| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,370,266 | 0 | T | G | 27.5% | 127.3 / 14.2 | 69 | G83G (GGT→GGG) | arnD | putative 4‑deoxy‑4‑formamido‑L‑arabinose‑phosphoundecaprenol deformylase ArnD |
| Reads supporting (aligned to +/- strand): ref base T (15/35); new base G (19/0); total (34/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.01e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CCAAAGTAGGCTTACGCATTGATGTCGATACCTTTCGTGGCACCCGTGAAGGCGTGCCGCGTCTGCTGGAAATCTTGAGTAAGCATAATATTCAGGCCAGCATTTTTTTCAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGATATTGCACGCGGTCTTCGCACTCTGGAAGAGATTATCGGTCAACCGGTAACCTGTTCTGCCGCTGCGGGCTGGCGTGCCGACCAGAAGGTGATCGAAGCAAAAGAAGCGTTCC > NC_000913/2370022‑2370513 | ccAAAGTAGGCTTACGCATTGATGTCGATACCTTTCGTGGCACCCGTGAAGGCGTGCCGCGTCTGCTGGAAATCTTGAGTAAGCATAATATGCAGGCCAGCATTTTTTTCAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGTAAagag < 2:102278/251‑1 (MQ=255) cAAAGTAGGCTTACGCATTGATGTCGCTACCTTTCGTGGCACCCGTGAAGGCGTGCCGCGTCTGCTGGAAATCTTGAGTAAGCATAATATTCAGGCCAGCATTTTTT‑CAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGGACGGCCCGGCC‑AGGGAAagaggg > 1:217971/1‑249 (MQ=255) aaaGTAGGCTTACGCATTGATGTCGATACCTTTCGTGGCACCCGTGAAGGCGTGCCGCGTCTGCTGGAAATCTTGAGTAAGCATAATATTCAGGCCAGCATTTTTTTCAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGGACGGCCTTGCC‑AGGGAAagagg > 1:461351/1‑249 (MQ=255) aaaGTAGGCTTACGCATTGATGTCGATACCTTTCGTGGCACCCGTGAAGGCGTGCCGCGTCTGCTGGAAATCTTGAGTAAGCATAATATTCAGGCCAGCATTTTTTTCAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTAAGGCTGGGATATTTTACTGGCAGGTACGGCCCGGCC‑AGGGAAagag > 1:100153/1‑249 (MQ=255) aaGTAGGCTTACGCATTGATGTCGATACCTTTCGTGGCACCCGTGAAGGCGTGCCGCGTCTGCTGGAAATCTTGAGTAAGCATAATATTCAGGCCAGCATTTTTTTCAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACCGCCTGGGC‑CGGGAAAGAGAtt > 2:418913/1‑251 (MQ=255) ttACGCATTGATGTCGATACCTTTCGTGGCACCCGTGAAGGCGTGCCGCGTCTGCTGGAAATCTTGAGTAAGCATAATATTCAGGCCAGCATTTTTTTCAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGGAAAGAGATTTGTCATGc > 1:384204/1‑251 (MQ=255) gCATTGATGTCGATACCTTTCGTGGCACCCGTGAAGGCGTGCCGCGTCTGCTGGAAATCTTGAGTAAGCATAATATTCAGGCCAGCATTTTTTTCAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGGC‑AGGTAAAGGGGTTGGTCATGccca > 1:191515/1‑248 (MQ=255) tGATGTCGATACCTTTCGTGGCACCCGTGAAGGCGTGCCGCGTCTGCTGGAAATCTTGAGTAAGCATAATATTCAGGCCAGCATTTTTTTCAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGcc < 1:367894/250‑1 (MQ=255) cGATACCTTTCGTGGCACCCGTGAAGGCGTGCCGCGTCTGCTGGAAATCTTGAGTAAGCATAATATTCAGGCCAGCATTTTTTTCAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCCGGCC‑AGGGAAAGAGGATGGGCCTGCCCA‑TGCCGatattc > 1:332927/1‑249 (MQ=255) aCCTTTCGTGGCACCCGTGAAGGCGTGCCGCGTCTGCTGGAAATCTTGAGTAAGCATAATATTCAGGCCAGCATTTTTTTCAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑CGGGAAAGAGATTGGTCATGCCCA‑TGCCGATATCATTCg > 1:182028/1‑251 (MQ=255) ccTTTCGTGGCACCCGTGAAGGCGTGCCGCGTCTGCTGGAAATCTTGAGTAAGCATAATATTCAGGCCAGCATTTTTTTCAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGGACGGCCTGGCC‑AGGGAAAGAGATTGGTCATGCCAC‑AGCCGATATCAtttgt > 1:431659/1‑248 (MQ=255) tCGTGGCACCCGTGAAGGCGTGCCGCGTCTGCTGGAAATCTTGAGTAAGCATAATATCCAGGCCAGCATTTTTTTCAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCTTGaa < 1:499793/250‑1 (MQ=255) cGTGGCACCCGTGAAGGCGTGCCGCGTCTGCTGGAAATCTTGAGTAAGCATAATATTCAGGCCAGCATTTTTTTCAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGc < 1:287503/251‑1 (MQ=255) cGTGGCACCCGTGAAGGCGTGCCGCGTCTGCTGGAAATCTTGAGTAAGCATAATATTCAGGCCAGCATTTTTTTCAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGGCATGCCAA‑TGCCGTTATCATTCTTGa > 1:34661/1‑248 (MQ=255) gCCGCGTCTGCTGGAAATCTTGAGTAAGCATAATATTCAGGCCAGCATTTTTTTCAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTc < 1:131240/250‑1 (MQ=255) ccGCGTCTGCTGGAAATCTTGAGTAAGCATAATATTCAGGCCAGCATTTTTTTCAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCgg < 1:266631/251‑1 (MQ=255) ggAAATCTTGAGTAAGCATAATATTCAGGCCAGCATTTTTTTCAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑CGGGAAAAAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCCAAACAACAAGAAGGCGGCCTG‑ccagccc > 1:199914/1‑245 (MQ=255) cTTGAGTAAGCATAATATTCAGGCCAGCATTTTTTTCAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACCGACTGGGC‑CGGGAAAGAAAATTGTGATTCCAAATGCC‑ATATCATTTCTGGAGC‑AGCTAAAAATCACGAAGACGGGCTG‑CACGccctgggtc > 2:49038/1‑244 (MQ=255) aGTAAGCATAATATTCAGGCCAGCATTTTTTTCAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGGACGGCCCGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTTGTGGAGC‑GGCTAAACATCACGAAGTCGGCCCG‑CACGCCCGGGATCAcc > 1:293506/1‑250 (MQ=255) gTAAGCATAATATTCAGGCCAGCATTTTTTTCAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCAt < 2:235955/251‑1 (MQ=255) aGCATAATATTCAGGCCAGCATTTTTTTCAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGGACGGCCCGGCC‑CGGGAAAGAGAATGGTCATGCCCA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCCG‑CACGCCCGGGGTCACCCTGcc > 1:42862/1‑251 (MQ=255) cATAATATTCAGGCCAGCATTTTTTTCAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTg < 1:106123/251‑1 (MQ=255) ataataTTCAGGCCAGCATTTTTTTCAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGGC‑AGGTAAAGAGATTTGTCATTCCAA‑TGCCGGTATCATTCGTGAAGC‑GGCTAAAAATCACGAAATCGGCCTT‑CACGCCCGGGAGCCCCATGCCtcg > 1:169729/1‑249 (MQ=255) ccatcATTTTTTTCAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCGGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCATGGCAAGCCCGTAGc < 2:103263/247‑1 (MQ=255) agccttgttttCAGCGTCGGCCCCGACAATATGTGTCGCATTCGCTGGAGACGTGTGAATCCACAGTTTGGGTGGAAGATGTTGTGCTCAAACGCGGACTCTCTTGATGGCTTTGATATTTTACGGGCAGGTTCGGCTGGGCC‑GGGTGAAGAGATTGGTCATGCCAT‑TGCCGGTCGCATTCGTGAAGC‑GTCTACACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGTCTGGCaatgtcgtagcgg < 2:283317/244‑12 (MQ=255) tttttttCAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCTTGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCCAGAAGTCGGCCTG‑CACGCCTGGGGTCACCATGCCTGGCAAGCCCGTAGCGGGAAc > 1:261065/1‑251 (MQ=255) tttttCAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACt < 2:42862/250‑1 (MQ=255) tacagcatcgcccctgaaaagagtggCCGCCATCTCGGGCGAATGGAGAAGCCACAGTTTTTTGGGAAGACGCTGTGCTCAAACGCGGCATCGCTTTATGGCTGGGATATGTTACTGGCAGGTCCGGCCTGGCT‑GGGTAAAGAGATGGGTCATGCCAA‑GGCCGATATCAGTCGTGACGC‑GGCTAACCATCACTAAGTCGGCCTG‑CTCGCCTGTGATCAGCATGCGTGTCAAGCCCGTATCGGTAACTggg < 2:249759/226‑1 (MQ=255) cAGCGTCGGCCGGGACAATATTGGCCTCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCGCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCTAGACCGTAGCGGTAACTGGGATc < 2:201265/251‑1 (MQ=255) cAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGGACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGGCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGGAACTggggtc > 1:44334/1‑248 (MQ=255) gTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑CGGTAAAGAGATTGGTCATGCCCA‑TGCCGATATCCTTCGTGGAGC‑GGCTCAACATCACGAAGTCGGCCTG‑CACGCCCGGGAGCCCCATGCCTGGCAAACCCCTAGCGGGAACTGGGATCGGcc > 1:44284/1‑250 (MQ=255) ggCCCGGCAAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAATAGCGGTATCACTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTT‑CACGCCTGGGATCTCCATGCCTGGCAAGTGCGTAGCGGTAGCTGGGATCGGCAAAc < 2:463339/251‑1 (MQ=255) ggCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGGAAAGAGATTTGTCATGCCAA‑TGCCGATATCATTTGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGGTCACCATGCCTGGCCAGCCCGGAGCGGGAACTGGGATCGGCaaa > 1:460993/1‑250 (MQ=255) cAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATcg < 1:363422/251‑1 (MQ=255) atGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATcgacga < 2:44284/251‑1 (MQ=255) gggCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACGGGGATCGGCAAACAATGATCGACGata < 1:161164/251‑1 (MQ=255) ggCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGGAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGatat > 1:260339/1‑251 (MQ=255) gccgccATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGATAtt < 1:858/251‑1 (MQ=255) gCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGATATTGCACGCTGTCTTc < 2:471044/251‑1 (MQ=255) ggTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGGAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAAAATCACGAAGTCGGCCTG‑CCCGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGGAACTGGGATCGGCAAACAATGATCGACGATATTGCACGCGGTCTTCGCActc > 1:209341/1‑251 (MQ=255) aaGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGGACGGCCTGGCC‑AGGGAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGGCTT‑CACGCCTGGGGTTACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGGAAACAAAGATCGACGATATTTCACGCGGTCTTCGCACTCTggg > 1:224308/1‑250 (MQ=255) aaGCCACAGATTTAGTGGAAGATGCTGCGCTCAAACGCTGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTCCGGCCCGGCC‑CAGTAAAGAGAATTGTCATGCCCA‑AGCCCATATCAATCGGTAAGG‑TGGGAAACAACCCGAAGGCGGGCTG‑CAAGCCTTGGATCACCAAGCACGGCCACGCCGTTGCGGGCAAAGGGATAGGTAAAAAATGATCGACGATATTTCACGCGGTCTTCCCActacggg > 2:273129/1‑246 (MQ=255) tttGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGGTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGATATTGCACGCGGTCTTCGCACTCTGGAAGAGATTATc < 2:332927/250‑1 (MQ=255) gAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGATATTGCACGCGGTCTTCGCACTCTGGAAGAGATTATCGGTCAAc < 1:498581/251‑1 (MQ=255) gctgcGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGATATTGCACGCGGTCTTCGCACTCTGGAAGAGATTATCGGTCAACCGGTa < 1:104641/250‑1 (MQ=255) gcgcTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGATATTGCACGCGGTCTTCGCACTCTGGAAGAGATTATCGGTCAACCGGTAACCt > 1:370308/1‑251 (MQ=255) gcTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGGACGGCCTGGCC‑AGGGAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGGTCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGATATTGCACGCGGTCTTCGCACTCTGGAAGAGATTATCGGTCAACCGGTAACCTGt > 1:361391/1‑251 (MQ=255) cgcgGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACTGCCTGGGC‑AGGGAAAGAGATTTGTCATGCCCA‑TGCCGCTATCCTTCGTTAAGC‑CGCTAAACATCACGAAGTCGGCCTG‑CACGCCCGGGATCACCCTGCCTGGCCAGCCCGTAGCGGTAACTGTGATCGGCAAACCATGATCGACGATATTTCCCGCGGTCTTCACCCTCTGGAAGAAATTATCAGTCCACCGGTAACCTGTTCTGccc > 1:70362/1‑250 (MQ=255) ggCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCCGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCCGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGATATTGCACGCGGTCTTCGCACTCTGGAAGAGATTATCGGTCAACCGGGAACCTGTTCTGCCGCTg > 1:82684/1‑251 (MQ=255) aTCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGATATTGCACGCGGTCTTCGCACTCTGGAAGAGATTATCGGTCAACCGGTAACCTGTTCTGCCGCTGCgg < 1:250880/251‑1 (MQ=255) gCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCCCAGGTAA‑GAGGGTGGGTATTCCAA‑CGTCGATATCATTCCTGAAGCCGGCAAAAAACAACGA‑GACGGCCTGACACCCCCGGGACAACCATACCTGCCAACCCCGT‑GCGGCAACTGGGAACCGCAAACAAAGAACGACGAAATTTCAAGCGCGCTTCGCGCCCTGTGAGAGATTATCGGGCAACCGGTagcacggtctacctgtgcggggc > 2:189023/1‑229 (MQ=255) tttATGGCTGGGATATTTTACTGGCAGGTAAGGCCTGGCC‑CGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCCGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGATATTGCACGCGGTCTTCGCACTCTGGAAGAGATTATTGGTCAACCGGGAAACTGTTCTGCCGCTGCGGGCTgg > 1:208470/1‑251 (MQ=255) aTGGCTGGTATATTGTACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGATATTGCACGCGGTCGTCGCGCTCTGGAAGAGATTGTCGGTCAACCGGTAACCTGTTCTGCCGCGGCGGGCTGGCg < 2:91279/250‑1 (MQ=255) gggCTGGGATATTTTACTGGCAGGTACGGCCTGGCT‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGATATTGCACGCGGTCTTCGCACTCTGGAAGAGATTATCGGTCAACCGGTAACCTGTTCTGCCGCTGCGGGCTGGCGTg < 2:74214/250‑1 (MQ=255) gCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGATATTGCACGCGGTCTTCGCACTCTGGAAGAGATTATCGGTCAACCGGTAACCTGTTCTGCCGCTGCGGGCTGGCGTGcc < 1:418913/251‑1 (MQ=255) gggATATTTTACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACa < 2:76172/158‑1 (MQ=255) gggATATTTTACTGGCAGGTACGGCCTGGCC‑AGGGAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACa > 1:76172/1‑158 (MQ=255) gggATATTGTACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGATATTGCACGCGGTCTTCGCCCTCTGGAAGAGATTATCGGTCAACCGGTAACCTGTTCTGCCGCTGCGGGCTGGCGTGCCGaa < 2:100153/251‑2 (MQ=255) gATATTTTACTGGCAGGTACGGCCTGGCC‑AGGGAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGATATTGCACGCGGTCTTCGCACTCTGGAAGAGATTATCGGTCAACCGGTAACCTGTTCTGCCGCTGCGGGCTGGCGTGCCGAccc > 1:405366/1‑250 (MQ=255) tACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGATATTGCACGCGGTCTTCGCACTCTGGAAGAGATTATCGGTCAACCGGTACCCTGTTCTGCCGCTGCGGGCTGGCGTGCCGACCAGAAGGt < 2:199914/250‑1 (MQ=255) aCTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGATATTGCACGCGGTCTTCGCACTCTGGAAGAGATTATCGGTCAACCGGTAACCTGTTCTGCCGCTGCGGGCTGGCGTGCCGACCAGAAGGTGa < 1:490073/251‑1 (MQ=255) ggCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGATATTGCACGCGGTCTTCGCACTCTGGAAGAGATTATCGGTCACCCGGTAACCTGTTCTGCCGCTGCGGGCTGGCGTGCCGACCAGAAGGTGATCg > 1:212421/1‑251 (MQ=255) ggCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGATATTGCACGCGGTCTTCGCACTCTGGAAGAGATTATCGGTCAACCGGTAACCTGTTCTGCCGCTGCGGGCTGGCGTGCCGACCAGAAGGTGATCg > 1:471854/1‑251 (MQ=255) ggTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGATATTGCACGCGGTCTTCGCACTCTGGAAGAGATTATCGGTCAACCGGTAACCTGTTCTGCCGCTGCGGGCTGGCGTGCCGACCAGAAGGTGATCGAAGc < 2:44334/251‑1 (MQ=255) cGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGATATTGCACGCGGTCTTCGCACTCTGGAAGAGATTATCGGTCAACCGGTAACCTGTTCTGCCGCTGCGGGCTGGCGTGCCGACCAGAAGGTGATCGAAGCaaaa < 1:191988/251‑1 (MQ=255) ccTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGATATTGCACGCGGTCTTCGCACTCTGGAAGAGATTATCGGTCAACCGGTAACCTGTTCTGCCGCTGCGGGCTGGCGTGCCGACCAGAAGGTGATCGAAGCAAaagaa < 1:173257/251‑1 (MQ=255) cTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGATATTGCACGCGGTCTTCGCACTCTGGAAGAGATTATCGGTCAACCGGTAACCTGTTCTGCCGCTGCGGGCTGGCGTGCCGACCAGAAGGTGATCGAAGCAAaaga > 1:4642/1‑249 (MQ=255) ggCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGATATTGCACGCGGTCTTCGCACTCTGGAAGAGATTATCGGTCAACCGGTAACCTGTTCTGCCGCTGCGGGCTGGCGTGCCGACCAGAAGGTGATCGAAGCAAaagaag < 1:308678/249‑1 (MQ=255) aGGTAAAGAGAGTGGTCATGCCAA‑TGCCGATATCATGCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGGCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGATATTGCACGCGGTCTTCGCACTCTGGAAGAGATTATCGGTCAACCGGTAACCTGTTCTGCCGCTGCGGGCGGGCGTGCCGACCAGAAGGTGATCGAAGCAAAAGAAGCGTTcc < 2:142026/251‑1 (MQ=255) | CCAAAGTAGGCTTACGCATTGATGTCGATACCTTTCGTGGCACCCGTGAAGGCGTGCCGCGTCTGCTGGAAATCTTGAGTAAGCATAATATTCAGGCCAGCATTTTTTTCAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCC‑AGGTAAAGAGATTGGTCATGCCAA‑TGCCGATATCATTCGTGAAGC‑GGCTAAACATCACGAAGTCGGCCTG‑CACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGATATTGCACGCGGTCTTCGCACTCTGGAAGAGATTATCGGTCAACCGGTAACCTGTTCTGCCGCTGCGGGCTGGCGTGCCGACCAGAAGGTGATCGAAGCAAAAGAAGCGTTCC > NC_000913/2370022‑2370513 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |