Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,556,2070TC31.7% 76.2 / 12.0 41S215G (AGT→GGT) rtcARNA 3'‑terminal phosphate cyclase
Reads supporting (aligned to +/- strand):  ref base T (26/2);  new base C (0/13);  total (26/15)
Fisher's exact test for biased strand distribution p-value = 5.96e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

GGTAGCACCAGTTGGTCAGCAAGATATTCCCCCACCGCCGCCGTGCTTGCCAGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGC  >  NC_000913/3555978‑3556456
                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                           
ggTAGCACCAGTTGGTCAGCAAGATATTCCCCCACCGCCGCCGTGCTTGCCAGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTc                                                                                                                                                                                                                                       >  2:421397/1‑251 (MQ=255)
       ccatttGGTCAGCAAGATATTCCCCCCCCCCCGCCGTTCTTGCCGGGTAGCTTTCCACCTCTTCCACCAACGGTGCCGCACCCCCCTCGGCCCTGACGCGCTTTTCCCCGACGAAAAAAAAGCGTTGGGTGATTTTTTCTCTTTCGACTAAAAGCGAGACGGTATTCCCCGGCCCCTGGTCGCGCGGCAGTTTATGAAT‑ATTCTTTTCATGCAGGAAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCa                                                                                                                                                                                                                                <  1:377857/247‑1 (MQ=255)
        cAGTTGGTCAGCAAGATATTCCCCCACCGCCGCCGTGCTTGCCAGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTc                                                                                                                                                                                                                                 >  1:130292/1‑249 (MQ=255)
             ggacaacaatatttcccccccccccCGCCGTGCTTGCCGGGTAGCGTTCCCCCTCTTCCCCCACCGGGCCCGCACCCCCCCCGGCACTGACGCTCTTTCCCCCGACGACAAAAAGGCGTTGGGTATTATTTCCCCTTTCGACTCAAAGCGAGACGGTTTCCCCCGGCCCCTGGTCGGGCGGGAGGTTATGAAT‑ATTTTGTTCAGGAAGGAAAAACCCCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACa                                                                                                                                                                                                                          <  2:135871/236‑1 (MQ=255)
               acAGCAAGATTTCCCCCCCCCCCCCCCGCGCTTGCCAGGTGGCGTTTCCCCTCTTCCCCCAACTGTGCCGCAACCCCCTCGGCCCTGACGCTTTTTCCACCGACAAAAAAAAAGCGTTGGGTGATTTTTTCTCTTTCGACTACAGGCGAGACGGTATTCCCCGGCCCCTGGCCGCGCGGCGGTTTATGAAT‑ATTCTGTTCATGCAGGAAAAAACCCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATg                                                                                                                                                                                                                        <  1:437817/250‑1 (MQ=255)
                       atatTCCCCCACCGCCGCCGTGCTTGCCAGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑c                                                                                                                                                                                                                >  1:416946/1‑250 (MQ=255)
                        tatcccccccccccCGCCGTGCTTGCCGGGTAGCTTTCCCCCTCTTCCCCCAACTGGCCCGCACCCCCCTCGGCACTGACGCGCTTTCCCCCGACGAAAAAAAAGCGTTGGGTGATATTTTCATTTTCGACTCAAAGCGAGACGGTATTCCCCGCCCCCTGGGCGCGGGGCAGTTTATGAAT‑TTTCTGTTCATGCAGGAAAAACCCCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑ca                                                                                                                                                                                                               <  1:237691/246‑1 (MQ=255)
                                     ccgccgTGCTGGCCAGGTCGCGTTTCCCCTCTCCCCCCAACGGTGCCGCACCCCCCTCGGCCGTGACGCTCGTTACCCCGACGAAAAAAAAGCGTTCGGTAATTTTTTCACTTCCGCCTACAAGCGAGACGGTATTCCCCGGCCCCGGGTCGCGCGGCAGGTTAGGAAT‑ATCCTTTTCATGCAGGGAAAACCCCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGa                                                                                                                                                                                                 <  2:98007/251‑1 (MQ=255)
                                       gccgTGCTTGCCAGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAAc                                                                                                                                                                                               >  2:370055/1‑251 (MQ=255)
                                         cgTGCTTGCCAGGCAGCGTTTCACCTCTTTCACCAACTGTGACGCAACCACCTAGGCACTGACGCGCTTTTCACCGACGACAAAACAGCGTTCGGTGAAACTTTCACTTTCGACTACACGCGAGACGGTAGTACCCGGCACCTGGTCGCGAGGCCGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTGTACGCTCAGCAACCTGGCGCGGTCCCAC‑AGCTAATAgcattt                                                                                                                                                                                             >  2:116791/1‑246 (MQ=255)
                                                 ccAGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCAACTCGGCACTGACGCGCTTTTCACCGCCGACAAAAAAGCGTTCGGCGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑CTTCTGTTCATGCAGGGAAAAACTCGCC‑GCCAGTGGAGCGACTTCACGCTCAGCAACACGGCGCGG‑CACACCAGATAAATGAACTTCTCTACGc                                                                                                                                                                                     >  2:295918/1‑251 (MQ=255)
                                                       aGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGc                                                                                                                                                                               >  2:60544/1‑251 (MQ=255)
                                                           tttCCCCTCTTCCCCCACCTGTCCCGCACCCCCCGCGGCACTGCCGCGCTTTTCCCCAACGACAAAAAAGCGTTCGGTAATATTTTCACTTTCGCCTACAAGCGAGGCGTTATTCCCCGCCCCCTGGTCGCGCGGCAGGTTATAAAT‑ATTCTGTTCAGGCAGGAAAAACCCCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGcac                                                                                                                                                                             <  1:427330/249‑1 (MQ=255)
                                                                       cACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCgcgcc                                                                                                                                                               >  2:179857/1‑250 (MQ=255)
                                                                          cAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGc                                                                                                                                                            >  2:421024/1‑251 (MQ=255)
                                                                                                            ttttCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCACGTTGCAAGGTGTTAAACGATGCCACGGGCg                                                                                                                           >  2:22240/1‑250 (MQ=255)
                                                                                                                          aaaaaaGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGcc                                                                                                             >  1:54530/1‑250 (MQ=255)
                                                                                                                                gtgtttggtaatttttccccttccGACTTAAGGCGAGACGTTATCCCCCGCCCCCTGGGCGGGGGGCATGTTATGAAT‑TTTCTGTTCATGCAGGAAAAACCCCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCacac                                                                                                      <  2:395054/228‑1 (MQ=255)
                                                                                                                                           tatTTTCACTTTCGACTTCACGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGc                                                                                            >  2:198432/1‑250 (MQ=255)
                                                                                                                                             ttttCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAgg                                                                                         >  2:6147/1‑251 (MQ=255)
                                                                                                                                              tttCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAggg                                                                                        >  1:207499/1‑251 (MQ=255)
                                                                                                                                              tttCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCCGCAggg                                                                                        >  1:232291/1‑251 (MQ=255)
                                                                                                                                                  aCTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTaa                                                                                     >  1:36118/1‑250 (MQ=255)
                                                                                                                                                   cTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTaaa                                                                                    >  1:161495/1‑250 (MQ=255)
                                                                                                                                                              aagcgagagggtgtcccccGCCCCTTGGTCGCGCGG‑GGGTTTAGAATTATTCTGTCCATGCAGGAAAAACCCCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTa                                                                        <  1:421397/235‑1 (MQ=255)
                                                                                                                                                              aaGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCCGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑cac                                                                                                                                                                                                              >  1:338386/1‑117 (MQ=255)
                                                                                                                                                              aaGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGt                                                                         >  1:403456/1‑250 (MQ=255)
                                                                                                                                                                       ggTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGGGGCGTAACAGCGTgg                                                               >  2:228590/1‑251 (MQ=255)
                                                                                                                                                                           tcaCCCGGCCCGTGGCCGCGCGGCAGTTTATGAAT‑ATTCTGTTCATGCAGGAAAAACCCCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGttt                                                            <  1:40261/248‑1 (MQ=255)
                                                                                                                                                                            cccccGGCCCCGGGTCGCGGGGCGGGTTATGAAT‑ATTCTGTTCATGC‑GGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGc                                                          <  1:36401/249‑1 (MQ=255)
                                                                                                                                                                             ccccGCCCCCTGGCCGCGCGGATGGTTAGAAAT‑ATTCTGTTGACGCAGGAAAAAACCCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCt                                                         <  1:410440/250‑1 (MQ=255)
                                                                                                                                                                              cccGGCCCCGGGGCGCGGGGCAGTTTAGAAAT‑ATTCTTTACAGGCAGGAAAAACCCCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCtg                                                        <  1:22240/251‑1 (MQ=255)
                                                                                                                                                                                             cgcgGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTAtttt                                         >  1:388417/1‑251 (MQ=255)
                                                                                                                                                                                                      ttATGAAG‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGACCTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGAAGCCACGGGCGAGACGTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTTGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCcagc                                  >  2:341034/1‑249 (MQ=255)
                                                                                                                                                                                                       tATGAAT‑TTTCTGTTCATGGAGGAAAAACCTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCcagcag                                <  1:370055/250‑1 (MQ=255)
                                                                                                                                                                                                       tATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCagcagc                               >  1:99515/1‑251 (MQ=255)
                                                                                                                                                                                                          agatgctccTGTTCATGAAGGGAAAACCCCCCC‑GCCAGTGTAGCGATTGCACGCTCAGCAACATGCCGCTG‑CACACCAGCTAATAGAACTCCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATGCCTATTTTCGCCAGCAGCgg                             <  2:205964/243‑1 (MQ=255)
                                                                                                                                                                                                            at‑atTCTTTCCAGGCAGGAAAAACCCCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTc                          <  1:60544/251‑1 (MQ=255)
                                                                                                                                                                                                                 tCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGc                      >  1:46453/1‑251 (MQ=255)
                                                                                                                                                                                                                                    aCTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCg   >  2:219971/1‑251 (MQ=255)
                                                                                                                                                                                                                                     cTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGc  >  2:401580/1‑251 (MQ=255)
                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                           
GGTAGCACCAGTTGGTCAGCAAGATATTCCCCCACCGCCGCCGTGCTTGCCAGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGC  >  NC_000913/3555978‑3556456

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑