| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,177,748 | 0 | C | A | 32.5% | 56.1 / 11.5 | 41 | E55* (GAG→TAG) | nudF | ADP‑sugar pyrophosphatase |
| Reads supporting (aligned to +/- strand): ref base C (23/4); new base A (0/13); total (23/18) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.98e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GAAACTTAACACCGGTTTGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTC‑ACCC‑TCTTC‑AATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATGTGTT > NC_000913/3177521‑3177988 | gAAACTTAACACCGGTTTGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTC‑ACCC‑TCTTC‑AATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCC‑GCCGCACCTCAt > 1:212927/1‑251 (MQ=255) cacCGGTTTGGTCCGTTTGACTATCCGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTC‑CCCC‑TCTTC‑AATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCACTCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGAAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCC‑GCCGCACCTCACGACTCAttt > 1:148637/1‑251 (MQ=255) gTTTGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTC‑ACCC‑TCTTC‑AATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCg > 1:416283/1‑251 (MQ=255) tGGTCCGTTTGACTATCAGTCCCGCCTCTTCACTCGCTTCGCGACGGGCAACATCTTACACACTTTC‑ACCC‑TCTTC‑AATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTg > 1:382650/1‑251 (MQ=255) ttgtccaataagcccctcgtcataaaTCGCTTCGCGACGGGCAACATCTTCCCCA‑TTTCTCCCC‑CCTAC‑AATCATCCCGGAAACCATCCCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAACCCGAATTTGCCCAATAAGCACAACTCCACCCCGCACTGGGTCAAAGGGTAGCAAGCCTGCGGCTTTCCCCCCCAAAAAATTTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGa < 1:194374/226‑1 (MQ=255) tGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTC‑ACCC‑TCTTC‑AATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACg > 2:117310/1‑250 (MQ=255) accgcccccGCCTCTTCAATCGCTTCGCGACGGGCAACATCTCCCACCCTTTC‑CCCC‑TCTTC‑AACCACCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCGGGTGTCGTACGCGGCAATCCGAATCGGCTCAATCAGCACAACTTCACCACGCACGGGGTCAAGGGGTAGCAAGACTGGGGCGTGCCCGCGATAAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACg < 2:235406/245‑1 (MQ=255) ccccccGCCTCTCCAAGCGCACCGCGCCGGGCAACATCTTCCACACTTCC‑CCCC‑CCTCC‑AACCCCCCCGGCAACCATCTCCAGTAGC‑AAGGGGTTTTCGCGGGTGGCGTACGCGGCAATCCGAATCTGCCCAATCAGCAACACTCCATCCCGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTAAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGaaa < 2:217760/248‑1 (MQ=255) cctctcaaaccGCTTCGCGACGGGCAACATCTTCCACACTTCC‑ACCC‑TCTTC‑AATCACCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCAAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACGGCGGCGTGACCGCGCTAAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATaa < 1:97784/241‑1 (MQ=255) tgaaaccgctgcgcagcggccAACATCTCCCACCCTTTC‑CCCC‑GCTTC‑AATCACCCCGGCACCCATCTCCATTACCCAGGGGGTTT‑CGCTGGTGTCGTACGGGGCAATCCGACTCTGCTCAACCAGCACAACTTCATCTCGCAATGGGTCAAGGGGTACCAAGAGTGCTGCGTGACCGCGCTAAAAATTTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAg < 2:361071/229‑1 (MQ=255) gcgACGGGCAACATCTTCCACACTTTC‑ACCC‑TCTTC‑AATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGaaaaa > 1:414736/1‑250 (MQ=255) gggCAACTTCTTCCACACTTTC‑‑CCC‑CCTTCCAACCTCCCCGGCACCCAGCCCCAGTCGCCAAGGGGTTT‑CGCTGGTTTCGTACGCGGCAATCCGAATCTGCCCAATCAGCACAACTTAACCACGCACTGGTGAAAAGGGAAGCAAGACTGGGCCGTAACCGCACTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCcg < 1:297078/251‑1 (MQ=255) gccAACATCTTCCAC‑CTTTC‑CCCCCTCTCC‑AACCCCCCCGCCACCCATCCCCATTGGCCAGGGGGTTT‑CGCTGGTGTCGTCCGCGGCAATCCGAATCTCCTCAACCAGCACACCTTCACCCCGCACTGGTTCAAGGGGTAGCAAGCCTGCGGCGTGCCCGCCCTAAAAATTTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCcgc < 1:26258/249‑1 (MQ=255) cATCTCCCACACTTTC‑CCCC‑TCTTC‑AATCACCCCGGCACCCATCTCCAGTAGCCAGGGGGTTT‑CGCTGGTGTCGTACGCGGCAACCCGAATCTGCTCAATCAGCACAACTTCATCACGCACGGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTAAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATaa < 1:93546/251‑1 (MQ=255) aTCTTCCACACTTTC‑ACCC‑TCTTC‑AATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATaa > 1:239946/1‑250 (MQ=255) atcttcaacaagttcgccc‑TCTTC‑AATCATCACGGCACCCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGACGTACGCGGCAATCCTAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGGAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTGGAATAGGCGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATaa > 2:95128/17‑250 (MQ=255) cacccTTTC‑CCCC‑TCTTC‑AACCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAATCGGCTCAATCAGCACACCTTCACCACGCCCGGGGTAAAAGGGTAGCAAGCCTGCGGCGTGACCGCGCTAAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGttt < 1:231759/247‑1 (MQ=255) ccTTTC‑CCCC‑TCTTC‑AACCACCCCGGAACCCATCGCCAGTGCCCAGGGGGTTT‑CGCGGGTGTCGACCGGGGCAATCCGAATCTTCTCAATCAGCACAACTTCACCACGCACGGGGTCAAAGGTTAGAAAGACGGCGGGGTGACCGCGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTtctc < 1:451160/250‑1 (MQ=255) cTTTC‑ACCC‑TCTTC‑AATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCg > 2:344912/1‑251 (MQ=255) tC‑ACCC‑TCTTC‑AATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGCGTTTCTCGTGc > 2:394511/1‑251 (MQ=255) ccc‑TCTTC‑AATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTGT‑CGCTGGCGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCTTTGAATAGACGATGACGAAATCTATAAAGATCTCATGAACAAAAGCCGCGATCAATTTTTTCTCCTGCaat > 2:249256/1‑251 (MQ=255) tctTC‑AATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCaataat > 1:71760/1‑251 (MQ=255) cc‑AATCATCCCGGCAACCACCTCCAGTAGCCAGGGGGTTG‑CGCGGGTGTCGTACGCGGCAATCCGAATCTGCACAATCAGCACAACTTCATCACGCACGGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAAttt < 1:113258/249‑1 (MQ=255) aaTCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGGGGTTCTCGTGCAATAATTTCt > 1:1858/1‑250 (MQ=255) cGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGttt > 1:231957/1‑251 (MQ=255) aCCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGcc > 2:364787/1‑251 (MQ=255) tAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGTATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAACATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTCTAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGAAACgg > 2:24726/1‑251 (MQ=255) cAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGc > 1:178985/1‑249 (MQ=255) agggggTTG‑CGCTGGTGTCGTACGCGGCAACCCGATTCTGCTAAATCAGCACACCTTCACCACGCCCTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCCCT‑AAAAATTTCCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAgg < 2:212927/249‑1 (MQ=255) gtttcgtggttgtCGTACGCGGCAACCCGACTCTGCTAAAACACCACAACTCCACCACGCCCGGGGTCAAGGGGAAGCAAGCCTCGGGCGTGCCCGCGCTAAAAATTTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTc < 2:265767/241‑1 (MQ=255) gggaaaaccaaatcgtctcacccAGCCCAACTTCATCACGCACTGGTTAAAAGGGTACAAACACTGCGGCGTGCCCGCGCCCAAAAATTCCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAAt < 2:59623/229‑1 (MQ=255) cGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCAC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGc > 2:163493/1‑251 (MQ=255) cTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTa > 2:183619/1‑250 (MQ=255) gctaaaTCAGCACAACTTCAGCCCACTCGGGGACAAAGGGAACCAAGACTGCGGCGGGCCCGAGATAAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTGCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAAt < 2:447026/246‑1 (MQ=255) cTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGATCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAAtgtg > 2:448520/1‑250 (MQ=255) aaagggggaGCAAGACGGCGGCGTGCCCGCGCTAAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGAc < 1:344912/243‑1 (MQ=255) ggTAGCAAGACTGCGGCGTGCCCGCGCTAAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCg < 1:88687/251‑1 (MQ=255) ggTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCg > 2:296040/1‑251 (MQ=255) aaGACTGCGGCGTGACCGCGCTAAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAg < 1:212612/251‑1 (MQ=255) ggcgTGACCGCGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCAtg > 2:344229/1‑251 (MQ=255) tGACCGCGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATGTGtt > 2:288717/1‑251 (MQ=255) | GAAACTTAACACCGGTTTGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTC‑ACCC‑TCTTC‑AATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATGTGTT > NC_000913/3177521‑3177988 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |