| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,326,450 | 0 | T | G | 37.5% | 89.7 / 13.8 | 56 | G114G (GGT→GGG) | atoB | acetyl‑CoA acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (3/32); new base G (21/0); total (24/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.50e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
ACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGAGTTTAGCCCCCTACTTACT‑CGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACA‑GGTTTATGACGTAATCCTGCG‑CGATGGCCTGA‑TGTGCGCCACCCATGGTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTGAAATGCAGGATGAACTGGCGCTACATTCACAGCGTAAAGCGGCAGCCGCAATTGAGTCCGGTGCTTTTACA > NC_000913/2326202‑2326699 | aaaGTAATTAAAGCGGCCATTGAACGGGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGAGTTACACGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGGGCAGAGCATTGTGTCGCGGGGTAt < 2:42555/249‑1 (MQ=255) aGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATgg > 1:63176/1‑251 (MQ=255) ttAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGgaaa > 1:54007/1‑250 (MQ=255) tAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAat < 1:394268/250‑1 (MQ=255) tAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGGTGGaaaaa > 2:203369/1‑249 (MQ=255) aaaGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAata < 1:258101/250‑1 (MQ=255) gccATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGAGttt < 1:191054/251‑1 (MQ=255) cATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGGTGGAAAAAATGAGttt > 1:164523/1‑249 (MQ=255) gAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGAGTTTAGccc < 1:18472/250‑1 (MQ=255) gTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGAGGGGAAATATGGGTTTTGACCCCtac > 2:203371/1‑251 (MQ=255) gCAAAAATCGATTCACAACACGGTGATGAATTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGACATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGAGTTTAGCCCCCtact < 1:242715/250‑1 (MQ=255) aaaaaTCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGGTGGGAAATATGAGGTTAGccccccacctac > 1:146321/1‑244 (MQ=255) aTTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGAAAATCTGAGTTTAGCCCCCtcccttctcggtgcc > 1:363350/1‑237 (MQ=255) tCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGGTGGGAAAAATGAGGTTTGcccccacctttttcgattcca > 2:433459/1‑234 (MQ=255) cGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGAGTTTAGCCCCCTACTTACT‑CGATGCAAAAGCACGct < 2:17980/251‑1 (MQ=255) atgaAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGAGTTTAGCCCCCTACTTACT‑CGATGCAAAAGCACGCTCTGGt < 1:98901/251‑1 (MQ=255) tgaAGGGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAAACCGGCGCGTCAGGCACTGTTAAAGAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTAGGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCATGTCAGGCGCAGAGCATTGGGGTGGGGGGTATGGAAAATATGAGTTTAGCCCCCTACTTACT‑CGATGCAAAAGCACGCGCTGGt < 1:168632/250‑1 (MQ=255) gaAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTGTGGAAAATATGGGGTTAGCCCCCCACTTACT‑CCGTTCAAAAACACGCTCTgggtt > 2:112614/1‑248 (MQ=255) aGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGAGTTTAGCCCCCtacttact < 2:29368/225‑1 (MQ=255) aGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAAAATGGGTTTAGTCCCCTACTTACT‑CGATCTAAAAACACGCTCTGGttttc > 1:129806/1‑248 (MQ=255) aGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGGAAAAATTAGGTTTGCCCCCtacttact > 1:29368/1‑225 (MQ=255) ggATTATGGGTAACGTGTTACAAGACGGGCTGGGGCAAAAGCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAACCGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCCGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGAGTTTAGCCCCCTACTTACT‑CGATGCAAAAGCACGCTCTGGTTATCGt < 1:338044/250‑1 (MQ=255) aTTATGGGTAACGTGGTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGCGGTTCGGGTCGTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGTGGGGTATGGAAAATATGAGTTTAGCCCCCTACTTACT‑CGATGCAAAAGCACGCTCTGGTTATCGTCt < 1:340799/251‑1 (MQ=255) gTAACATGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGAGTTTAGCCCCCTACTTACT‑CGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGAc < 1:314386/251‑1 (MQ=255) aaCGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGAGTTTAGCCCCCTACTTACT‑CGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACgg < 1:96300/251‑1 (MQ=255) gCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGGAAATATGAGTTTAGCCCCCTACTTACT‑CGATGCAAAAACACGCTCTGGGTATCGTCTTGGAGACGGACA‑GGGTTATg > 1:214586/1‑250 (MQ=255) gggCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAGATATGAGTTTAGCCCCCTACTTACT‑CGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACA‑GGTTTATGACGTAATCCt < 1:61304/251‑1 (MQ=255) ggCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGAGTTTAGCCCCCTACTTACT‑CGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACA‑GGTTTATGACGTAATCCTg < 2:358305/251‑1 (MQ=255) aaaaTCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGTTGGGAAATATGGGGTTATCCACCTATTTACTTCTAT‑CAAAAAAACGCCCTGGTTATGCTCTTGGGGATGGACA‑GGTTTAttacagtatgctgcgc > 1:37771/1‑236 (MQ=255) aaaTCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGAGTTTAGCCCCCTACTTACT‑CGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACA‑GGTTTATGACGTAATCCTGcg‑cg < 1:392204/251‑1 (MQ=255) ggCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGAAGGAAAATATGAGTTTTGCCCCCTACTTACT‑CGATGCAAAAGCACGCTCTGGTTATTGTCTTTGAGACGGGCA‑GGTTTATGACGTAATCCTGCG‑CGATGGCCTGC‑tgtggg > 1:367119/1‑249 (MQ=255) gTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGGAAAAATGAGTTTTGGCCCCTACTTACT‑TGATGCAAAAACACGCTCTGGGTATCGTCTTGGAGACGGAAA‑GGGTTATGACGTAATCCTGCG‑CGATGGCCTGA‑TGTGCGCCAccc > 1:443169/1‑251 (MQ=255) aaaaaGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGCGGGGATGGGAAATATGAGTTTAGACCCCTACTTACT‑TGATGCAAAAACACGCTCTGGTTATCGTCTTGGGGGCGGGCA‑GGGTTATGACGTAATCCCTCG‑CGGTGGCCTGAATG‑GCGCCACCCa > 1:120418/1‑249 (MQ=255) aaaGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGAGTTTAGCCCCCTGCTTACT‑CGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACA‑GGTTTATGACGTAATCCTGCG‑CGATGGCCTGA‑TGTGCGCCACCCATGGt < 1:203369/251‑1 (MQ=255) cGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGAGTTTAGCCCCCTACTTACT‑CGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACA‑GGTTTATGACGTAATCCTGCG‑CGATGGCCTGA‑TGTGCGCCACCCATGGTTATCATATGGGGATTAcc < 1:82473/251‑1 (MQ=255) gtgCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGAAAATATGAGGTTAGCCCCCTACTTACT‑CGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACA‑GGGTTATGACGTAATCCTGCG‑CGATGGCCTGA‑TGTGCGCCACCCCTGGTTATCATATGGGGGTTAccgccg > 1:296344/1‑251 (MQ=255) ggATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGAGTTTAGCCCCCTACTTACT‑CGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACA‑GGTTTATGACGt < 1:421898/188‑1 (MQ=255) tCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGGAAAAATGAGGTTAACCCCCCACTTACT‑CGATGCAAAAGCACGCTCTGGTTATCGTCTTTGAGACGGACA‑GGGTTATGACGTAATCCTGCG‑CGGTGGCCTGC‑TGGGGGCCACCCACGGTTATTATATGGGGGGTAACGCCGCAAACggg > 2:454664/1‑249 (MQ=255) tCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGAAAAAATGAGGTTTGCCCCCTACTTACT‑CGATGCAAAAGCACGCTCTGGTTATCGGCTTGGAGACGGAAA‑GGGTTATGACGGAAACCTGCG‑CGATGGCCCGG‑TGTGCGCCCCCCAAGGGTTTCATATGGGGATTACCGCCCAAAACggg > 1:236989/1‑249 (MQ=255) aGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGCGGGGAAAAATGAGTTTAGCCCCCCACTTAAT‑CGATTCAAAAGCACGCCCTGGTTTTCCGCTTTGAGACGGGCAAGGTTTA‑GACGTAATACTTCG‑CGATGGGCTGT‑TGGGTGCCACCCATGGGTTTCATATGGGGATTACCCCCCAAAAcaggggccaaaaggtcg > 2:320660/1‑235 (MQ=255) tATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTGTGGAAAATATGAGTTTTGCCCCCCACTTACT‑CGATGCAAAAAGACGCGCTGGTTATCGTCTTTGGGAAGGAAA‑GGTTTATGACGTAATCCTCCG‑CGGTGGCCCGA‑AGTGCGCCACCCCTGGTTATCATATGGGGGTTACCGCCGAGAAAGTGGGTAAAGAGTACgg > 1:246899/1‑250 (MQ=255) gtgGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGAGTTTAGCCCCCTACTTACT‑CGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACA‑GGTTTATGACGTAATCCTGCG‑CGATGGCCTGA‑TGTGCGCCACCCATGGTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAAt < 1:186684/250‑1 (MQ=255) gggTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATGCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGAGTTTAGCCCCCTACTTACT‑CGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACA‑GGTTTATGACGTAATCCTGCG‑CGATGGCCTGA‑TGTGCGCCACCCATGGTTATCATATGGGGATTACCGGCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTg < 2:329330/251‑1 (MQ=255) ggTCTTAACAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGGTGGGAAATATGAGTTTAGCCCCCTACTTACT‑CGATGCAAAAGCACGCTCTGGGTATCGTCTTGGAGACGGACA‑GGGTTATGACGTAATCCTTCG‑CGGTGGCCTGA‑TGTGCGCCACCCATGGCTTTTATATGGGGATTAACGCCGAAAAAGGGGGTTAAGAGTACGGAATTACCCGTg > 1:108560/1‑250 (MQ=255) aaaaGTGGGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGTTATGGAAAATATGAGTTTAGCCCCCTACTTACT‑CGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACA‑GGTTTATGACGTAATCCTGCG‑CGATGGCCTGA‑TGTGCGCCACCCATGGTTATCATATGGGAATGACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTGAAATGc < 2:129806/250‑1 (MQ=255) tGCCGCCCAGGCGATTCAGGCAGGTCAGGCGCAGAGCATTTTGGCGGGGGGTAGGGAAAATATGAGTTTAGCCCCCTACTTACT‑CGATGCAAAAGCACCCTCTGGTTATCGTCTTGGAGACGGACA‑GGTTTATGACGTAATCCTGCG‑CGATGGCCTGA‑TGTGCGCCACCCATGGTTATCATATGGGTATTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTGAAATGCAGGATGAACTGgcg < 2:435357/250‑1 (MQ=255) ccAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGAAAAAATGAGTTTAGCCCCCTACTTACT‑CGATGCAAAAACACCCTCTGGTTATCGGCTTGGAGACGGGCA‑GGTTTATGACGTAATCCTGCG‑CGATGGGCTGG‑TGTGCGCCCCCCATGGGTTTCATATGGGGGTTACCCCCCGAAACGGGGCTAAAGAGTACGGAAATACCCGTGAAATGCAGGATGAAATGGCGCTACAtt > 1:89945/1‑251 (MQ=255) aTTCAGGCAGGTCAGGCGCAGAGCATTGGGGCGGGGGGTATGGAAAATATGAGTTTAGCCCCCTACTTACT‑CGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACA‑GGTTTATGACGTAATCCTGCG‑CGATGGCCTGA‑TGTGCGCCACCCATGGTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTGAAATGCAGGATGAACTGGCGCTACATTCACAGCg < 2:63176/251‑1 (MQ=255) caggcaggTGAGGCGGAGAGCATTGTGGCGGGGGGTATGGAAAATATGAGTTTAGCCCCCAACTTACT‑CGATCCAAAAGCACGCGCTGGTTATCGTCTTGGAGACGGACA‑GGTTTATGACGGAA‑CCGGGGTCGAGGGCCTGA‑TGTGCGCCACCCATGGTTATCATATGGGGGTTACCGCCGAAAACGTGGCTATAGAGTACGGAATTACCCGTGATATGCAGGATGAACTGGCTCTACCTTCACAGCGtc < 2:139374/250‑2 (MQ=255) caggcaggTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGAGTTTAGCCCCCTACTTACT‑CGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACA‑GGTTTATGACGTAATCCTGCG‑CGATGGCCTGA‑TGTGCGCCACCCATGGTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTGAAATGCAGGATGAACTGGCGCTACATTCACAGCGTaa < 1:112614/251‑1 (MQ=255) aggcaggTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGAGTTTAGCCCCCTACTTACT‑CGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACA‑GGTTTATGACGTAATCCTGCG‑CGATGGCCTGA‑TGTGCGCCACCCATGGTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTGAAATGCAGGATGAACTGGCGCTACATTCACAGCGTaaa < 1:172483/251‑1 (MQ=255) gcaggTCAGGCGCAGAGCATTGTGGCGGGGGGGGTGGGAAATATGAGTTTAGCCCCCTACTTACT‑CGATGCAAAAACACGCTCTGGTTATCGTCTTGGAGACGGACA‑GGTTTATGACGTAATCCTGCG‑CGATGGCCTGA‑TGTGCGCCACCCATGGGTATCATATGGGGGTTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTGAAATGCAGGAAGAAATGGCGCTACATTTACAGCGTaaaac > 1:292536/1‑249 (MQ=255) cAGGCGAAGAGCATGGTGGCGGGGGGTATGGAAAATATGAGTTTAGCCCCCTACTTACT‑CGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACA‑GGTTTATGACGTAATCCTGCG‑CGATGGCCTGA‑TGTGCGCCACCCATGGTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTGAAATGCAGGATGAACTGGCGCTACATTCACAGCGTAAAGCGGCAGc < 2:246899/251‑1 (MQ=255) agCATTGTGGCGGGGGGTATGGAAAATATGAGTTTAGCCCCCTACTTACT‑CGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACA‑GGTTTATGACGTAATCCTGCG‑CGATGGCCTGA‑TGTGCGCCACCCATGGTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTGAAATGCAGGATGAACTGGCGCTACATTCACAGCGTAAAGCGGCAGCCGCAATTGa < 2:363350/251‑1 (MQ=255) aTTGTGGCGGGGGGTATGGAAAATATGAGTTTAGCCCCCTACTTACT‑CGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACA‑GGTTTATGACGTAATCCTGCG‑CGATGGCCTGA‑TGTGCGCCACCCATGGTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTGAAATGCAGGATGAACTGGCGCTACATTCACAGCGTAAAGCGGCAGCCGCAATTGAGTc < 1:23419/251‑1 (MQ=255) gTATGGAAAATAGGAGTTTAGCCCCCTACTTACT‑CGATGCAAAAGCACGCGCTGGTTATCGTCGTGGAGACGGACA‑GGTTTATGACGTAATCCTGCG‑CGATGGCCTGA‑TGTGCGCCACCCATGTTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTGAAATGCAGGATGAACTGGCGCTACATGCACAGCGGAAAGCGGCAGCCGCAATTGAGTCCGGTGCTTTTACa < 2:146321/251‑1 (MQ=255) | ACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGAGTTTAGCCCCCTACTTACT‑CGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACA‑GGTTTATGACGTAATCCTGCG‑CGATGGCCTGA‑TGTGCGCCACCCATGGTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTGAAATGCAGGATGAACTGGCGCTACATTCACAGCGTAAAGCGGCAGCCGCAATTGAGTCCGGTGCTTTTACA > NC_000913/2326202‑2326699 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |