1:133011‑M2/134‑250 (MQ=255)
                                                                                                                  tccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTAt                                                                                                                          >  2:1158469‑M2/133‑251 (MQ=255)
                                                                                                                   ccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTAtt                                                                                                                         >  1:311285‑M2/132‑251 (MQ=255)
                                                                                                                    cgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTc                                                                                                                        <  1:1158469‑M2/121‑1 (MQ=255)
                                                                                                                         aatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGgaga                                                                                                                   <  1:1026894‑M2/126‑1 (MQ=255)
                                                                                                                             ccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGc                                                                                                               <  1:33018‑M2/130‑1 (MQ=255)
                                                                                                                                 gaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCAc                                                                                                             <  1:305848‑M2/132‑1 (MQ=255)
                                                                                                                                 gaatatcaagaattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTc                                                                                                           >  1:1144722‑M2/118‑251 (MQ=255)
                                                                                                                                        aagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAac                                                                                                    <  1:119644‑M2/141‑1 (MQ=255)
                                                                                                                                          gcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAacac                                                                                                  <  1:930262‑M2/143‑1 (MQ=255)
                                                                                                                                                                  catggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGtt                                                                          >  1:1071551‑M2/85‑251 (MQ=255)
                                                                                                                                                                  catggttcgcttcagatcgttgacagccgcactacattacgggtaaaaagtggataaaataattttacccaccggatagtacccTAATAGAGCCATAAAGCCTCACACACGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTGACTGGtt                                                                          >  1:849216‑M2/85‑251 (MQ=255)
                                                                                                                                                                   atggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTg                                                                         <  1:91364‑M2/168‑1 (MQ=255)
                                                                                                                                                                          gcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGa                                                                   >  1:342470‑M2/77‑250 (MQ=255)
                                                                                                                                                                                   cgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTcatcat                                                         <  2:342470‑M2/184‑1 (MQ=255)
                                                                                                                                                                                       gacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCt                                                     >  1:594303‑M2/64‑251 (MQ=255)
                                                                                                                                                                                         cagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGa                                                   <  2:594303‑M2/190‑1 (MQ=255)
                                                                                                                                                                                          agccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattgtacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTCCCTGATTTGCAGGTTCGATTCCCTATTCGGAGATATCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGAt                                                  <  2:56507‑M2/191‑1 (MQ=255)
                                                                                                                                                                                             cgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACt                                               <  2:490454‑M2/194‑1 (MQ=255)
                                                                                                                                                                                                        acgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTaa                                    <  2:452476‑M2/205‑1 (MQ=255)
                                                                                                                                                                                                          gggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTaaa                                   >  1:98527‑M2/45‑250 (MQ=255)
                                                                                                                                                                                                              aaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTAAAACCt                               <  1:138568‑M2/210‑1 (MQ=255)
                                                                                                                                                                                                               aaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTAAAACCTTc                             >  1:200150‑M2/40‑251 (MQ=255)
                                                                                                                                                                                                                     ggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTAAAACCTTCATCTAt                       >  2:680248‑M2/34‑251 (MQ=255)
                                                                                                                                                                                                                          aaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGCTTTGAAATTCATCATGGCTGATACTGGCTTTGGTAAAACCTTCATCTATGACCg                  >  2:864458‑M2/29‑251 (MQ=255)
                                                                                                                                                                                                                          aaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTAAAACCTTCATCTATGACCg                  >  2:256646‑M2/29‑251 (MQ=255)
                                                                                                                                                                                                                              aattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTAAAACCTTCATCTATGACCGGAtt              <  2:133011‑M2/227‑1 (MQ=255)
                                                                                                                                                                                                                                     cccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGGGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTAAAACCTTCATCTATGACCGGATTAAGTc         >  2:688200‑M2/18‑249 (MQ=255)
                                                                                                                                                                                                                                     cccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTAAAACCTTCATc                          <  2:572664‑M2/215‑1 (MQ=255)
                                                                                                                                                                                                                                     cccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTAAAACCTTCATc                          >  1:572664‑M2/18‑232 (MQ=255)
                                                                                                                                                                                                                                     cccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTAAAACCTTCATCTATGACCGGATTAAGTCAg       <  1:996321‑M2/234‑1 (MQ=255)
                                                                                                                                                                                                                                        accggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCa                                                                                                      >  2:474812‑M2/15‑153 (MQ=255)
                                                                                                                                                                                                                                        accggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCa                                                                                                      <  1:474812‑M2/139‑1 (MQ=255)
                                                                                                                                                                                                                                          cggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTAAAACCTTCATCTATGACCGGATTAAGTCAGGCGAc  <  2:1071551‑M2/239‑1 (MQ=255)
                                                                                                                                                                                                                                                     cTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGc                                            <  2:1085580‑M2/197‑1 (MQ=255)
                                                                                                                                                                                                                                                     cTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGc                                            >  1:1085580‑M2/2‑198 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                              
CTAGAGGTTCGAGACGATATTGAGCGCCGTGCTTATGAAATCGCACTCGTATCTCTGGAAGTAGAGCCAGATGAACGCGAAGCCTATGAATTATTCATGGAAAAGCGTTTCGGTGACTTAGTAGATCGTCGGAGAGCAAAAAACGGCGATAACGAATACATGGCATGGGATATGACTCTCGGTTGGATCATCTGGCAGCAACGAGCTGGTATCCATTTTTCAACAATGTCACAACAAGAGGTGAAATAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTAAAACCTTCATCTATGACCGGATTAAGTCAGGCGAC  >  NC_000913/2475930‑2476414

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: