Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,410,081 13624 bp→ATGC yjfI[ulaF] 18 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4410081 4423704 13624 66 [0] [0] 66 yjfI–[ulaF] yjfI,yjfJ,yjfK,yjfL,yjfM,yjfC,aidB,yjfN,bsmA,yjfP,ulaR,ulaG,ulaA,ulaB,ulaC,ulaD,ulaE,[ulaF]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 44100800 (0.000)65 (1.120)
+ATGC
59/486 0.0 100% intergenic (+74/‑53) rlmB/yjfI 23S rRNA 2'‑O‑ribose G2251 methyltransferase/DUF2170 domain‑containing protein YjfI
?NC_000913 4423705 = 0 (0.000)coding (6/687 nt) ulaF L‑ribulose‑5‑phosphate 4‑epimerase UlaF

GACCGGACGCCTGGCGCTGGTGATGGGTGCGGAAGGTGAAGGTATGCGTCGCCTGACTCGTGAACATTGCGATGAGTTGATCAGCATCCCGATGGCTGGAAGCGTTTCTTCCCTGAACGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTATTGCAAATATTCATTTTATTAATATTTAAACTTAATCTATATGGAATAATATATGACATGGAATCCGTTGGCGCTAGCGACGGCGCTGCAAACTGTACCTGAACAAAATATTGATGTAACAAATAGCGAGAACGCATTAATTATTAAAATGAATGATTATGGCGATTTGCAAATCAATATTCTTTTTACTTCCCGCCAAATGATTATCGAAACCTTTATTTGTCCGGTGAGTAGTATCAGCAAT  >  NC_000913/4409835‑4410324
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                    
gACCGGACGCCTGGCGCTGGTGATGGGTGCGGAAGGTGAAGGTATGCGTCGCCTGACTCGTGAACATTGCGATGAGTTGATCAGCATCCCGATGGCTGGAAGCGTTTCTTCCCTGAACGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgc                                                                                                                                                                                                                                                  >  1:427638‑M1/1‑246 (MQ=255)
    ggACGCCTGGCGCTGGTGATGGGTGCGGACGGTGAAGGTATGCGTCGCCTGACTCGTGAACATTGCGATGAGGTGATCAGCATCCCGATGGCTGGAAGCGTTTCTTCCCTGAACGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGTGCGCCGGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagc                                                                                                                                                                                                                                             >  2:37824‑M1/1‑242 (MQ=255)
            ggCGCTGGTGATGGGTGCGGAAGGTGAAGGTATGCGTCGCCTGACTCGTGAACATTGCGATGAGTTGATCAGCATCCCGATGGCTGGAAGCGTTTCTTCCCTGAACGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacag                                                                                                                                                                                                                                     <  2:61195‑M1/251‑18 (MQ=255)
            ggCGCTGGTGATGGGTGCGGAAGGTGAAGGTATGCGTCGCCTGACTCGTGAACATTGCGATGAGTTGATCAGCATCCCGATGGCTGGAAGCGTTTCTTCCCTGAACGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaac                                                                                                                                                                                                                                       <  1:428762‑M1/249‑16 (MQ=255)
              cgcTGGTGATGGGTGCGGAAGGTGAAGGTATGCGTCGCCTGACTCGTGAACATTGCGATGAGTTGATCAGCATCCCGATGGCTGGAAGCGTTTCTTCCCTGAACGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagc                                                                                                                                                                                                                                    >  2:191014‑M1/1‑232 (MQ=255)
                          gTGCGGAAGGTGAAGGTATGCGTCGCCTGACTCGTGAACATTGCGATGAGTTGATCAGCATCCCGATGGCTGGAAGCGTTTCTTCCCTGAACGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgatgc                                                                                                                                                                                                                       >  2:190785‑M1/1‑220 (MQ=255)
                             cGGAAGGTGAAGGTATGCGTCGCCTGACTCGTGAACATTGCGATGAGTTGATCAGCATCCCGATGGCTGGAAGCGTTTCTTCCCTGAACGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagcca                                                                                                                                                                                                                     >  1:223799‑M1/1‑217 (MQ=255)
                                  ggtgaaggtATGCGTCGCCTGACTCGTGAACATTGCGATGAGTTGATCAGCATCCCGATGGCTGGAAGCGTTTCTTCCCTGAACGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatgg                                                                                                                                                                                                               >  1:132413‑M1/1‑212 (MQ=255)
                                     gaaggtATGCGTCGCCTGACTCGTGAACATTGCGATGAGTTGATCAGCATCCCGATGGCTGGAAGCGTTTCTTCCCTGAACGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagc                                                                                                                                                                                                            >  1:212059‑M1/1‑209 (MQ=255)
                                      aaggtATGCGTCGCCTGACTCGTGAACATTGCGATGAGTTGATCAGCATCCCGATGGCTGGAAGCGTTTCTTCCCTGAACGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagct                                                                                                                                                                                                           >  1:104203‑M1/1‑208 (MQ=255)
                                           atgcgtcggcgggcccgtggacatttcgattAGTTGATCAGCATCCCGGTGGCTGGAAGCGTTTCTTCCCTGAACGGTTCGGTTGCTGCCGGAATTTGCTTATTTGAAGGGGTGCGCCAGCGCAGCTAATTTCTTAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgc                                                                                                                                                                                                      <  1:366204‑M1/236‑49 (MQ=255)
                                           aTGCGTCGCCTGACTCGTGAACATTGCGATGAGTTGATCAGCATCCCGATGGCTGGAAGCGTTTCTTCCCTGAACGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgacgccaacatggagctgccg                                                                                                                                                                                                       <  1:193004‑M1/250‑48 (MQ=255)
                                                  gCCTGACTCGTGAACATTGCGATGAGTTGATCAGCATCCCGATGGCTGGAAGCGTTTCTTCCCTGAACGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGGAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgg                                                                                                                                                                                               >  1:120372‑M1/1‑196 (MQ=255)
                                                       aCTCGTGAACATTGCGATGAGTTGATCAGCATCCCGATGGCTGGAAGCGTTTCTTCCCTGAACGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctgg                                                                                                                                                                                          >  1:111366‑M1/1‑191 (MQ=255)
                                                          cGTGAACATTGCGATGAGTTGATCAGCATCCCGATGGCTGGAAGCGTTTCTTCCCTGAACGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtg                                                                                                                                                                                        >  1:175501‑M1/1‑188 (MQ=255)
                                                                          aGTTGATCAGCATCCCGATGGCTGGAAGCGTTTCTTCCCTGAACGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGTGCGCCAGCGCCGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacatttacctggggca                                                                                                                                                                        >  2:314102‑M1/1‑172 (MQ=255)
                                                                          aGTTGATCAGCATCCCGATGGCTGGAAGCGTTTCTTCCCTGAACGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaa                                                                                                                                                                       <  1:162817‑M1/251‑80 (MQ=255)
                                                                              gATCAGCATCCCGATGGCTGGAAGCGTTTCTTCCCTGAACGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgt                                                                                                                                                                    <  2:89596‑M1/250‑83 (MQ=255)
                                                                                 cAGCATCCCGATGGCTGGAAGCGTTTCTTCCCTGAACGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagc                                                                                                                                                                >  1:450249‑M1/1‑165 (MQ=255)
                                                                                  aGCATCCCGATGGCTGGAAGCGTTTCTTCCCTGAACGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTCTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggaatttgaagccaacatggagctgccgcgctacgagctggtgacctttacctggggcaacgtcagcgc                                                                                                                                                              >  2:436562‑M1/1‑163 (MQ=255)
                                                                                       cccGATGGCTGGAAGCGTTTCTTCCCTGAACGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatc                                                                                                                                                          >  1:11420‑M1/1‑159 (MQ=255)
                                                                                          gATGGCTGGAAGCGTTTCTTCCCTGAACGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgac                                                                                                                                                       <  1:296830‑M1/251‑96 (MQ=255)
                                                                                                 ggAAGCGTTTCTTCCCTGAGCGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaa                                                                                                                                                 <  1:50971‑M1/250‑102 (MQ=255)
                                                                                                         ttcttcCCTGAACGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGAGCGCCAGCGCCGCTAATTTCTCAGAATTATGAAAAGCCATACAGCTTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaacgctaaaacagcaggtatttgaagcctacatggagctgccgcgctacgggcaggtgacctatacctggggcaacgtcagcgctatcgaccgcgagcgcgggctg                                                                                                                                        >  2:47312‑M1/1‑141 (MQ=255)
                                                                                                            ttcCCTGAACGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtg                                                                                                                                     >  2:39777‑M1/1‑138 (MQ=255)
                                                                                                             tcCCTGAACGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtgg                                                                                                                                    >  1:363063‑M1/1‑137 (MQ=255)
                                                                                                              cccTGAACGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggt                                                                                                                                   <  1:60697‑M1/251‑116 (MQ=255)
                                                                                                                                               tATTTGAAGCGGTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaacc                                                                                                    <  1:191014‑M1/249‑147 (MQ=255)
                                                                                                                                               tATTTGAAGCGGTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaacc                                                                                                    <  2:104618‑M1/249‑147 (MQ=255)
                                                                                                                                                  ttGAAGCGGTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccatga                                                                                                <  1:284993‑M1/250‑151 (MQ=255)
                                                                                                                                                     aaGCGGTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccatgaaagc                                                                                            <  2:120372‑M1/251‑155 (MQ=255)
                                                                                                                                                          gTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccatgaaaacggccg                                                                                       >  1:21027‑M1/1‑92 (MQ=255)
                                                                                                                                                           agcgccAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagcttccgcgctacgggctggtgacctttacctggggcaacgccagcgctatcgaccgcgaacgccggctggtggcgatcaaggccagcggcgttgcctacgacacaatgaacgcggccgg                                                                                      >  2:200016‑M1/2‑91 (MQ=255)
                                                                                                                                                              gcCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccatgaaagcggccgatat                                                                                   <  1:190007‑M1/251‑164 (MQ=255)
                                                                                                                                                                     cAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccatgaaagcggccgatatggtggtg                                                                            >  1:143175‑M1/1‑81 (MQ=255)
                                                                                                                                                                      aGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgaccttt                                                                                                                                                                                  >  1:451262‑M1/1‑80 (MQ=255)
                                                                                                                                                                      aGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgaccttt                                                                                                                                                                                  <  2:451262‑M1/148‑69 (MQ=255)
                                                                                                                                                                          aaTTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccatgaaagcggccgatatggtggtggttg                                                                        >  1:362530‑M1/1‑76 (MQ=255)
                                                                                                                                                                          aaTTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccatgaaagcggccgatatggtggtggtt                                                                         <  1:124310‑M1/249‑174 (MQ=255)
                                                                                                                                                                             ttCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccatgaaagcggccgatatggtggtggttgata                                                                     <  2:212059‑M1/250‑178 (MQ=255)
                                                                                                                                                                                    aaTTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccatgaaagcggccgatatggtggtgggtgatatgagcggc                                                             >  2:304121‑M1/1‑66 (MQ=255)
                                                                                                                                                                                     aTTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacg                                                                                                         >  1:70705‑M1/1‑65 (MQ=255)
                                                                                                                                                                                     aTTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacg                                                                                                         <  2:70705‑M1/206‑142 (MQ=255)
                                                                                                                                                                                           aaaaGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaaagcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccatgaaagcggccgatatggtggtggttgatatgagcggcaaggagg                                                      >  2:430322‑M1/1‑59 (MQ=255)
                                                                                                                                                                                            aaaGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccatgaaagcggccgatatggtggtggttgatatgagcggcaaggtggt                                                     <  1:145078‑M1/251‑194 (MQ=255)
                                                                                                                                                                                            aaaGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccatgaaagcggccgatatggtggtggttgatatgagcggcaaggtggg                                                     >  1:331870‑M1/1‑58 (MQ=255)
                                                                                                                                                                                             acgccATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGCTACTTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgacgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgcccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgacacaatgcaagcggccgatctggtggtggttgatatgtgcggcaagggggtg                                                    >  2:368107‑M1/3‑57 (MQ=255)
                                                                                                                                                                                              aGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcacagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccatgaaagcggccgatatggtggtggttgatatgagcggcaaggtggtgg                                                   <  1:456052‑M1/251‑196 (MQ=255)
                                                                                                                                                                                                 cATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcagttagttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccatgaaagcggccgatatggtggtggttgatatgagcggcaaggtggtggaag                                                <  1:368107‑M1/251‑199 (MQ=255)
                                                                                                                                                                                                        aTTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccatgaaagcggccgatatggtggtggttgatatgagcggcaaggtggtggaaggggagt                                          >  1:143565‑M1/1‑46 (MQ=255)
                                                                                                                                                                                                         tttGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccctgaaagcggccgatatcgtggtggttgatatgagcggcacggtggtggtcggggaggat                                        >  2:196595‑M1/1‑45 (MQ=255)
                                                                                                                                                                                                            ggATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccatgaaagcggccgatatggtggtggttgatatga                                                                  >  1:402974‑M1/1‑42 (MQ=255)
                                                                                                                                                                                                            ggATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccatgaaagcggccgatatgggggtggttgatatga                                                                  <  2:402974‑M1/222‑181 (MQ=255)
                                                                                                                                                                                                             gATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaaaagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccatgaaagcggccgatatggtggtggttgatatgagcggcaaggtggtggaaggggagtatcgcc                                    >  1:404595‑M1/1‑41 (MQ=255)
                                                                                                                                                                                                              aTGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccatgaaagcggccgatatggtggtggttgatatgagcggcaaggtggtggaaggggagtatcgccc                                   <  1:103191‑M1/251‑212 (MQ=255)
                                                                                                                                                                                                                   gtttgtttgtttaTAGCTTGTAAGATAATTACTTTatgccaagcgcagccagcaggtatttgaagcaaatatggagctgccgcgctacgggctggtgaccgttaccgggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccatgaaagcggccgagatggtggtggctgatatgagcggcaaggtggtggaaggggagtatcgcccatctt                              <  2:94533‑M1/246‑217 (MQ=255)
                                                                                                                                                                                                                             cTATAGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccatgaaagcggccgatatggtggtggttgatatgagcggcaaggtggtggaaggggagtatcgcccatcttccgacactgc                    >  1:70752‑M1/1‑25 (MQ=255)
                                                                                                                                                                                                                               ataGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccatgaaagcggccgatatggtggtggttgatatgagcggcaaggtggtggaaggggagtatcgcccatcttccgacactgcg                   >  1:56177‑M1/1‑23 (MQ=255)
                                                                                                                                                                                                                               ataGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccatgaaagcggccgatatggtgggggttgatatgagcggcaaggtggtggaaggggagtatcgcccatcttccgacactgcgg                  >  2:174812‑M1/1‑23 (MQ=255)
                                                                                                                                                                                                                               acagcTGGTACGATACTTACGTAatgcaaagctaaaacagcaggtatttgaagcaaacatggagctgccgcgctacgggctggtgacctatacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggaggggatcaagcccagcggcgttacctacgaaaccatgaaagcggccgctatggtggtggttgatatgagcgacaaggtgggggaaggggagaatcgcccaacttccgacactgcc                   >  2:64717‑M1/3‑23 (MQ=255)
                                                                                                                                                                                                                                 aGCTGGTAAGATAATTTCGTAaggcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccatgaaagcggccgatatggtggtggttgatatgagcggcaaggtggtggaaggggagtatcgcccatcttccgacactgcgac                 <  2:434722‑M1/250‑230 (MQ=255)
                                                                                                                                                                                                                                 aGCTGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccatgaaagcggccgatatggtggtggttgatatgagcggcaaggtggtggaaggggagtatcgcccatcttccgacactgcgac                 <  1:39777‑M1/250‑230 (MQ=255)
                                                                                                                                                                                                                                    tGGTAAGATAATTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccatgaaagcggccgatatggtggtggttgatatgagcggcaaggtggaggacggggagtatcgcccatcttccgacactgcgacgca              >  2:244736‑M1/1‑18 (MQ=255)
                                                                                                                                                                                                                                              aTTACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccatgaaagcggccgatatggtggtggttgatatgagcggcaaggtggcggaaggggagtatcgcccatcttccgacactgcgacgcatctcgaactct   >  1:266813‑M1/1‑8 (MQ=255)
                                                                                                                                                                                                                                               ttACGTAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccatgaaagcggccgatatggtggtggttgatatgagcggcaaggtggtggaaggggagtatcgcccatcttccgacactgcgacgcatctcgaactct   >  1:219187‑M1/1‑7 (MQ=255)
                                                                                                                                                                                                                                                tccgtAatgcaaagctaaaacagcaggtatttgaagccaacatggagctgccgcgctacgggctggtgacctttacctggggcaacgtcagcgctatcgaccgcgaacgcgggctggtggtgatcaagcccagcggcgttgcctacgaaaccatgaaagcggccgatatggtggtggttgatatgagcggcaaggtggtggaaggggagtatcgcccatcttccgacactgcgacgcatctcgaactcta  <  2:404595‑M1/248‑245 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                    
GACCGGACGCCTGGCGCTGGTGATGGGTGCGGAAGGTGAAGGTATGCGTCGCCTGACTCGTGAACATTGCGATGAGTTGATCAGCATCCCGATGGCTGGAAGCGTTTCTTCCCTGAACGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGTGCGCCAGCGCAGCTAATTTCTCAGAATTATGAAAAGCCATCCAGATTTGGATGGTTTTTTTTTGTCTATAGCTGGTAAGATAATTACGTATTGCAAATATTCATTTTATTAATATTTAAACTTAATCTATATGGAATAATATATGACATGGAATCCGTTGGCGCTAGCGACGGCGCTGCAAACTGTACCTGAACAAAATATTGATGTAACAAATAGCGAGAACGCATTAATTATTAAAATGAATGATTATGGCGATTTGCAAATCAATATTCTTTTTACTTCCCGCCAAATGATTATCGAAACCTTTATTTGTCCGGTGAGTAGTATCAGCAAT  >  NC_000913/4409835‑4410324

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: