Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 941,713 | 0 | T | G | 34.9% | 121.4 / 20.2 | 64 | V252G (GTG→GGG) | dmsA | dimethyl sulfoxide reductase subunit A |
Reads supporting (aligned to +/- strand): ref base T (1/40); new base G (22/0); total (24/40) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.36e-16 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
CCGGTACGCTGGGCGGCACCATGACCCGCTCCTGGCCGCCGGGAAATACCCTGGTCGCGCGGCTGATGAACTGCTGCGGCGGCTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGT‑CCGGGAACAGATGCCGCACTGG‑TTAACGGTCTGGCGTACGTCATGATCACTGAAAACCTGGTGGATCAGGCATTCCTCGATAAATATTGCGTTGGCTACGATGAGAAAACCCTGCCAGCCAGTGCGCCGAAAAATGG > NC_000913/941464‑941962 | ccGGTACGCTGGGCGGCACCATGACCCGCTCCTGGCCGCCGGGAAATACCCTGGTCGCGCGGCTGATGAACTGCTGCGGCGGCTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTg < 2:12449/251‑1 (MQ=255) taagCTGGGCGGCACCATGACCCGCTCCTGGACGCCGGGAAATACCCTGGACGCGCGGCTGATGAACTGCTGCGGCGGCTATCTGAACCATTACGGCGACTACACCTCCGGGCAAATTGCGGGAGGTTTGAACTATACCTCCCGCGGCCGGGCACATGGCAACAGACCGTCGGGAGTCGATAACAGTAACCTGGGAGCGCTGTTTGGTTATCACCCTGGTGCAAAGCGAATGAGTGGTGGGGGGGTgggcg > 2:193411/4‑247 (MQ=255) tGGGCGGCACCATGACCCGCTCCTGGCCGCCGGGAAATACCCTGGTCGCGCGGCTGATGAACTGCTGCGGCGGCTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGGGGGGGGACtttatat > 1:284455/1‑246 (MQ=255) gACCCGCTCCTGGCCGCCGGGAAATACCCTGGTCGCGCGGCTGATGAACTGCTGCGGCGGCTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCa < 1:102748/250‑1 (MQ=255) aCCCGCTCCTGGCCGCCGGGAAATACCCTGGTCGCGCGGCTGATGAACTGCTGCGGCGGCTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACg < 1:437409/251‑1 (MQ=255) ccGCTCCTGGCCGCCGGGAAATACCCTGGTCGCGCGGCTGATGAACTGCTGCGGCGGCTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGcc < 2:193650/251‑1 (MQ=255) ggCCGCCGGGAAATACCCTGGTCGCGCGGCTGATGAACTGCTGCGGCGGCTATCTGAACCATTTCGGCGACTACTCCTCCGCGCAAATTGCGTAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGTCAACAGCCCTTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCTAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCt < 1:153822/251‑1 (MQ=255) cgccgGGAAATACCATGGTCGCGCGGCTGATGAACTGCTGCGGCGGCTATCTGAACCATTACGGCGACTACGCAGCCGCGCAAATGGCGGAAGGTTTGAAATATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGAGAGCGAAAAAAGTAAGCTGGTAGTGCTGGTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTaag < 2:48393/251‑2 (MQ=255) ggTCGCGCGGCTGATGAACTGCTGCGGCGGCTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGatcatca < 2:3009/251‑1 (MQ=255) gcgcgcgGCTGATGAACTGCTGCGGCGGCTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGatcatcatc < 2:7224/250‑1 (MQ=255) gcgcgGCTGATGAACTGCTGCGGCGGCTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGa < 2:385344/251‑1 (MQ=255) cgGCTGATGAACTGCTGCGGCGGCTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATcc < 1:353943/251‑1 (MQ=255) gatgaACTGCTGCGGCGGCTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCcgcg < 2:205191/249‑1 (MQ=255) gctgcGGCGGCTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCg < 1:144641/249‑1 (MQ=255) gctgcGGCGGCTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCg < 2:26378/249‑1 (MQ=255) gcggcgGCTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGGGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGAC‑Acc < 2:190207/251‑1 (MQ=255) gcggcTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGACTTACTATCTTGAAAAGGCACGGCAGAAATCCAATACCCGCATGATAATCATAGATCCGCGCCATACCGAC‑CCCggg > 1:73074/1‑250 (MQ=255) gcTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGcc < 1:450845/251‑1 (MQ=255) gtATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATTCCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCg < 2:424054/250‑1 (MQ=255) actactCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATc < 1:239323/251‑1 (MQ=255) actCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCt < 1:138450/251‑1 (MQ=255) cctccGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAGCCCTGGAGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCAGCGATCCGCGCTATACCGAC‑ACCGGGGCCGGGCGCGAAGATGAGTGGATCCCTa < 2:214902/249‑1 (MQ=255) cctccGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTACTTTCTTTAACAGGCACGCCAGAAATCTAATGCCCCCCTGATCCTCCTCGATCCGCGCTATACCGAC‑ACCCGGGCCGGGGGCGAAGATGAGGGGGTCCCTAtt > 1:25955/1‑251 (MQ=255) ccGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTc < 2:127682/249‑1 (MQ=255) ccGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGt < 1:29725/251‑1 (MQ=255) ccGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTACTATCTTTAACAGGCACGCCAGAAATCTAATGCCCGCCTGATCATCATCGATCCCCGCTATACCGAC‑ACCGGGGCCGGGCGCGAAGAAGAGGGGAGcccctttcgt > 1:189210/1‑244 (MQ=255) ccGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGAATTACTATTTTTAACACGCCCGCCCGAAATCTAACGCCCGCATTATCCTCCTCGCTCCCCGCTATACCGAC‑ACCCGTGCCGGGGGCGGAGATgtgggggtcccttatccc > 1:53985/1‑234 (MQ=255) cgcgCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTAATATCTTTAAAAAGAACGCCAGAAATCTAAAGCCCGCATGGACATTATCGATCCCGGCTATACCGAA‑ACCGGTGCCGGGCGCGGAGAGGAGGGGGTCCCTAtttcgc > 1:92066/1‑247 (MQ=255) tttGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTTCTATCTTTAACAGGCACGCCCGAAAACTAATGCCCCCATGATCATCCTCTGTCCCCCCCATACCGCC‑ACCGGGGCCGGGGGCGAAAATGAGTGGGGCCCTATTCGT‑CCGGGGACAGATGCCGcgc > 1:363897/1‑249 (MQ=255) ataCCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGT‑CCGGGAACAGATGCCGCACTGG‑TTAAc < 1:259912/251‑1 (MQ=255) aCCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTACTATCTTTAAAAAGCACGACAGGAAACTAATGGCCGCCTGGTCATCATCGAACCGCGCTATAACGAC‑ACCGGGGCCGGGGGCGGAGATGAGGGGATCCCCATTCCT‑CCGGGGAAAGATGCCGCACTGG‑TTaaagg > 1:178536/1‑248 (MQ=255) ccTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTTGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGT‑CCGGGAACAGATGCCGCACTGG‑TTAAc < 2:320060/248‑1 (MQ=255) ccTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTTGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTTCTATTTTTAACAAGCACGCCCGAAATCTAATTCCCGCATGATCATCATCGATCCCCGCCATACCCAC‑ACCCGGGCCGGGGGCGGAGATGAGTGGGTCCCTATTTGT‑CCCGGGACAGATGCCGCCCTGG‑GTaaaaa > 1:320060/1‑247 (MQ=255) ggcggcTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCt < 1:26693/210‑1 (MQ=255) ggcggcTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGT‑CCGGGAACAGATGCCGCACTGG‑TTAACGGTCTGGc < 1:375828/251‑1 (MQ=255) cAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGT‑CCGGGAACAGATGCCGCACTGG‑TTAACGGTCTGGCGTACGTCATg < 1:279417/251‑1 (MQ=255) cAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGGGGGGGGGCTTACTTTCTTGAACAGGCCCGCCCGAAAACTTATACCCCCCAGGTCCTCATCCAGCCGCGCTCTACCCAC‑CCCCGTGCCGGGCGCGGAGATGAGTTGATCCCTCTTTGT‑CCGGGAACCGATGCCGCCCCGG‑GTAAACGTCTTGCGTACGTCATg > 2:162206/1‑251 (MQ=255) ggCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGAGGGGCGACCTACTATTTTTAACAGGCACGGCCGAAATCGAATACCCGCAAGATCATCATCTATTCGCGCCTTATCGACCACCG‑CGCCCGGCGCCAAGATGAGGGGATCCCCATTCGTACCGGGAA‑AGCTACCGCTCTGG‑GTAACGGTCTGGGGTAAGTCATGagta > 2:91018/1‑247 (MQ=255) gCAACAGCCCGGCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGT‑CCGGGAACAGATGCCGCACTGG‑TTAACGGTCTGGCGTACGTCATGATCACt < 2:186916/251‑1 (MQ=255) cAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTACTATCTTTAAAAGGCACGCCAGAAATCTAATGCCCGCCTGATCATCATCGATCCCCGCTATACCGAC‑ACCGGGGCCGGGCGCGAAGATGAGTGGGTCCCTATTTGT‑CCGGGGAAAGATGCCGCCCTGG‑TTAAAGGTCTGGCGGACGTCATGAACACTg > 1:157534/1‑251 (MQ=255) cAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGGGGGGGGGCTTACTATATTGTACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATACATTCGCGCCATACCGAA‑CCCGGCGCCGGGCGCGGAGATGAGGGGATCCCCCTTCGT‑CCGGGGACAACTGCCGCACTGG‑TTAACGGTCTGGCGGACGCCATGTTCAcctaa > 2:137950/1‑246 (MQ=255) ccGTCGGCTATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGACTTACTATCTTGAACAGGCACGCCCGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCCAC‑ACCGGGGCCGGGCGCGGAGATGAGTGGGTCCCTATTCGT‑CCGGGGACAGATGCCGCCCTGG‑TTAACGGTCTGGCGTACGTCATGATCACTGAAAAccc > 1:82016/1‑250 (MQ=255) cGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGT‑CCGGGAACAGATGCCGCACTGG‑TTAACGGTCTGGCGTACGTCATGATCACTGAAAGCCtggt < 1:45388/250‑1 (MQ=255) ggATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGACTTACTATCTTGAACAGGCCCGCCAGAAATCTAATGACCCCATGATCATCATCGATCCGCGCCATACCGAC‑AACGGTGCCGGGGGCGAAGATGAGTGGATCCCTATTTTT‑CCGGGGACAGATGCCGCCCTGG‑TTAACGGGCTGGCGGACGTCCTTATTACTGAAAAACtggtgg > 1:242044/1‑251 (MQ=255) cGAAAACAGTAAGCTGGTAGTGCTGTTTGGCAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCATCCTTTCCTTAACAGGGACGGCCGAAATCTTATGCCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGGCGGGCGGGAAGATGGGTGGGTCCCTATTTGT‑CCGGGGAAAGATGCCGCCCTGG‑TTAACCGGCTGGCGTACGTCATGATTACTGAAAACCTGGTGGATCAgg > 1:368785/1‑251 (MQ=255) gCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGT‑CCGGGAACAGATGCCGCACTGG‑TTAACGGTCTGGCGTACGTCATGATCACTGAAAACCTGGTGGATCAGGCATTCCTCGATa < 1:251290/251‑1 (MQ=255) tAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGGTTTCTATCTTTAACAAGCACGCCAGAAATATAATGCCCGCATGATCATCCTCGCTCCGCGCTATACCGAC‑ACCCGTGCCGGGCGCGGGGATGTGGGGGGCCCTATTAGT‑CCGGCAACAGAAGCCCCACTGGGTTAA‑GGGCTGGCGTACGGCATGATCACTGAAAAACTTGTGGAGCAGGGATTCCTCTATAAata > 2:391370/1‑250 (MQ=255) aGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGT‑CCGGGAACAGATGCCGCACTGG‑TTAACGGTCTGGCGTACGTCATGATCACTGaaaa < 1:5070/219‑1 (MQ=255) gCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGGCTTACTATCTTTAACAGGCACGCCCGAAAACTAATGCCCCCATGATAAACATCGGTCCGCGCTATACCGAC‑ACCGGGGCCGGGCGCGGAGATGAGTGGGTCCCTATTCGT‑TCGGGGACAGATGCCGCCCTGG‑TTTACGGTCTGGCGTACGGCCTGATCACTGAAAAACTGGGGGGTCAGGCATTTCTCGATAAATAtttcg > 2:446417/1‑248 (MQ=255) gCTGTTTGGTAATAACCCTGGCAAACCGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATGGATCCGCGCTATCCCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGC‑CCGGGAACAGATGCCGCAGTGG‑TTAACGGTCTGGCGTACGTCATTATCGCTAAAAACGGGGTGGACCAGGCATTCCTCGTTAAAGAttccg < 2:197233/251‑4 (MQ=255) gTTTGGTAATATCCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGT‑CCGGGAACAGATGCCGCACTGG‑TTAACGGTCTGGCGTACGTCATGATCACTGAAAACCTGGTGGATCAGGCATTCCTCGATAAATATTGCGTTg < 1:294340/251‑1 (MQ=255) tGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGAGGGGGGGCTTTATATCTTTAAAAGGGACCCCAGAAATCTAATACCCGCCTGGTCATTATTGATACTCGCCATAACGAC‑ACCGGGGGCGGGGGCGGAGATGAGTGGATCCCTCTTTGT‑CCGGGGAAAGAATCCGCCCTGG‑TTAAAGGTCTGGCGGACGTCATGATCACTGGAAACCAGGTGGATCAGGGATTCCTCGATAAATATTGCGTTGGCt > 1:386141/1‑251 (MQ=255) ggTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGT‑CCGGGAACAGATGCCGCACTGG‑TTAACGGTCTGGCGTACGTCATGATCACTGAAAACCTGGTGGATCAGGCATTCCTCGATAAATATTGCGTTGGCt < 1:193411/250‑1 (MQ=255) ggTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGTCGTACTATCTTTTAAATGCACGCCAGAAAACTAATGCCCCCATGAGAATCATTGAAACGCGCTATATCGAC‑ACCCGGGTCGGGCGCGAAGGTGTGTGGGTCCCTATTCTT‑CCCGGAACAGAGGCCCCACCGG‑TTTACGGGCTGGCGGACGTCATGATAACTGAAAACCCGGTGGGTCAGGCATTCCCCGCTAAATAtttaggtggctc > 2:449329/1‑241 (MQ=255) taataaCCCTGGCGAAACGCGAATGAGTGGCGGTGGGGGGACTTTCTATCTTTAAAAGGCACGCCCCAAAACTAAAACCCGCATGATTATCATCGATCCGCGCTATACCCAC‑ACCCGGGGCGGGCGCGAAGATGAGTGGATACCCATTCGT‑CCCGGGACAGAAGCCGCACTGG‑GTAAAGGGCTGGCGGACGTCCAGAGAACTGAAAAACTGGTGGATCAGGGATTTCTTGATAAAATTTTCGTTGGCTACg > 2:452691/1‑251 (MQ=255) aataaCCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGT‑CCGGGAACAGATGCCGCACTGG‑TTAACGGTCTGGCGTACGTCATGATCACTGAAAACCTGGTGGATCAGGCATTCCTCGATAAATATTGCGTTGGCTACg < 1:227142/250‑1 (MQ=255) ccTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGT‑CCGGGAACAGATGCCGCACTGG‑TTAACGGTCTGGCGTACGTCATGATCACTGAAAACCTGGTGGATCAGGCATTCCTCGATAAATATTGCGTTGGCTACGATGAGaa < 1:162206/251‑1 (MQ=255) cTGGCGAAACGCGAATGAGTGGCGGTGGGGGGACTTACTCTCTTTCACAAGCACGGCAGAAAACCAATGCCCGCATGATCAATATCGGTACCAGGTATACCGAA‑ACCGGGGCCGGGGGCGAAGAAGAGGGGATCCCCATTCTG‑CCGGGAACAGACGCCGCCCTGG‑TTAACGGTCTGGCGTACGGCACGATCACTGTAAACCTAGGGGAGCAGGCATTCCTTCAGAAATATTGGGTTGTCTACGATTAGaa > 1:260828/1‑250 (MQ=255) gCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCAGGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGT‑CCGGGAACAGATGCCGCACTGG‑TTAACGGTCTGGCGTACGTCATGATCACTGAAAACCTGGTGGATCAGGCATTCCTCGATAAATATTGCGTTGGCTACGATGAGAAAAcc < 2:445901/251‑1 (MQ=255) aaaCGCGAATGAGTGGCGGTGGGGGGACTTACTATTTTTAACAGGCACGCCCAAAATCTAATGACCGCATTATCATCATCGATCCGCGCTATACCGAC‑ACCGGGGCCGGGCGCGAAGATGAGTGGATCCCTATTCGT‑CCGGGGACAGATGCCGCACTGG‑TTAAAGGTCTGGCGTACGTCCTGATCACTGAAAACCTGGGGGATCAGGCATTCCTCGATAAATATTGCGTTGGCTACGATGAGAAAACCCTg > 1:328984/1‑251 (MQ=255) aaCGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGAGCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGT‑CCGGGAACAGATGCCGCACTGG‑TTAACGGTCTGGCGTACGTCATGATCACTGAAAACCTGGTGGATCAGGCATTCCTCGATAAATATTGCGTTGGCTACGATGAGAAAACCCTgc < 2:242044/251‑1 (MQ=255) gAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGT‑CCGGGAACAGATGCCGCACTGG‑TTAACGGTCTGGCGTACGTCATGATCACTGAAAACCTGGTGGATCAGGCATTCCTCGATAAATATTGCGTTGGCTACGATGAGAAAACCCTGCCAGCCAGTg < 2:25955/251‑1 (MQ=255) ggTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGT‑CCGGGAACAGATGCCGCACTGG‑TTAACGGTCTGGCGTACGTCATGATCACTGAAAACCTGGTGGATCAGGCATTCCTCGATAAATATTGCGTTGGCTACGATGAGAAAACCCTGCCAGCCAGTGCGCCGAAAAATg < 1:446417/251‑1 (MQ=255) gTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGT‑CCGGGAACAGATGCCGCACTGG‑TTAACGGTCTGGCGTACGTCATGATCACTGAAAACCTGGTGGATCAGGCATTCCTCGATAAATATTGCGTTGGCTACGATGAGAAAACCCTGCCAGCCAGTGCGCCGAAAAATgg < 1:137950/251‑1 (MQ=255) | CCGGTACGCTGGGCGGCACCATGACCCGCTCCTGGCCGCCGGGAAATACCCTGGTCGCGCGGCTGATGAACTGCTGCGGCGGCTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGAC‑ACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGT‑CCGGGAACAGATGCCGCACTGG‑TTAACGGTCTGGCGTACGTCATGATCACTGAAAACCTGGTGGATCAGGCATTCCTCGATAAATATTGCGTTGGCTACGATGAGAAAACCCTGCCAGCCAGTGCGCCGAAAAATGG > NC_000913/941464‑941962 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |