| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,756,159 | Δ33,804 bp | [intA]–[glaH] | 28 genes [intA], yfjH, alpA, yfjI, yfjJ, abpB, abpA, yfjM, rnlA, rnlB, yfjP, yfjQ, yfjR, ypjK, yfjS, yfjT, yfjU, yfjW, yfjX, yfjY, ypjJ, yfjZ, ypjF, ypjA, ypjB, ypjC, ileY, [glaH] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2756159 | 2789962 | 33804 | 59 [0] | [0] 59 | [intA]–[glaH] | [intA],yfjH,alpA,yfjI,yfjJ,abpB,abpA,yfjM,rnlA,rnlB,yfjP,yfjQ,yfjR,ypjK,yfjS,yfjT,yfjU,yfjW,yfjX,yfjY,ypjJ,yfjZ,ypjF,ypjA,ypjB,ypjC,ileY,[glaH] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2756158 | 0 (0.000) | 59 (0.960) | 52/494 | 0.1 | 100% | intergenic (+203/‑1) | ssrA/intA | tmRNA/integrase IntA |
| ? | NC_000913 | 2789963 = | 0 (0.000) | intergenic (+1/‑19) | glaH/lhgD | glutarate dioxygenase GlaH/L‑2‑hydroxyglutarate dehydrogenase | |||||
GACCAGTTCGTCCAGCCGAAAGACTTCGAAGAAGGCGTGTGGTTGAGCGAGCTTTCCGACGCCATTGAAACCAGCAAAGGCATTCTTTCTGTGCCCGTTCCCGTTGGCAAATTCCTGTTGATTAACAACCTGTTCTGGCTGCACGGTCGCGACCGCTTTACTCCGCACCCGGATCTGCGCCGTGAACTGATGCGCCAGCGTGGCTATTTCGCTTACGCCTCTAACCACTACCAGACGCATCAGTAAGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGCCACCAAAGC > NC_000913/2789717‑2790205 | gtaggaatttcggaagcgggtgcaacgcccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccgcgc < 1:9059‑M2/4‑1 (MQ=255)gaagaaatttcggacgcgtgttcaacccccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccgcgc < 2:489594‑M2/4‑1 (MQ=255) taggaatttcggacgcgggttcaactcccgccagctccacccaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttccgttgggcctaaacgaagggagactccccGCGC‑a > 1:320745‑M2/246‑250 (MQ=255) ggaatttcggacgcgggttcaactcccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAg < 1:224865‑M2/8‑1 (MQ=255) atttcggacgcgggttcaactcccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGa > 1:290954‑M2/241‑250 (MQ=255) ggacgcgggttcaactcccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTg > 1:114079‑M2/236‑249 (MQ=255) gacgcgggttcaactcccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGc < 1:60416‑M2/17‑1 (MQ=255) gcgggttcaactcccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCgg > 1:445434‑M2/232‑250 (MQ=255) ctcccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaaagcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGAttt > 2:156820‑M2/222‑251 (MQ=255) cgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTtgtg < 1:58254‑M2/34‑1 (MQ=255) ccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTgg < 2:114079‑M2/42‑1 (MQ=255) aactctccatcggtgattaccagagtcatccgatgaagtccgaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgacccttttttccccatttttttgcccttcgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTggcggcggc < 1:494412‑M2/49‑1 (MQ=255) ctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGcatc > 1:421327‑M2/199‑250 (MQ=255) ccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcaggacgactccccGCGC‑CCAGGAATTGATCGGATGTATGCTTTTGTGCTTATTGGCGGCGGCatcatc > 2:57046‑M2/197‑251 (MQ=255) gattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgctggcttttttgtgccctcaatttgtcccgcgaagtccgaagaaaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTc < 2:333731‑M2/63‑1 (MQ=255) accagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGAcc < 1:47255‑M2/67‑1 (MQ=255) accagaggcatccgatggaggcctaagagcccgcacggcgcgagccaggcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaagccgaaccttttaggcccatggataggaccaacgaaaagctctagggtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATAGAGCGGAGGTATGATTTTTTGATTATTGGCGGCGGCATCATCGGCATGTCGAcc < 2:201974‑M2/67‑1 (MQ=255) ccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCg > 1:305043‑M2/184‑251 (MQ=255) cctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGACTTGAGCGGCTGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGGCCGCCATGCAACTGATTGATGt > 1:252919‑M2/164‑250 (MQ=255) taagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCt > 1:76439‑M2/162‑250 (MQ=255) cgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagacgccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACg < 2:471825‑M2/98‑1 (MQ=255) cacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGcc < 1:134393‑M2/100‑1 (MQ=255) aagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGc > 1:505259‑M2/144‑251 (MQ=255) gcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTg > 1:424131‑M2/137‑251 (MQ=255) tttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGaaaa > 1:65972‑M2/130‑249 (MQ=255) caatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCg < 2:94776‑M2/133‑1 (MQ=255) caattggtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCg < 2:222730‑M2/133‑1 (MQ=255) gaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAACAAGAGTCCGCCCCGGCCTGTCACCAGAc > 1:137841‑M2/105‑251 (MQ=255) tccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGACTTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGCCCGCCATGCAACTGATTGATGTCTATTCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCCCCAGAcgggg > 2:158826‑M2/101‑250 (MQ=255) gagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCacaac < 1:385115‑M2/157‑1 (MQ=255) gagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagatctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGAATATTGGCAGCGGCATCATCGGCATGGCGACCGCCACGCAACTGATTTGTGTCTATACGGACGCCCGCAGTGCGTTGCTGGAAAAACAGGCCGCCCCGGCCTGGCAACAGACGGGCCccaac > 2:286874‑M2/95‑251 (MQ=255) ctaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAgcgg > 1:487281‑M2/90‑251 (MQ=255) taaatccgaaccttttaggcccattgatagacccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTg > 1:364919‑M2/85‑250 (MQ=255) atccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATcc > 1:17075‑M2/82‑251 (MQ=255) accttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCCCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGCAAAAGAGTCCGCCCCGGCCTGTCACCCGACGGGACACAACCGCGGCGTTATCCATGCCg > 2:72688‑M2/76‑251 (MQ=255) ggtaggcccaacgaaatgcgcttttgtttacgttgggcctaaccgcagggagactccccGCGC‑AAAGGAATGTAGGGTAGGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGCCGACCGCAAGGCAACGGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACAAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACacgtc < 2:241358‑M2/192‑3 (MQ=255) ataggcccaacgaaaagcgctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGCCCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTAcacgtcc < 1:429340‑M2/193‑4 (MQ=255) taggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCg > 1:377439‑M2/58‑251 (MQ=255) taggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGGCTATCCGGAAGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGGGATCCATGCCGGGGTCTATTacacgtccc > 2:506014‑M2/58‑247 (MQ=255) cccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTTTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAg < 1:152807‑M2/198‑1 (MQ=255) acgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGGGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGCCGTGATCCAGGCCGGGGCCTATTACACGTCCGGCagcccg > 2:315147‑M2/50‑249 (MQ=255) gaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTCTGATTTTGTGATTATTGGCGGCGGCATCATCGGAATGTCGACCGCCCTGCAAATGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGGACGCCCCGGCCTGCCACCAGACGGGCCACAACAGCGGCGTGATCCATACCGgggtctattacacgtaccgcagcccga > 2:177350‑M2/48‑237 (MQ=255) gaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGGTTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGa > 1:13978‑M2/48‑250 (MQ=255) agctctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGGCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGGCACCCGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGGCTCTTACACGTCCGGCAGCCTGAAGgcg > 2:79574‑M2/44‑251 (MQ=255) tctattgtttacgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGgcgc > 1:184601‑M2/41‑249 (MQ=255) acgttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGTATGTATGATTTTTTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTg < 1:244634‑M2/220‑1 (MQ=255) gttgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCg > 1:318098‑M2/29‑251 (MQ=255) tgggcctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCCTCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACCCGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCggg > 2:234455‑M2/27‑251 (MQ=255) cctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAAc > 1:349190‑M2/23‑251 (MQ=255) ctaaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAAcc > 1:283279‑M2/22‑251 (MQ=255) taaacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACcg > 1:224432‑M2/21‑251 (MQ=255) aacgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACcgcg > 1:53402‑M2/19‑251 (MQ=255) acgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCgcgc > 1:246177‑M2/18‑251 (MQ=255) acgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGCCATGGCGCCCGCCATGCAACGGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGGCCGCCCCGGCCTTTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACTCGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCgcgc < 1:156820‑M2/234‑1 (MQ=255) cgcagggagactccccGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGcc < 1:218579‑M2/235‑1 (MQ=255) gcggggagcctccccG‑GCAAAAGGAATTGGGGGGGTGTATGATTTTGTGATTATTGGCGGCGGCATCAGCGGCATGTCGACCGCCATGCAACTGATGGATGTCTATCCGGACGCCCGCATTGCGTTGCGGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGcca < 2:44318‑M2/236‑1 (MQ=255) agggagactcccaGCGC‑AAAGGAATTGAGCGGAGTTAGTATTTTGGGATTATTGGCGGCGGCATCATCGGCATGTCTACTACCATGCAACTGATTGATGGCTATCCGGCCGCCCGCATTGCGTTGCTGGAAAAAAAGGCCGCCCCGGCCTGTCACCAGGCGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGccacc < 2:431113‑M2/238‑1 (MQ=255) gggagactcccgGCGC‑AAAGGAATTGAGCGGTTTTATGATTTTGTGATTATGGGCGGCGGCATAATCGGCGTGTCGACCGCCATGCAACGGTTTGAGTTCTATCCGGACGCCGGCATTGCGTGGCTGGAAAAAGAGTCCTCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGccacca < 2:65972‑M2/239‑1 (MQ=255) gactccccGCGC‑AAAGGAATTGAGCGGATGTATGCTTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACCGCGGCGTGATCCATGCCGGGGTCTATTACCAGTCAGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGGGCCAccaaacc > 2:489338‑M2/9‑249 (MQ=255) | GACCAGTTCGTCCAGCCGAAAGACTTCGAAGAAGGCGTGTGGTTGAGCGAGCTTTCCGACGCCATTGAAACCAGCAAAGGCATTCTTTCTGTGCCCGTTCCCGTTGGCAAATTCCTGTTGATTAACAACCTGTTCTGGCTGCACGGTCGCGACCGCTTTACTCCGCACCCGGATCTGCGCCGTGAACTGATGCGCCAGCGTGGCTATTTCGCTTACGCCTCTAACCACTACCAGACGCATCAGTAAGCGC‑AAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGCCACCAAAGC > NC_000913/2789717‑2790205 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |