Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,556,2000GA29.3% 66.7 / 12.7 41S217F (TCC→TTC) rtcARNA 3'‑terminal phosphate cyclase
Reads supporting (aligned to +/- strand):  ref base G (24/5);  new base A (0/12);  total (24/17)
Fisher's exact test for biased strand distribution p-value = 7.83e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

AAATTCCCCCGCGCCCGCCAGCGCCATCGGTAGCACCAGTTGGTCAGCAAGATATTCCCCCACCGCCGCCGTGCTTGCCAGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGC  >  NC_000913/3555950‑3556436
                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                              
aaaTTCCCCCGCGCCCGCCAGCGCCATCGGTAGCACCAGTTGGTCAGCAAGATATTCCCCCACCGCCGCCGTGCTTGCCAGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAggg                                                                                                                                                                                                                                                >  1:395054/1‑251 (MQ=255)
 aaTTCCCCCTCGCCCGCCATCGCCATCGGTAGCACCAGTTGGTCAGCAAGATATTCCCCCACCGCCGCCGTGCTTGCCAGGTAGCGTTTCACCTCTTTCTCCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGGCTCTGGTCGCGCGGCAGGTGATGAAG‑ATGCTTTTCATGCAGGGa                                                                                                                                                                                                                                               <  2:330766/251‑1 (MQ=255)
     cccccGCGCCCGCCAGCGCCATCGGTAGCACCAGTTGGTCAGCAAGATATTCCCCCACCGCCGCCGTGCTTGCCAGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGaaaaa                                                                                                                                                                                                                                           <  1:35532/251‑1 (MQ=255)
                            ggTAGCACCAGTTGGTCAGCAAGATATTCCCCCACCGCCGCCGTGCTTGCCAGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTc                                                                                                                                                                                                                   >  2:421397/1‑251 (MQ=255)
                                   ccatttGGTCAGCAAGATATTCCCCCCCCCCCGCCGTTCTTGCCGGGTAGCTTTCCACCTCTTCCACCAACGGTGCCGCACCCCCCTCGGCCCTGACGCGCTTTTCCCCGACGAAAAAAAAGCGTTGGGTGATTTTTTCTCTTTCGACTAAAAGCGAGACGGTATTCCCCGGCCCCTGGTCGCGCGGCAGTTTATGAAT‑ATTCTTTTCATGCAGGAAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCa                                                                                                                                                                                                            <  1:377857/247‑1 (MQ=255)
                                    cAGTTGGTCAGCAAGATATTCCCCCACCGCCGCCGTGCTTGCCAGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTc                                                                                                                                                                                                             >  1:130292/1‑249 (MQ=255)
                                         ggacaacaatatttcccccccccccCGCCGTGCTTGCCGGGTAGCGTTCCCCCTCTTCCCCCACCGGGCCCGCACCCCCCCCGGCACTGACGCTCTTTCCCCCGACGACAAAAAGGCGTTGGGTATTATTTCCCCTTTCGACTCAAAGCGAGACGGTTTCCCCCGGCCCCTGGTCGGGCGGGAGGTTATGAAT‑ATTTTGTTCAGGAAGGAAAAACCCCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACa                                                                                                                                                                                                      <  2:135871/236‑1 (MQ=255)
                                           acAGCAAGATTTCCCCCCCCCCCCCCCGCGCTTGCCAGGTGGCGTTTCCCCTCTTCCCCCAACTGTGCCGCAACCCCCTCGGCCCTGACGCTTTTTCCACCGACAAAAAAAAAGCGTTGGGTGATTTTTTCTCTTTCGACTACAGGCGAGACGGTATTCCCCGGCCCCTGGCCGCGCGGCGGTTTATGAAT‑ATTCTGTTCATGCAGGAAAAAACCCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATg                                                                                                                                                                                                    <  1:437817/250‑1 (MQ=255)
                                                   atatTCCCCCACCGCCGCCGTGCTTGCCAGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑c                                                                                                                                                                                            >  1:416946/1‑250 (MQ=255)
                                                    tatcccccccccccCGCCGTGCTTGCCGGGTAGCTTTCCCCCTCTTCCCCCAACTGGCCCGCACCCCCCTCGGCACTGACGCGCTTTCCCCCGACGAAAAAAAAGCGTTGGGTGATATTTTCATTTTCGACTCAAAGCGAGACGGTATTCCCCGCCCCCTGGGCGCGGGGCAGTTTATGAAT‑TTTCTGTTCATGCAGGAAAAACCCCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑ca                                                                                                                                                                                           <  1:237691/246‑1 (MQ=255)
                                                                 ccgccgTGCTGGCCAGGTCGCGTTTCCCCTCTCCCCCCAACGGTGCCGCACCCCCCTCGGCCGTGACGCTCGTTACCCCGACGAAAAAAAAGCGTTCGGTAATTTTTTCACTTCCGCCTACAAGCGAGACGGTATTCCCCGGCCCCGGGTCGCGCGGCAGGTTAGGAAT‑ATCCTTTTCATGCAGGGAAAACCCCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGa                                                                                                                                                                             <  2:98007/251‑1 (MQ=255)
                                                                   gccgTGCTTGCCAGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAAc                                                                                                                                                                           >  2:370055/1‑251 (MQ=255)
                                                                     cgTGCTTGCCAGGCAGCGTTTCACCTCTTTCACCAACTGTGACGCAACCACCTAGGCACTGACGCGCTTTTCACCGACGACAAAACAGCGTTCGGTGAAACTTTCACTTTCGACTACACGCGAGACGGTAGTACCCGGCACCTGGTCGCGAGGCCGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTGTACGCTCAGCAACCTGGCGCGGTCCCAC‑AGCTAATAgcattt                                                                                                                                                                         >  2:116791/1‑246 (MQ=255)
                                                                             ccAGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCAACTCGGCACTGACGCGCTTTTCACCGCCGACAAAAAAGCGTTCGGCGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑CTTCTGTTCATGCAGGGAAAAACTCGCC‑GCCAGTGGAGCGACTTCACGCTCAGCAACACGGCGCGG‑CACACCAGATAAATGAACTTCTCTACGc                                                                                                                                                                 >  2:295918/1‑251 (MQ=255)
                                                                                   aGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGc                                                                                                                                                           >  2:60544/1‑251 (MQ=255)
                                                                                       tttCCCCTCTTCCCCCACCTGTCCCGCACCCCCCGCGGCACTGCCGCGCTTTTCCCCAACGACAAAAAAGCGTTCGGTAATATTTTCACTTTCGCCTACAAGCGAGGCGTTATTCCCCGCCCCCTGGTCGCGCGGCAGGTTATAAAT‑ATTCTGTTCAGGCAGGAAAAACCCCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGcac                                                                                                                                                         <  1:427330/249‑1 (MQ=255)
                                                                                                   cACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCgcgcc                                                                                                                                           >  2:179857/1‑250 (MQ=255)
                                                                                                      cAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGc                                                                                                                                        >  2:421024/1‑251 (MQ=255)
                                                                                                                                        ttttCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCACGTTGCAAGGTGTTAAACGATGCCACGGGCg                                                                                                       >  2:22240/1‑250 (MQ=255)
                                                                                                                                                      aaaaaaGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGcc                                                                                         >  1:54530/1‑250 (MQ=255)
                                                                                                                                                            gtgtttggtaatttttccccttccGACTTAAGGCGAGACGTTATCCCCCGCCCCCTGGGCGGGGGGCATGTTATGAAT‑TTTCTGTTCATGCAGGAAAAACCCCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCacac                                                                                  <  2:395054/228‑1 (MQ=255)
                                                                                                                                                                       tatTTTCACTTTCGACTTCACGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGc                                                                        >  2:198432/1‑250 (MQ=255)
                                                                                                                                                                         ttttCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAgg                                                                     >  2:6147/1‑251 (MQ=255)
                                                                                                                                                                          tttCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAggg                                                                    >  1:207499/1‑251 (MQ=255)
                                                                                                                                                                          tttCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCCGCAggg                                                                    >  1:232291/1‑251 (MQ=255)
                                                                                                                                                                              aCTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTaa                                                                 >  1:36118/1‑250 (MQ=255)
                                                                                                                                                                               cTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTaaa                                                                >  1:161495/1‑250 (MQ=255)
                                                                                                                                                                                          aagcgagagggtgtcccccGCCCCTTGGTCGCGCGG‑GGGTTTAGAATTATTCTGTCCATGCAGGAAAAACCCCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTa                                                    <  1:421397/235‑1 (MQ=255)
                                                                                                                                                                                          aaGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCCGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑cac                                                                                                                                                                                          >  1:338386/1‑117 (MQ=255)
                                                                                                                                                                                          aaGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGt                                                     >  1:403456/1‑250 (MQ=255)
                                                                                                                                                                                                   ggTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGGGGCGTAACAGCGTgg                                           >  2:228590/1‑251 (MQ=255)
                                                                                                                                                                                                       tcaCCCGGCCCGTGGCCGCGCGGCAGTTTATGAAT‑ATTCTGTTCATGCAGGAAAAACCCCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGttt                                        <  1:40261/248‑1 (MQ=255)
                                                                                                                                                                                                        cccccGGCCCCGGGTCGCGGGGCGGGTTATGAAT‑ATTCTGTTCATGC‑GGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGc                                      <  1:36401/249‑1 (MQ=255)
                                                                                                                                                                                                         ccccGCCCCCTGGCCGCGCGGATGGTTAGAAAT‑ATTCTGTTGACGCAGGAAAAAACCCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCt                                     <  1:410440/250‑1 (MQ=255)
                                                                                                                                                                                                          cccGGCCCCGGGGCGCGGGGCAGTTTAGAAAT‑ATTCTTTACAGGCAGGAAAAACCCCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCtg                                    <  1:22240/251‑1 (MQ=255)
                                                                                                                                                                                                                         cgcgGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTAtttt                     >  1:388417/1‑251 (MQ=255)
                                                                                                                                                                                                                                  ttATGAAG‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGACCTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGAAGCCACGGGCGAGACGTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTTGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCcagc              >  2:341034/1‑249 (MQ=255)
                                                                                                                                                                                                                                   tATGAAT‑TTTCTGTTCATGGAGGAAAAACCTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCcagcag            <  1:370055/250‑1 (MQ=255)
                                                                                                                                                                                                                                   tATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCagcagc           >  1:99515/1‑251 (MQ=255)
                                                                                                                                                                                                                                      agatgctccTGTTCATGAAGGGAAAACCCCCCC‑GCCAGTGTAGCGATTGCACGCTCAGCAACATGCCGCTG‑CACACCAGCTAATAGAACTCCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATGCCTATTTTCGCCAGCAGCgg         <  2:205964/243‑1 (MQ=255)
                                                                                                                                                                                                                                        at‑atTCTTTCCAGGCAGGAAAAACCCCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTc      <  1:60544/251‑1 (MQ=255)
                                                                                                                                                                                                                                             tCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGc  >  1:46453/1‑251 (MQ=255)
                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                              
AAATTCCCCCGCGCCCGCCAGCGCCATCGGTAGCACCAGTTGGTCAGCAAGATATTCCCCCACCGCCGCCGTGCTTGCCAGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAAT‑ATTCTGTTCATGCAGGGAAAAACTCCCC‑GCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGG‑CACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGC  >  NC_000913/3555950‑3556436

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑