| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,466,540 | 9636 bp→ACCC | intS–[ypdJ] | 15 genes intS, yfdG, yfdH, yfdI, yodE, yfdK, yfdM, yfdN, yfdO, yfdP, yfdQ, yfdR, yfdS, [yfdT], [ypdJ] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2466540 | 2476175 | 9636 | 31 [0] | [0] 30 | intS–[ypdJ] | intS,yfdG,yfdH,yfdI,yodE,yfdK,yfdM,yfdN,yfdO,yfdP,yfdQ,yfdR,yfdS,[yfdT],[ypdJ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2466539 | 0 (0.000) | 30 (0.520) +ACCC |
30/486 | 0.6 | 100% | intergenic (+156/‑6) | argW/intS | tRNA‑Arg/prophage CPS‑53 integrase |
| ? | NC_000913 | 2476176 = | 0 (0.000) | coding (304/306 nt) coding (83/141 nt) |
yfdT ypdJ |
protein YfdT putative uncharacterized protein YpdJ |
|||||
AGCCTAGAGGTTCGAGACGATATTGAGCGCCGTGCTTATGAAATCGCACTCGTATCTCTGGAAGTAGAGCCAGATGAACGCGAAGCCTATGAATTATTCATGGAAAAGCGTTTCGGTGACTTAGTAGATCGTCGGAGAGCAAAAAACGGCGATAACGAATACATGGCATGGGATATGACTCTCGGTTGGATCATCTGGCAGCAACGAGCTGGTATCCATTTTTCAACAATGTCACAACAAGAGGTGAAATAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTAAAACCTTCATCTATGACCGGATTAAGTCAG > NC_000913/2475927‑2476409 | actcatgccgcattgtcctcttagttaaatggatataacgagcccctcctaagggctaattgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttaccct > 2:433641‑M2/250‑250 (MQ=255) aacgagcccctcctaagggctaattgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGt < 2:199471‑M2/38‑1 (MQ=255) gcccctcctaagggctaattgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGtt < 1:273692‑M2/43‑1 (MQ=255) cccctcctaagggctaattgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGttt < 1:126272‑M2/44‑1 (MQ=255) ctcctaagggctaattgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCtt > 2:336850‑M2/205‑251 (MQ=255) ggctaattgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATc < 1:82322‑M2/55‑1 (MQ=255) ctaattgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTaaaatatact > 1:70707‑M2/195‑248 (MQ=255) gcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCt < 2:239622‑M2/62‑1 (MQ=255) caggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTAc < 1:208343‑M2/64‑1 (MQ=255) ggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCa < 2:376465‑M2/66‑1 (MQ=255) tcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGt < 1:406599‑M2/73‑1 (MQ=255) tcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGCTGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTAcc > 2:456678‑M2/157‑251 (MQ=255) cccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAg < 2:91844‑M2/105‑1 (MQ=255) catccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGt > 2:181860‑M2/145‑251 (MQ=255) gtaccagtccgcaaaaccccctgaatatcaagcagtccgtagatttacaggtcttcatggttcgcttcagatcgttgacagcctcactccatgacgggtaaaaagtggataaaataatgttacccaccggagtttacccTAATAGAGCCATGCAGCCTCACACGCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGGATTTTTATTACCTGATTTGCAGGTTCGAt < 2:412175‑M2/112‑1 (MQ=255) agtccgcaaaatcccctgaatatcaagcatgccgtagatttacagttcgtcatgggtcgcttcagagcgtggacaggcgcactccatggcgggtaaaaagtggataaaataagtttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGAATGGCAGGTTCTATTCCCt < 2:99507‑M2/117‑1 (MQ=255) aaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCgg > 1:208206‑M2/128‑250 (MQ=255) caagcattccgtagatttacagttcgtctgggtacgctgcagatcgctgacagccgcactccatggcgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTTACACTCGATGAGTCCTGTCAGTTTCGTAAAAGATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGAGTTTCACGTTCGATTCCCTAGTCGGAGATAGCACTCATGCa < 2:434329‑M2/139‑1 (MQ=255) caagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccacaggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGAACTCATGCa > 2:319973‑M2/112‑250 (MQ=255) agcattccgtagctttacagttcgtcatagttcgcttcagatcgttgacagccgcactccctgacgggtaaaaagtggatacaataattttacccaccggattttacacTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCCGGTTCGATTCCCTATTCGGAGATAGCACTCATGCaacc > 2:165960‑M2/110‑250 (MQ=255) agatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacgcTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAGCACGAACTACa < 1:151201‑M2/151‑1 (MQ=255) gcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGaa < 1:433641‑M2/175‑1 (MQ=255) cagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATtc < 1:103965‑M2/179‑1 (MQ=255) atccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGGCTCACGCTCGATGAGGCCTGTCAGTTTCTTAAAATCTCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTTATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGAt < 1:162944‑M2/191‑1 (MQ=255) cgcactccatgacgggtaaaaagtggataaaataattgtgcccaccggatttttcccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTTTTAAAATATCCTGATCTACCATCGCCGTCATATAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGATATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACt < 1:363199‑M2/194‑1 (MQ=255) acgggtaaaaagtggataaaataattttacccaccggattttacccTAATCGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTa > 1:420994‑M2/47‑250 (MQ=255) cgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTaa > 1:243503‑M2/46‑250 (MQ=255) aaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACATTCGATAAGGCCTGTCAGTTTCTTAAAATATCCTGTTCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACCACCTGCTTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTAAAACCtt > 2:13614‑M2/41‑251 (MQ=255) attttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTAAAACCTTCATCTATGACCGGAtt > 1:317227‑M2/24‑250 (MQ=255) cccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTAAAACCTTCATCTATGACCGGATTAAGTCAg < 1:31844‑M2/234‑1 (MQ=255) | AGCCTAGAGGTTCGAGACGATATTGAGCGCCGTGCTTATGAAATCGCACTCGTATCTCTGGAAGTAGAGCCAGATGAACGCGAAGCCTATGAATTATTCATGGAAAAGCGTTTCGGTGACTTAGTAGATCGTCGGAGAGCAAAAAACGGCGATAACGAATACATGGCATGGGATATGACTCTCGGTTGGATCATCTGGCAGCAACGAGCTGGTATCCATTTTTCAACAATGTCACAACAAGAGGTGAAATAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTAAAACCTTCATCTATGACCGGATTAAGTCAG > NC_000913/2475927‑2476409 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |