Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 3,619,069 Δ18,342 bp rhsB[yhiN] rhsB, yhhH, yhhI, yhhJ, rbbA, yhiI, yhiY, yhiJ, yhiM, [yhiN]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3619069 3637410 18342 45 [0] [0] 45 rhsB–[yhiN] rhsB,yhhH,yhhI,yhhJ,rbbA,yhiI,yhiY,yhiJ,yhiM,[yhiN]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 36190680 (0.000)45 (0.760) 43/494 0.2 100% intergenic (+79/‑124) nikR/rhsB DNA‑binding transcriptional repressor NikR/rhs element protein RhsB
?NC_000913 3637411 = 0 (0.000)intergenic (‑1/‑231) yhiN/pitA putative oxidoreductase YhiN/metal phosphate:H(+) symporter PitA

CAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACAAAAATGCGGATTCTGGCTCAGATAAGCGCCTGGTTCGACATAAAGGTTGGTAAAGTTGCAGCGCCCACCGCCAGACATAAGGATTTTGCGCCCTGGTTTTTTACCATTATCGATCAGCAGAACCCGGCGTCCTGCCTGACCTGCCAGCGCAGAACAGAACATACCCGCCGCACCAGCGCCTATAATAATGGCATCAAACCTTTCCACGTTGCGCTCCTCTTAGAAAAAACGGGCGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCAAAAAAAGTCTATATTTCACTTTGCCCGCGCCGCGAAAGTCACTGATAATGCGCCGCGTTCATGTCCTCAAAATGGCGTAACGTCCTATGCTACATTTG  >  NC_000913/3637161‑3637653
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                  
cacctctacctctccgtcgccacgctgcatgtgcacatcaacctcgacgactgtctggaaatcgccgtgttgaaaggtgacatgggtgacgtgcagcattttgccgatgacgttatcgcccagcgcggcgtgcggcacgggcatttgcagtgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgtttcctctctaaataccctatccgag                                                                                                                                                                                                                                                    <  2:159724‑M2/1‑1 (MQ=255)
   cacgacctctccgtcgccacgctgcatgtgcacatcaaccacgacgactgtctggaaatcgccgtgttgaaaggtgacatgggtgacgtgcagcattttgccgatgacgttatcgcccagcgcggcgtgcggcacgggcatttgcagtgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTg                                                                                                                                                                                                                                                 <  1:9806‑M2/4‑1 (MQ=255)
      gacctctccgtcgccacgctgcatgtgcacatcaaccacgacgactgtctggaaatcgccgtgttgaaaggtgacatgggtgacgtgcagcattttgccgatgacgttatcgcccagcgcggcgtgcggcacgggcatttgcagtgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTgcgc                                                                                                                                                                                                                                              >  1:96274‑M2/245‑251 (MQ=255)
              cgtcgccacgctgcatgtgcacatcaaccacgacgactgtctggaaatcgccgtgttgaaaggtgacatgggtgacgtgccgcagtttgccgatgacgttctcgcccagcgcggcgtgcggcacgggcatttgcagtgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTa                                                                                                                                                                                                                                      <  2:106839‑M2/15‑1 (MQ=255)
                    cacgctgcatgtgcacatcaaccacgacgactgtctggaaatcgccgtgttgaaaggtgacatgggtgacgtgcagcattttgccgatgacgttatcgcccagcgcggcgtgcggcacgggcatttgcagtgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAaaaaaa                                                                                                                                                                                                                                <  1:320232‑M2/21‑1 (MQ=255)
                        ctgcatgtgcacatcaaccacgacgactgtctggaaatcgccgtgttgaaaggtgacatgggtgacgtgcagcattttgccgatgacgttatcgcccagcgcggcgtgcggcacgggcatttgcagtgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACgg                                                                                                                                                                                                                            >  2:338453‑M2/227‑250 (MQ=255)
                         tgcatgtgcacatcaaccacgacgactgtctggaaatcgccgtgttgaaaggtgacatgggtgacgtgcagcattttgccgatgacgttatcgcccagcgcggcgtgcggcacgggcatttgcagtgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAacggac                                                                                                                                                                                                                          >  1:329528‑M2/226‑249 (MQ=255)
                          gcatgtgcacatcaaccacgacgactgtctggaaatcgccgtgttgaaaggtgacatgggtgacgtgcagcattttgccgatgacgttatcgcccagcgcggcgtgcggcacgggcatttgcagtgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAAcgga                                                                                                                                                                                                                           <  2:39785‑M2/25‑2 (MQ=255)
                              gtgcacatcaaccacgacgactgtctggaaatcgccgtgttgaaaggtgacatgggtgacgtgcagcattttgccgatgacgttatcgcccagcgcggcgtgcggcacgggcatttgcagtgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACGGACGTGaa                                                                                                                                                                                                                     <  1:285012‑M2/31‑1 (MQ=255)
                                    atcaaccacgacgactgtctggaaatcgccgtgttgaaaggtgacatgggtgacgtgcagcattttgccgatgacgttatcgcccagcgcggcgtgcggcacgggcatttgcagtgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTaa                                                                                                                                                                                                               <  1:133612‑M2/37‑1 (MQ=255)
                                      cagccacgacgtctgtctggaaagtgccgtgttgaaaggggacatgggtgacgtgcagcattttgccgatgacgttatcgcccagcgcggcgtgcggcacgggcatttgcagtgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctgaccgaGTTGCGCTCCTCTTAAAAAAACGGACGTAAATTGTAAAg                                                                                                                                                                                                             <  2:72976‑M2/39‑1 (MQ=255)
                                           acgacgactgtctggaaatcgccgtgttgaaaggtgacatgggtgacgtgcagcattttgccgatgacgttatcgcccagcgcggcgtgcggcacgggcatttgcagtgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTcc                                                                                                                                                                                                        <  2:436198‑M2/44‑1 (MQ=255)
                                             gacgactgtctggaaatcgccgtgttgaaaggtgacatgggtgacgtgcagcattttgccgatgacgttatcgcgcagcgcggcgtgcggcacgggcatttgcagtgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTc                                                                                                                                                                                                      <  2:215602‑M2/46‑1 (MQ=255)
                                                    gtctggaaatcgccgtgttgaaaggtgacaggggtgacgtgcagcattttgccgatgtcgttatcgcccagcgcggcgtgcggcacgggcatttgcagtgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTc                                                                                                                                                                                               <  2:63854‑M2/53‑1 (MQ=255)
                                                       gggaaatcgccgtgtgtaaaggtgacatgggtgacgtgctgcaatttgccgatgccgttatcgaccagcgcggcgtgcggcacgggcatttgcagtgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTTCCCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCa                                                                                                                                                                                            <  1:33643‑M2/56‑1 (MQ=255)
                                                                 cgtgttgaaaggtgacatgggtgacgtgcagcattttgccgatgacgttatcgcccagcgcggcgtgcggcacgggcatttgcagtgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCaa                                                                                                                                                                                  <  1:338453‑M2/66‑1 (MQ=255)
                                                                    gttgaaaggtgacatgggtgacgtgcagcattttgccgatgacgttatcgcccagcgcggcgtgcggcacgggcatttgcagtgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAatat                                                                                                                                                                               <  1:11170‑M2/69‑1 (MQ=255)
                                                                    gttgaaaggcgacatgggcgacgtgcagcattttgccgatgacgttataccctagcgcagcgtgcggcacgggcatttgcagtgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGGTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTCAAGATTCCTCAGtgctcgccccatcagccatct                                                                                                                                                                               >  2:218841‑M2/183‑241 (MQ=255)
                                                                       gaaaggtgacatgggtgacgtgcagcattttgccgatgacgttatcgcccagcgcggcgtgcggcacgggcatttgcagtgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTAc                                                                                                                                                                            >  1:450804‑M2/180‑251 (MQ=255)
                                                                          aggtgacgtgggtgacgtgcagcattttgccgatgacgttatcggccagcgcggcgtgcggcacgggcatttgcagtgcttgccgaaggaagattgagtctatgagtgggtcctttggtgaacgatcaacaaagggccactagcacacctgattccgctctaaatacccgatccgaGTTGCGCACCTCTTAAAAAGACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCGTCAATATTACTaa                                                                                                                                                                         <  2:96578‑M2/75‑1 (MQ=255)
                                                                              gacatgggtgacgtgcagcattttgccgatgacgttatcgcccagcgcggcgtgcggcacgggcatttgcagtgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAgg                                                                                                                                                                     <  1:369766‑M2/79‑1 (MQ=255)
                                                                                 atgggtgacgtgcagcattttgccgatgacgttatcgcccagcgcggcgtgcggcacgggcatttgcagtgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGa                                                                                                                                                                    >  1:306197‑M2/170‑249 (MQ=255)
                                                                                    ggtgacgtgcagcattttgccgatgacgttatcgcccagcgcggcgtgcggcacgggcatttgcagtgcttgccgtaggaagattgcgtctattattgggtcctttggtgaacgatcaacaaagggccactagcccacctgattcctctctaaataccctatccgcGTTGCGCTCCTCTTACTACAACGGACGTGACTTGTAATGATTCCTCAGTCGTCGCTCCAGCATCAATATTACTATAAGGCAGTAt                                                                                                                                                               >  2:177172‑M2/167‑251 (MQ=255)
                                                                                     gggacgtgcagcattttgccgatgacgttatcgcccagcgcggcgtgcggcacgggcatttgcagtgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTAtt                                                                                                                                                              <  2:139444‑M2/86‑1 (MQ=255)
                                                                                                      gccgatgacgttatcgcccagcgcggcgtgcggcacgggcatttgcagtgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATaa                                                                                                                                              <  2:252963‑M2/102‑1 (MQ=255)
                                                                                                        cgatgacgttatcgcccagcgcggcgtgcggcacgggcatttgcagtgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGAt                                                                                                                                           <  2:343317‑M2/105‑1 (MQ=255)
                                                                                                         gatgacgttatcgcccagcgcggcgtgcggcacgggcatttgcagtgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGAt                                                                                                                                           >  1:444063‑M2/146‑250 (MQ=255)
                                                                                                          atgacgttatcgcccagcgcggcgtgcggcacgggcatttgcagtgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATaa                                                                                                                                         <  2:72712‑M2/107‑1 (MQ=255)
                                                                                                                  atcgcccagcgcggcgtgcggcacgggcatttgcagtgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTAttttt                                                                                                                                 >  1:220659‑M2/137‑251 (MQ=255)
                                                                                                                                cgtgcggcacgggcatttgcagtgcttgccgacggaagattgagtctattatagggtcctttggagaacgatcaacacagggccactagcacacctgattcctatctaaataccctatcagaGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAACGCTTCCTCAGCGGTCGCACCAGCATCAATATTACTAAAAGGAAGACTTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAACTCCAt                                                                                                                   >  1:151507‑M2/123‑251 (MQ=255)
                                                                                                                                     ggcacgggcatttgcagtgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAgg                                                                                                              <  2:259282‑M2/134‑1 (MQ=255)
                                                                                                                                                    agtgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCaaaaaa                                                                                               <  2:364426‑M2/149‑1 (MQ=255)
                                                                                                                                                      tgcttgccgaaggaagattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCaaaaaa                                                                                               >  2:431232‑M2/101‑249 (MQ=255)
                                                                                                                                                                aggcagattgagtctattcttgggtcctttggtgcacgatcaacacagggccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACGGCCGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCAAAAAAAGTCTATATTTc                                                                                   >  2:120237‑M2/91‑251 (MQ=255)
                                                                                                                                                                    agattgagtctattattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCAAAAAAAGTCTATATTTCACtt                                                                               <  2:306197‑M2/165‑1 (MQ=255)
                                                                                                                                                                               attattgggtcctttggtgaacgatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCAAAAAAAGTCTATATTTCACTTTGCccgcgccg                                                                    <  1:387220‑M2/176‑1 (MQ=255)
                                                                                                                                                                                                     gatcaacaaagggccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCAAAAAAAGTCTATATTTCACTTTGCCCGCGCCGCGAAAGTCACTGATAATGcgcc                                              >  2:191511‑M2/54‑251 (MQ=255)
                                                                                                                                                                                                           caaagggccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCAAAAAAAGTCTATATTTCACTTTGCCCGCGCCGCGAAAGTCACTGATAATGCGCCGCGTTc                                        <  1:4069‑M2/204‑1 (MQ=255)
                                                                                                                                                                                                                 gccactagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCAAAAAAAGTCTATATTTCACTTTGCCCGCGCCGCGAAAGTCACTGATAATGCGCCGCGTTCATGTcc                                  <  2:329528‑M2/210‑1 (MQ=255)
                                                                                                                                                                                                                    actagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGACGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCAAAAAAAGTCTATATTTCACTTTGCCCGCGCCGCGAAAGTCACTGATAATGCGCCGCGTTCATGTCCTc                                >  1:84896‑M2/39‑250 (MQ=255)
                                                                                                                                                                                                                     ctagcacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCAAAAAAAGTCTATATTTCACTTTGCCCGCGCCGCGAAAGTCACTGATAATGCGCCGCGTTCATGTCCTCa                               >  1:335872‑M2/38‑250 (MQ=255)
                                                                                                                                                                                                                         cacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCAAAAAAAGTCTATATTTCACTTTGCCCGCGCCGCGAAAGTCACTGATAATGCGCCGCGTTCATGTCCTCAAAATg                          >  2:277774‑M2/34‑251 (MQ=255)
                                                                                                                                                                                                                         cacacctgattcctctctaaataccctatccgaGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCAAAAAAAGTCTATATTTCACTTTGCCCGCGCCGCGAAAGTCACTGATAATGCGCCGCGTTCATGTCCTCAAAATg                          <  2:140364‑M2/218‑1 (MQ=255)
                                                                                                                                                                                                                                 attcctctctaaataccctatccgaGTTGACCTCCTCTTAAAAAAACGGACGAGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCAAAAAAAGTATATATTTCACTTTGCCCGCGCCGCGAAAGTCACTGATAATGCGCCGCGTTCATGTCCTCAAAATGGCGTAACg                  >  1:292402‑M2/26‑251 (MQ=255)
                                                                                                                                                                                                                                                 cctatccgaGTTGCGCTCCTCTTAAAAAAACGGACGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCAAAAAAAGTCTATATTTCACTTTGCCCGCGCCGCGAAAGTCACTGATAATGCGCCGCGTTCATGTCCTCAAAATGGCGTAACGTCCTATGCTACAtttg  <  2:220659‑M2/242‑1 (MQ=255)
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                  
CAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACAAAAATGCGGATTCTGGCTCAGATAAGCGCCTGGTTCGACATAAAGGTTGGTAAAGTTGCAGCGCCCACCGCCAGACATAAGGATTTTGCGCCCTGGTTTTTTACCATTATCGATCAGCAGAACCCGGCGTCCTGCCTGACCTGCCAGCGCAGAACAGAACATACCCGCCGCACCAGCGCCTATAATAATGGCATCAAACCTTTCCACGTTGCGCTCCTCTTAGAAAAAACGGGCGTGAATTGTAAAGATTCCTCAGTGGTCGCACCAGCATCAATATTACTAAAAGGAAGTATTTGCCTGAATTATATAAGATAATTATTTTTTGAGTGAAATCCATACAGGGGGCAAATCAAAAAAAGTCTATATTTCACTTTGCCCGCGCCGCGAAAGTCACTGATAATGCGCCGCGTTCATGTCCTCAAAATGGCGTAACGTCCTATGCTACATTTG  >  NC_000913/3637161‑3637653

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: