Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,086,996 Δ13,531 bp yiiGrhaT yiiG, frvR, frvX, frvB, frvA, rhaM, rhaD, rhaA, rhaB, rhaS, rhaR, rhaT

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4086996 4100526 13531 41 [0] [0] 40 yiiG–rhaT yiiG,frvR,frvX,frvB,frvA,rhaM,rhaD,rhaA,rhaB,rhaS,rhaR,rhaT

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 40869950 (0.000)40 (0.680) 37/492 0.3 100% intergenic (+146/‑7) fdhD/yiiG sulfurtransferase for molybdenum cofactor sulfuration/DUF3829 domain‑containing lipoprotein YiiG
?NC_000913 4100527 = 0 (0.000)intergenic (‑2/‑283) rhaT/sodA rhamnose/lyxose:H(+) symporter/superoxide dismutase (Mn)

CGCTTGCTGTAGAAGTGGCTGAGCGCTGTAATCTGACACTGGTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCAATTAAATGAAAAGGAATTTATTATCTTCCGCTATTATAGTCGCCATCATGTCCCTCGGTCTGACGGGTTGTGATGATAAAAAAGCCGAAACAGAAACGCTCCCGCCTGCCAATAGTCAACCTGCCGCACCAGCTCCTGAAGCGAAACCTACTGAAGCTCCCGTTGCAAAAGCAGAAGCTAAACCTGAAACACCTGCGCAACCGGTGGTCGATGAACAAGCGGTTTTCGACGAAAAAATGGATGTCTA  >  NC_000913/4086746‑4087243
                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                        
cGCTTGCTGTAGAAGTGGCTGAGCGCTGTAATCTGACACTGGTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCt                                                                                                                                                                                                                                                         >  2:239709‑M1/1‑250 (MQ=255)
     gCTGTAGAAGTGGATGAGCGCTGTAATCTGACACTTGTAGGTTGTGGTAAACCGGGTCGGGCTACTGTTTATCCCCATCCGTAGCGTTTGAGCAATTAATGAAAATAAGGCCTGAGAAATATTTGAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATTAACAATGTGCGTGTTGTGGCGTTTTCTTGTTTCATTGATTATGTTCTCTCCCTTATTTATATATTTATAAGGcttctta                                                                                                                                                                                                                                                    <  2:381702/251‑7 (MQ=255)
                    gAGCGCTGTAATCTGACACTGGTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttc                                                                                                                                                                                                                                     >  1:40009‑M1/1‑230 (MQ=255)
                      gcgcTGTAATCTGACACTGGTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgt                                                                                                                                                                                                                                   <  2:17572‑M1/251‑24 (MQ=255)
                                     cctGGTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccg                                                                                                                                                                                                                    <  2:76397‑M1/250‑39 (MQ=255)
                                        ggTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacg                                                                                                                                                                                                                 >  2:61542‑M1/1‑210 (MQ=255)
                                        ggTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccga                                                                                                                                                                                                                   <  1:274671‑M1/249‑40 (MQ=255)
                                        ggTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatcgccgac                                                                                                                                                                                                                  <  2:420381‑M1/250‑41 (MQ=255)
                                           aGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacg                                                                                                                                                                                                                 >  1:141313‑M1/1‑207 (MQ=255)
                                                     aaaCCGGGTCGGGTAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctacgatgagatgagtgtaa                                                                                                                                                                                                     >  2:19685‑M1/1‑197 (MQ=255)
                                                     aaaCCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAGATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagttgagtgtaa                                                                                                                                                                                                     >  2:209967‑M1/1‑197 (MQ=255)
                                                          gggTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcg                                                                                                                                                                                               <  2:270198‑M1/251‑60 (MQ=255)
                                                                      ggTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgatta                                                                                                                                                                                   <  1:398551‑M1/251‑72 (MQ=255)
                                                                      ggTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgatt                                                                                                                                                                                    >  1:283853‑M1/1‑180 (MQ=255)
                                                                               ccATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgc                                                                                                                                                                          >  1:151034‑M1/1‑171 (MQ=255)
                                                                                       aGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgcc                                                                                                                                                                  <  2:432593‑M1/251‑89 (MQ=255)
                                                                                       aGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTAGTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattagcctttcgcctgttgcc                                                                                                                                                                  <  2:103233‑M1/251‑89 (MQ=255)
                                                                                        gCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccg                                                                                                                                                                 >  1:217783‑M1/1‑162 (MQ=255)
                                                                                                 cAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcg                                                                                                                                                        <  1:158105‑M1/251‑99 (MQ=255)
                                                                                                          aaaaTAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactgg                                                                                                                                               <  1:79659‑M1/251‑108 (MQ=255)
                                                                                                           aaaTAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggc                                                                                                                                              >  2:448106‑M1/1‑143 (MQ=255)
                                                                                                               aaGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatc                                                                                                                                          <  1:332184‑M1/251‑113 (MQ=255)
                                                                                                                           atatatTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTTTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagt                                                                                                                              <  2:426729‑M1/251‑125 (MQ=255)
                                                                                                                           atatatTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagt                                                                                                                              <  2:217783‑M1/251‑125 (MQ=255)
                                                                                                                               atTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggt                                                                                                                          >  2:118577‑M1/1‑123 (MQ=255)
                                                                                                                                       gCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgtttccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgct                                                                                                                  <  2:456020‑M1/251‑137 (MQ=255)
                                                                                                                                                    aTTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggc                                                                                                     <  1:239709‑M1/251‑150 (MQ=255)
                                                                                                                                                            aaTTTTATTATTTTATTTATAAACAAAATGCGTGTAGTTGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcct                                                                                             <  1:41693‑M1/251‑158 (MQ=255)
                                                                                                                                                               tttattattttattTATACACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcctgc                                                                                           >  2:323645‑M1/1‑91 (MQ=255)
                                                                                                                                                                  attattttattTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTAGGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcctgcaaaa                                                                                       <  1:209967‑M1/251‑164 (MQ=255)
                                                                                                                                                                          atttatAAACAAAATGCGTTTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcctgcaaaaccatacc                                                                                <  2:40009‑M1/250‑171 (MQ=255)
                                                                                                                                                                                   aaaaatGCGTTTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcctgcaaaaccatacccttacgaaaa                                                                      <  2:334691‑M1/250‑181 (MQ=255)
                                                                                                                                                                                      aaTGCGGGTAGTGGCGTTTTCTTTTTTCATTTATTCTGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcctgcaaaaccctacccttacgaaaagt                                                                    >  2:16770‑M1/1‑68 (MQ=255)
                                                                                                                                                                                          cGTGTAGGGGCGTTTTCTTTTTTCATTTATTATGTTCACGCTCTTATCTATCTATTTATAGGGCttcttatgctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaaactttcgcctgttgccgccggtgtcgatttactgtcaatcacggaattcagtgggtaacttgcttcacatctcgggcattttcctgcaagaccatgcgcttacgaaacgtacggc                                                               >  2:57462‑M1/1‑64 (MQ=255)
                                                                                                                                                                                                   gCGTTTTTTTGTTTCATTAATTATGTTCTCTATCTTATCTATATATTTATAAGTCttcgtatccttgtcatttttcgtcgcgtcacatctccgacgagatgagtggaaaaatcgtgctgtcgattaacctttcgcctgttgtcgccgttgtcgatttactggcaatcacgggattaagtgggtgatttgcttcacatctcggtcattttcctgcaaaaccatccccttccgaaaaggacggcattgataat                                                      <  2:431078‑M1/251‑197 (MQ=255)
                                                                                                                                                                                                        ttCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcctgcaaaaccatacccttacgaaaagtacggcattgataatcattt                                                 >  2:76885‑M1/1‑50 (MQ=255)
                                                                                                                                                                                                                    ttattaTGTTCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcctgcaaaaccatacccttacgaaaagtacggcattgataatcattttcaatatcatt                                      <  1:448106‑M1/250‑213 (MQ=255)
                                                                                                                                                                                                                             tCACTCTCTTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcctgcaaaaccatacccttacgaaaagtacggcattgataatcattttcaatatcatttaattaact                             <  1:118577‑M1/250‑222 (MQ=255)
                                                                                                                                                                                                                                ctctctTATCTATATATTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcctgcaaaaccatacccttacgaaaagtacggcattgataatcattttcaatatcatttaattaactata                          >  2:453316‑M1/1‑26 (MQ=255)
                                                                                                                                                                                                                                           atatatTTATAAGGCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcctgcaaaaccatacccttacgaaaagtacggcattgataatcattttcaatatcatttaattaactataatgaaccaac                <  1:453316‑M1/249‑235 (MQ=255)
                                                                                                                                                                                                                                                       ggCttcttatcctcatcatttttcgtcgcgtcacatctccgacgagatgagtgtaaaaatcgtgctgtcgattaacctttcgcctgttgccgccgttgtcgatttactggcaatcacggcattaagtgggtgatttgcttcacatctcgggcattttcctgcaaaaccatacccttacgaaaagtacggcattgataatcattttcaatatcatttaattaactataatgaaccaactgcttacgcggcat  >  1:400973‑M1/1‑3 (MQ=255)
                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                        
CGCTTGCTGTAGAAGTGGCTGAGCGCTGTAATCTGACACTGGTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCGAAATATATTAAATTGCAGGACTTATTCATTTCGTGAATTTTATTATTTTATTTATAAACAAAATGCGTGTAGTGGCGTTTTCTTTTTTCATTTATTATGTTCACTCTCTTATCTATATATTTATAAGGCAATTAAATGAAAAGGAATTTATTATCTTCCGCTATTATAGTCGCCATCATGTCCCTCGGTCTGACGGGTTGTGATGATAAAAAAGCCGAAACAGAAACGCTCCCGCCTGCCAATAGTCAACCTGCCGCACCAGCTCCTGAAGCGAAACCTACTGAAGCTCCCGTTGCAAAAGCAGAAGCTAAACCTGAAACACCTGCGCAACCGGTGGTCGATGAACAAGCGGTTTTCGACGAAAAAATGGATGTCTA  >  NC_000913/4086746‑4087243

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: