| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 728,735 | Δ10,773 bp | [kdpF]–[phr] | [kdpF], ybfA, rhsC, ybfB, ybfC, ybfQ, ybfD, [ybgA], [phr] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 728735 | 739507 | 10773 | 78 [1] | [0] 77 | [kdpF]–[phr] | [kdpF],ybfA,rhsC,ybfB,ybfC,ybfQ,ybfD,[ybgA],[phr] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 728734 | 1 (0.020) | 77 (1.260) | 70/492 | 0.0 | 99.4% | coding (88/90 nt) | kdpF | K(+) transporting P‑type ATPase subunit KdpF |
| ? | NC_000913 | 739508 = | 0 (0.000) | coding (508/510 nt) coding (2/1419 nt) |
ybgA phr |
DUF1722 domain‑containing protein YbgA deoxyribodipyrimidine photolyase |
|||||
ATCACACCAATGTTTTGATGCACGTTCAGGGTTATTTTCGCCCGCATATTGATTCCACAGAACGCCAGCAGCTGGCTGCGCTTATCGACAGTTATCGCCGTGGCGAGCAACCACTTCTTGCGCCGCTGATGCGTATCAAACACTATATGGCGCTTTATCCTGACGCCTGGCTTTCAGGGCAGCGTTATTTCGAACTTTGGCCGCGTGTGATTAACTTGCGCCATTCAGGAGTTTTATGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTG > NC_000913/739272‑739750 | aaacagcaccgccagccccagcatgttcaggccgagaatggcacaaagatattgcttccagttcatctcacggtcagagacgccaagtgcgcgaaaaagtacgcgctcaacgcccgttgtaccgggaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagccccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCAtctgg > 1:405468‑M2/237‑251 (MQ=255) gcaccgccagccccagcatgttcaggccgagaatggcacaaagatattgcttccagttcatctcacggtcagagacgccaagtgcgcgaaaaagtacgcgctcaacgcccgttgtaccgggaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCAtctggtctgg > 1:59512‑M2/232‑251 (MQ=255) caccgccagccccagcatgttcaggccgagaatggcacaaagatattgcttccagttcatctcacggtcagagacgccaagtgcgcgaaaaagtacgcgctcaacgcccgttgtaccgggaagaggcatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgctcagtaagaacccttgcgcagccatcaTGACTACCCCTctggtctggt > 2:120911‑M2/231‑251 (MQ=255) ccgccagccccagcatgttcaggacgagaatggcacaaagatattgcttccagttcatctcacggtcagagacgccaagtgcgcgaaaaagtacgcgctcaacccccgttgtaccgggaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGttt < 1:452008‑M2/23‑1 (MQ=255) catgtgtagtccgagactggcacaaagatattgattccagtgcatctcactggcagagacgccaagtgcgcgaaaaagtacgcgctcaacgcccgttgtaccgggaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaactccagtaaaaacgtggcgatcagtaagaacccgtgcgcagccatcaTGACTACCCATCTGGGCTGGTTTCGCCAGGATTTAc < 2:419941‑M2/36‑1 (MQ=255) atgttcaggccgagaatggcacaaagatattgcttccagttcatctcacggtcagagacgccaagtgcgcgaaaaagtacgcgctcaacgcccgttgtaccgggaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACg > 1:407995‑M2/215‑251 (MQ=255) tcaggccgagaatggcacaaagatattgcttccagttcatctcacggtcagagacgccaagtgcgcgaaaaagtacgcgctcaacgcccgttgtaccgggaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTg > 1:450526‑M2/211‑251 (MQ=255) gaatggcacaaagatattgcttccagttcatctcacggtcagagacgccaagtgcgcgaaaaagtacgcgctcaacgcccgttgtaccgggaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAAt < 2:171649‑M2/50‑1 (MQ=255) gaatggcacaaagatattgcttccagttcatctcacggtcagagacgccaagtgcgcgaaaaagtacgcgctcaacgcccgttgtaccgggaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAAt > 1:319935‑M2/202‑251 (MQ=255) atggcacaaagatattgcttccagttcatctcacggtcagagacgccaagtgcgcgaaaaagtacgcgctcaacgcccgttgtaccgggaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAAtct > 2:9428‑M2/200‑251 (MQ=255) ggcacaaagatattgcttccagttcatctcacggtcagagacgccaagtgcgcgaaaaagtacgcgctcaacgcccgttgtaccgggaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAAtctc < 1:280610‑M2/53‑1 (MQ=255) ggcacaaagatattgcttccagttcatctcacggtcagagacgccaagtgcgcgaaaaagtacgcgctcaacacccgttgtaccgggaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCg < 1:326901‑M2/54‑1 (MQ=255) cataaagatattgcttccagttcatctcacggtcagagacgccaagtgcgcgaaaaagtacgcgctcaacgcccgttgtaccgggaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTGTCGCCAGGATTTACGTCTGCACGATAATCTCGCa < 2:278073‑M2/56‑1 (MQ=255) acaaagatattggttccaggtcatctcacggtcagagaagccaagtgcgcgaaaaagtacgcgctcaactcccgttttaccgggaagaggaatgtcattaatcatccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCAc < 2:480799‑M2/57‑1 (MQ=255) aaaagatattgcttccagttcatctcacggtcagagacgccaagtgcgcgaaaaagtacgcgctcaacgcccgttttaccgggaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACt < 2:450526‑M2/58‑1 (MQ=255) aagatattgcttccagttcatctcacggtcagagacgccaagtgcgcgaaaaagtacgcgctcaacgcccgttgtaccgggaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTgg < 1:127044‑M2/60‑1 (MQ=255) gcttccagttcatctcacggtcagagacgccaagggcgcgaaaaagtacgcgctcaacgcccgttgtaccgggaagaggaatgtaattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacggggcgatcagtaggaacccttgcgcagccatcaTGACTACCCATCTGGTATGGTTTCGCCAGGATTTACGTCGGCACAGTAATCTCGCACTGGctgccgcc > 1:446029‑M2/184‑251 (MQ=255) ttccagttcatctcacggtcagagacgccaagtgcgcgaaaaagtacgcgctcaacgcccgttgtaccgggaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGctgccgcctg > 1:302290‑M2/182‑251 (MQ=255) tccagttcatctcacggtcagagacgccaagtgcgcgaaaaagtacgcgctcaacgcccgttgtaccgggaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGctgccgcctg < 1:208381‑M2/70‑1 (MQ=255) ccagttcatatcacggtcagagacgccaagtgcgcgaaaaagtacgcgctccacgcccgttgtaccgggaagatgaatgtcattaatcagccgcggcagcccgctgcctaaaggacgcgccagcgccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCACCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGctgtcgcctgcc < 2:20340‑M2/72‑1 (MQ=255) cagttcatctcacggtcagagacgccaagtgcgcgaaaaagtacgcgctcaacgcccgttgtaccgggaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGctgccgcctgccg > 1:190687‑M2/179‑251 (MQ=255) tcatctcacggtcagagacgccaagtgcgcgaaaaagtacgcgctcaccgcccgttgtaccgggaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAAt > 2:75692‑M2/175‑251 (MQ=255) catctcacggtcagagacgccaagtgcgcgaaaaagtacgcgcccaccgcccgttgtaccgggaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAAt < 2:316750‑M2/77‑1 (MQ=255) cccggtcagagatgccaagtgcgcgaaaaagttcgcgctcaacgcccgttgtaccgggaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagatcccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTc < 2:431553‑M2/79‑1 (MQ=255) acggtcagagacgccaagtgcgcgaaaaagtacgagctcaacgcccgttgtacagggaagaggaatgtccttactcagacgcgacagcccgctgactaaaggacgcgccagcaccattaacaccagtcaaaacgtggcgctcagaaagaacccttgcgcagcaatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATATCGCACTGGCTGCCGCCTGCAGCAATTCGTCTg > 2:384060‑M2/168‑251 (MQ=255) aagagacgccaagtgcgcgaaaaagtacgcgctcaacgcccgttgtaccgggaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGCCTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCGGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCAcgc > 2:100505‑M2/163‑251 (MQ=255) caattgcgcgaaacagtacgcgctccaagcccgttgtaccgggaagaggaatgtaattaatcagccgcgcccgcccgcggccgaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgagcagtaagaacccttgcgcagccatcaTGACTACCCATCTGTTCTGGTATCGCCGGGCTTTACTACTGCACGATAATCTCGCACTGGCTTCCGCCTGCCGCAATTCGTCTGCACGCGTGCGGGCg > 2:274698‑M2/154‑251 (MQ=255) agtgcgcgaaaaagtacgcgctcaacgcccgttgtaccgggaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGtt > 1:58460‑M2/152‑251 (MQ=255) gtgcgcgaaaaagtacgcgctcaacgcccgttgtaccgggaagaggaatgtcattaatcagccgcaccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgttcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCCCGATAATCTCGCACTGGCTGCCGCCTGCCGCCATTCGTCTGCACGCGTGCTggcgatg > 2:469462‑M2/151‑248 (MQ=255) cgcgaaacagtacgcgctcaacgcccgttgtaccgggaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCgttgaat > 1:283637‑M2/148‑248 (MQ=255) aaaaagtacgcgctcaacgcccgttgtaccgggaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCg > 1:251167‑M2/144‑251 (MQ=255) aaagtacgcgctcaacgcccgttgtaccgggaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCt < 1:118143‑M2/110‑1 (MQ=255) gctcaacgcccgttgtaccgggaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGc < 2:58460‑M2/119‑1 (MQ=255) gctcaacgcccgttgtaccgggaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGc > 1:365572‑M2/133‑251 (MQ=255) aacgcccgttggaccgggaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccagtaacaccagtaaaaacgtggcgatcagtaataacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGt < 2:317715‑M2/123‑1 (MQ=255) accgggaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCAt > 1:210583‑M2/117‑250 (MQ=255) gaagaggaatgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATg < 1:44050‑M2/140‑1 (MQ=255) aagaggaatgtccttaatcagcagcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGACGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGt > 2:405019‑M2/111‑251 (MQ=255) atgtcattaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCCCGCCAGTGGGCGACGCATAACATGTCGCcgcg < 1:54676‑M2/148‑1 (MQ=255) attaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAgg > 1:447055‑M2/99‑251 (MQ=255) attaaccagccggcccagcccgctgcctaagggacgcgccagccccattaacaccagtaaaaacggggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCGCGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAgg < 2:49843‑M2/153‑1 (MQ=255) ttaatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGc > 2:147425‑M2/98‑251 (MQ=255) aatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaccccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTg < 2:365572‑M2/156‑1 (MQ=255) aatcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTg < 1:254968‑M2/156‑1 (MQ=255) atcagccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTGAGGCTGa < 1:240674‑M2/157‑1 (MQ=255) ccgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACtt > 1:478716‑M2/90‑250 (MQ=255) cgcgccagcccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTAt < 1:9428‑M2/163‑1 (MQ=255) gtcgtcacgcggcctaaaggacgcgccagaaccatgaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccataaTGACTACCCACCTGGTCTGGTTGCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCGGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGAGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCaa < 2:245202‑M2/166‑1 (MQ=255) cagcccgcttcctaaacgacgcgccagcaccattaacaccattaaaatcgtggcgatcagtaagaacccttgcgcagccttcaTGACTCCCCATCTGGTCTTGTTTCGCCAGGATTTACGTCTGCCCGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATg < 2:405468‑M2/168‑1 (MQ=255) cagcccgagtcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggctatcagtaagaacccttgcgcagccatccTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATg < 2:374222‑M2/168‑1 (MQ=255) ccgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCa < 1:263045‑M2/172‑1 (MQ=255) cgctgcctaaaggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCaa < 2:302290‑M2/173‑1 (MQ=255) ggacgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACCGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCt < 2:146440‑M2/184‑1 (MQ=255) acgcgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTAc < 1:402197‑M2/186‑1 (MQ=255) cgccagcaccattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACaa > 2:31497‑M2/63‑250 (MQ=255) cccagcaccattaaccccaggaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAAt < 2:46502‑M2/190‑1 (MQ=255) gcaccattaacaccagtaaaaacggggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTGCGCCAGGATTTACGTCTGCACGATAAGCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAgcg < 2:59512‑M2/194‑1 (MQ=255) accattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAAtagcgat < 1:120911‑M2/196‑3 (MQ=255) accattaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCt < 2:447055‑M2/196‑1 (MQ=255) attaacaccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGc > 1:128329‑M2/53‑251 (MQ=255) caccagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGaaa < 1:220116‑M2/204‑1 (MQ=255) cagtaaaaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGACGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGaaaa > 2:45770‑M2/45‑249 (MQ=255) aaacgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGACCTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTc > 2:188897‑M2/39‑251 (MQ=255) accggggcgatcagtaagaacccttgcgcagccatcgTGACTACCCATCTGTTCTGGTTGCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTcc < 2:457183‑M2/214‑1 (MQ=255) acgtggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGAATTCCt > 1:52444‑M2/37‑251 (MQ=255) ggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTAt > 1:110619‑M2/33‑251 (MQ=255) ggcgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTAt > 1:344499‑M2/33‑251 (MQ=255) cgatcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTg > 1:486928‑M2/31‑251 (MQ=255) gatcagtaagaaccctgccgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCGCGCTCTGGCTGCCGCCTGCCGCAATTCGTCTGCACGTGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGt < 2:85322‑M2/222‑1 (MQ=255) atcagtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGtt > 1:485959‑M2/29‑251 (MQ=255) atcagtaagaaccattgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCCCCAGGATTTACGTCTGCACGATAATCTTGCCCTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGTCGCTGTATATCGCTACACCACGCCAGTGGGCGACGCCTAACATTTCGCCGCGTCAGGCTGAACTTATCAATGCTCCACTGAATGGGCTACCAATATCGCTTGCGGAAAACGGAATTCCTTTATTGtt > 2:397412‑M2/29‑251 (MQ=255) agtaagaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCg > 1:154203‑M2/26‑251 (MQ=255) aagaacccttgcgcagccatcaTGACTACCCATCTGTGCTGGTTTCGCCAGGATTTACGTCTGCCCGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGa < 2:407995‑M2/229‑1 (MQ=255) agaacccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGaa < 1:489450‑M2/230‑1 (MQ=255) acccttgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTg > 2:58185‑M2/19‑251 (MQ=255) tgcgcagccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATg < 1:194895‑M2/237‑1 (MQ=255) agccatcaTGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGCACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTg > 2:4666‑M2/9‑251 (MQ=255) | ATCACACCAATGTTTTGATGCACGTTCAGGGTTATTTTCGCCCGCATATTGATTCCACAGAACGCCAGCAGCTGGCTGCGCTTATCGACAGTTATCGCCGTGGCGAGCAACCACTTCTTGCGCCGCTGATGCGTATCAAACACTATATGGCGCTTTATCCTGACGCCTGGCTTTCAGGGCAGCGTTATTTCGAACTTTGGCCGCGTGTGATTAACTTGCGCCATTCAGGAGTTTTATGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTG > NC_000913/739272‑739750 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |