| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,867,599 | Δ9,908 bp | yidQ–yidB | yidQ, yidR, cbrA, dgoT, dgoD, dgoA, dgoK, dgoR, yidX, yidA, yidB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3867599 | 3877506 | 9908 | 35 [0] | [0] 35 | yidQ–yidB | yidQ,yidR,cbrA,dgoT,dgoD,dgoA,dgoK,dgoR,yidX,yidA,yidB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3867598 | 0 (0.000) | 35 (0.590) | 32/494 | 0.5 | 100% | intergenic (‑176/‑130) | ibpA/yidQ | small heat shock protein IbpA/DUF1375 domain‑containing putative lipoprotein YidQ |
| ? | NC_000913 | 3877507 = | 0 (0.000) | intergenic (‑42/+198) | yidB/gyrB | DUF937 domain‑containing protein YidB/DNA gyrase subunit B | |||||
ATTCCAGTTGCTCGCCACTAACCGATTGATTGCCCTGTTGATTACTCAGCCAGGTTGAGAGAATGGCCCCTAAGCCGCCACTTTGCAGTTTTTCCAGCAGCACCTGAATGCCGCCCTGCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGC > NC_000913/3877264‑3877722 | agtggttaaacaaacggtcaaatccaatagcagaacggtaaagcggggataaatcaaagttacgcataatcaatagctcctgaaatcagcgagaatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTg > 1:92848‑M2/244‑251 (MQ=255) gtggttaaacaaacggtcaaatccaatagcagaacggtaaagcggggataaatcaaagttacgcataatcaatagctcctgaaatcagcgagaatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGc < 1:149533‑M2/9‑1 (MQ=255) gttaaacaaacggtcaaatccaatagcagaacggtaaagcggggataaatcaaagttacgcataatcaatagctcctgaaatcagcgagaatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgaaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCggg > 2:60910‑M2/240‑251 (MQ=255) caaacggtcaaatccaatagcagaacggtaaagcggggataaatcaaagttacgcataatcaatagctcctgaaatcagcgagaatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATa < 1:350185‑M2/18‑1 (MQ=255) caaacggtcaaatccaatagcagaacggtaaagcggggataaatcaaagttacgcataatcaatagctcctgaaatcagcgagaatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATa < 1:448585‑M2/18‑1 (MQ=255) acggtcaaatccaatagcagaacggtaaagcggggataaatcaaagttccgcataatcaatagctcgtgaaatcagcgagaatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctatgaggtaaaaatgggtctggaaatgaacttttcaagccttatcagcggacgttttttgtcagtttatggtctattgcatagGAGATTTGCGGGATGATAAtt < 2:133364‑M2/21‑1 (MQ=255) aaatccaatagcagaacggtaaagcggggataaatcaaagttacgcataatcaatagctcctgaaagcagcgagaatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGAt < 2:432843‑M2/27‑1 (MQ=255) atccaatagcagaacggtaaagcggggataaatcaaagttacgcataatcaatagctcctgaaatcagcgagaatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTg > 1:287056‑M2/223‑251 (MQ=255) ccaatagcagaacggtaaagcggggataaatcaaagttacgcataatcaatagctcctgaaatcagcgagaatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGc > 2:319542‑M2/221‑250 (MQ=255) agaacggtaaagcggggataaatcaaagttacgcataatcaatagctcctgaaatcagcgagaatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatcgTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATaa > 2:419132‑M2/213‑250 (MQ=255) ggtaaagcggggataaatcaaagttacgcataatcaatagctcctgaaatcagcgagaatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAggg > 1:446044‑M2/208‑251 (MQ=255) ataaatccaagttaagcataatcaatagctcctgaaatcagcgagaatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtactcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGTTAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGatcc > 2:403670‑M2/196‑250 (MQ=255) cctgaaatcagcgagaatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttagggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGAt < 1:385115‑M2/86‑1 (MQ=255) gagaatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTcc > 1:148272‑M2/154‑211 (MQ=255) gagaatgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTcc < 2:148272‑M2/58‑1 (MQ=255) atgtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCtt < 2:411098‑M2/102‑1 (MQ=255) gtaagaccttccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTa < 1:8414‑M2/103‑1 (MQ=255) ccacaatggacaggtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACa < 2:267499‑M2/114‑1 (MQ=255) gtcaggtagccagaacacccatcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAAt > 2:9862‑M2/125‑251 (MQ=255) cccatcaggcgcttcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttattgtctattgcatagTAGATTTGCTGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATTATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGAt < 1:402475‑M2/144‑1 (MQ=255) catcaggcgcgtcctcatcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGAttt < 2:290374‑M2/146‑1 (MQ=255) catcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATa < 1:9862‑M2/160‑1 (MQ=255) catcggctacgatgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTGCGTAGGCCTGATa < 2:446044‑M2/160‑1 (MQ=255) atgtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGGAGCGCAt > 2:158266‑M2/80‑251 (MQ=255) gtaaaaatgggtctggaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATc > 1:136955‑M2/78‑250 (MQ=255) gaaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATgg > 1:251612‑M2/63‑251 (MQ=255) aaatgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCCTGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGt > 1:364633‑M2/62‑251 (MQ=255) atgaacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTa < 2:136955‑M2/192‑1 (MQ=255) aacttttcaagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAAGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAgcg > 1:423263‑M2/57‑251 (MQ=255) caagccttatcagcggactttttttttcagtttatggtctattgcatagTAGCTTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAAGCAACCTCGCATGGTTAGCGCCATTa > 2:395771‑M2/50‑250 (MQ=255) aagccttatcagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACCCCTTATCCGCCCTACAAAATCATGAAAATTCAATACATTTCCAGCTTTTCGTTGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTaa > 1:344808‑M2/49‑250 (MQ=255) cagcggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGatat < 2:206810‑M2/212‑1 (MQ=255) cggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTcg < 2:189284‑M2/215‑1 (MQ=255) ggactttttttttcagtttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTcgc > 1:344570‑M2/36‑251 (MQ=255) ggactttttttataattttatggtctattgcatagTAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGAGCGGAGATGATCTCAGCCCTTTTCTTATAGCTTCTTGCCGGAGGCGGAGTGAACGCCTTATCCGGCCTACCAAATCATGAAAATTCAATACCTTGCAAGATTTTCTTAGGCCTAATAAACGTAACGCCTCAGGCACGCCCGCATGGTTAGCGCCATTGAATATCGATATTcgc > 2:384763‑M2/36‑251 (MQ=255) | ATTCCAGTTGCTCGCCACTAACCGATTGATTGCCCTGTTGATTACTCAGCCAGGTTGAGAGAATGGCCCCTAAGCCGCCACTTTGCAGTTTTTCCAGCAGCACCTGAATGCCGCCCTGCTCCTCAACCCAACTTAAAATAGCCTGATATTTCCCCGCATCGCCTTTCAGAAAGGCACCGACAACTTCATCAAAAAGCCCCATGATAATCACCTGTAAAGCGTTACGTGTTGACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGC > NC_000913/3877264‑3877722 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |