| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,196,474 | Δ29,182 bp | [yehF]–yohC | 21 genes [yehF], yehI, yehK, yehL, yehM, yehP, yehQ, yehR, yehS, btsR, btsS, mlrA, yohO, yehW, yehX, yehY, osmF, bglX, dld, pbpG, yohC |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2196474 | 2225655 | 29182 | 31 [0] | [0] 31 | [yehF]–yohC | [yehF],yehI,yehK,yehL,yehM,yehP,yehQ,yehR,yehS,btsR,btsS,mlrA,yohO,yehW,yehX,yehY,osmF,bglX,dld,pbpG,yohC |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2196473 | 0 (0.000) | 31 (0.500) | 29/494 | 0.6 | 100% | intergenic (+140/‑1) | metG/yehF | methionine‑‑tRNA ligase/PF05406 family protein YehF |
| ? | NC_000913 | 2225656 = | 0 (0.000) | intergenic (‑25/‑145) | yohC/yohD | putative inner membrane protein/DedA family protein YohD | |||||
GCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACAGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCCCATGTAATTTTCACTGTCTGATGAACGTCCTTTTTCAGCGTGAATGATTCACAGGGTGTATGCTTACTGGCAACCAAAGGGAGACAGACTGGCCTATGGATCTCAATACACTTATCTCACAATATGGTTATGCCGCGCTGGTGATCGGTAGCCTGGCGGAAGGTGAAACCGTGACTTTGCTGGGAGGCGTTGCGGCGCAT > NC_000913/2225423‑2225905 | gaaggcatggtgatggctgccggtcctggcgggaaagatattttcctgctaagcccggatgccggtgctaaaccgggtcatcaggtgaaataatcccccttcaaggcgctgcatcgacagcgccttttctttataaattcctaaagttgttttcttgcgattttgtctctctctaacccgcataaatactggtagcatctgcattcaactggataaaattacagggatgcagaGAACCTGACAGTTCAAGt > 2:190355‑M2/234‑251 (MQ=255) gtgatggctgccggtcctggcgggaaagatattttcctgctaagcccggatgccggtgctaaaccgggtcatcaggtgaaataatcccccttcaaggcgctgcatcgacagcgccttttctttataaattcctaaagttgttttcttgcgattttgtctctctctaacccgcataaatactggtagcatctgcattcaactggataaaattacagggatgcagaGAACCTGACAGTTCAAGTATAAGTCAg < 1:418928‑M2/27‑1 (MQ=255) gtgatggctgccggtactggcgggaaagatattttccttctcagcccgggtgccggtgctaaaccgggtcatcaggtgaaataataccccttcaaggcgctgcatcgacagcgccctttctttataaattcctaaagttgttttcttgcgtatttttctctctctaacccgcataaatactggtagcatttgcattcaactggatacaattacagggctgcaagGAAACTGACAGGTCAAGTATAAGTc > 2:31873‑M2/225‑249 (MQ=255) gcgggaaagatattttcctgctaagcccggatgccggtgctaaaccgggtcatcaggtgaaataatcccccttcaaggcgctgcatcgacagcgccttttctttataaattcctaaagttgttttcttgcgattttgtctctctctaacccgcataaatactggtagcatctgcattcaactggataaaattacagggatgcagaGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGtt > 1:297563‑M2/206‑251 (MQ=255) aatgatcttttcctgctaagcccggaggccggtgctacacagggtcatcatgtgaaataatcccccttcaaggctctgcatcgacagcgccttttctttgtaaattcctcaagttgttttcttgcgattttgtctctccctaacccgcttaaatactggtagcatctgcattcaactggctaacattaccgggatgcagcGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTATATGTTcgcac > 2:107853‑M2/201‑249 (MQ=255) agatattttcctgctaagcccggatgccggtgctaaaccgggtcatcaggtgaaataatcccccttcaaggcgctgcatcgacagcgccttttctttataaattcctaaagttgttttcttgcgattttgtctctctctaacccgcataaatactggtagcatctgcattcaactggataaaattacagggatgcagaGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCCCAt < 1:216385‑M2/53‑1 (MQ=255) gctaagcccggatgccggtgctaaaccgggtcatcaggtgaaataatcccccttcaaggcgctgcatcgacagcgccttttctttataaattcctaaagttgttttcttgcgattttgtctctctctaacccgcataaatactggtagcatctgcattcaactggataaaattacagggatgcagaGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCCCATGTAATTTTCAc < 1:222199‑M2/64‑1 (MQ=255) ccggatgccggtgctaaaccgggtcatcaggtgaaataatcccccttcaaggcgctgcatcgacagcgccttttctttataaattcctaaagttgttttcttgcgattttgtctctctctaacccgcataaatactggtagcatctgcattcaactggataaaattacagggatgcagaGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCCCATGTAATTTTCACTGTCtgat < 2:319485‑M2/72‑1 (MQ=255) gatgccggtgctaaaccgggtcatcaggtgaaataatcccccttcaaggcgctgcatcgacagcgccttttctttataaattcctaaagttgttttcttgcgattttgtctctctctaacccgcataaatactggtagcatctgcattcaactggataaaattacagggatgcagaGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCCCATGTAATTTTCACTGTCTGATGaa < 1:439782‑M2/75‑1 (MQ=255) catcaggtgaaataatcccccttcaaggcgctgcatcgacagcgccttttctttataaattcctaaagttgttttcttgcgattttgtctctctctaacccgcataaatactggtagcatctgcattcaactggataaaattacagggatgcagaGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCCCATGTAATTTTCACAGTCTGATGAACGTCCTTTTTCAGCGTGAAt < 1:133268‑M2/95‑1 (MQ=255) gaaataatcccccttcaaggcgctgcatcgacagcgccttttctttataaattcctaaagttgttttcttgcgattttgtctctctctaacccgcataaatactggtagcatctgcattcaactggataaaattacagggatgcagaGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCCCATGt > 2:345760‑M2/148‑202 (MQ=255) gaaataatcccccttcaaggcgctgcatcgacagcgccttttctttataaattcctaaagttgttttcttgcgattttgtctctctctaacccgcataaatactggtagcatctgcattcaactggataaaattacagggatgcagaGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCCCATGt < 1:345760‑M2/55‑1 (MQ=255) agcgccttttctttataaattcctaaagttgttttcttgcgattttgtctctctctaacccgcataaatactggtagcatctgcattcaactggataaaattacagggatgcagaGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCCCATGTAATTTTCACTGTCTGATGAACGTCCTTTTTCAGCGTGAATGATTCACAGGGTGTATGCTTACTGGCAACCAAAGGga < 2:66074‑M2/132‑1 (MQ=255) agcgccttttctttataaattcctaaagttgttttcttgcgattttgtctctctctaacccgcataaatactggtagcatctgcattcaactggataaaattacagggatgcagaGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCCCATGTAATTTTCACTGTCTGATGAACGTCCTTTTTCAGCGTGAATGATTCACAGGGTGTATGCTTACTGGCAACCAAAGGga > 1:66074‑M2/116‑247 (MQ=255) tttctttataaattcctaaagttgttttcttgcgattttgtctctctctaacccgcataaatactggtagcatctgcattcaactggataaaattacagggatgcagaGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCCCATGTAATTTTCACTGTCTGATGAACGTCCTTTTTCAGCGTGAATGATTCACAGGGTGTATGCTTACTGGCAACCAAAGGGAGACAGACTg < 1:271585‑M2/141‑1 (MQ=255) aattcctaaagttgttttcttgcgattttgtctctctctaacccgcataaatactggtagcatctgcattcaactggataaaattacagggatgcagaGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCCCATGTAATTTTCACTGTCTGATGAACGTCCTTTTTCAGCGTGAATGATTCACAGGGTGTATGCTTACTGGCAACCAAAGGGAGACAGACTGGCCTATGGAtct > 1:207516‑M2/99‑251 (MQ=255) cctaaagttgttttcttgcgattttgtctctctctaacccgcataaatactggtagcagctgcattcaactggataaaattacagggatgcagaGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCCCATGTAATTTTCACTGTCTGATGAACGTCCTTTTTCAGCGTGAATGATTCACAGGGTGTATGCTTACTGGCAACCAAAGGGAGACAGACTGGCCTATGGATCTCAAt < 2:358465‑M2/157‑1 (MQ=255) aaagttgttttcttgcgattttgtctctctctaacccgcataaatactggtagcatctgcattcaactggataaaattacagggatgcagaGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCCCATGTAATTTTCACTGTCTGATGAACGTCCTTTTTCAGCGTGAATGATTCACAGGGTGTATGCTTACTGGCAACCAAAGGGAGACAGACTGGCCTATGGATCTCAATaca < 1:190355‑M2/160‑1 (MQ=255) aaagttgttttcttgcgattttgtctctctctaacccgcataaatactggtagcatctgcattcaactggataaaattacagggatgcagaGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCCCATGTAATTTTCACTGTCTGATGAACGTCCTTTTTCAGCGTGAATGATTCACAGGGTGTATGCTTACTGGCAACCAAAGGGAGACAGACTGGCCTATGGATCTCAATa < 1:313498‑M2/158‑1 (MQ=255) aagttgttttcttgcgattttgtctctctctaacccgcataaatactggtagcatctgcattcaactggataaaattacagggatgcagaGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCCCATGTAATTTTCACTGTCTGATGAACGTCCTTTTTCAGCGTGAATGATTCACAGGGTGTATGCTTACTGGCAACCAAAGGGAGACAGACTGGCCTATGGATCTCAATacac > 1:253694‑M2/91‑251 (MQ=255) ttgtctctctctaacccgcataaatactggtagcatctgcattcaactggataaaattacagggatgcagaGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCCCATGTAATTTTCACTGTCTGATGAACGTCCTTTTTCAGCGTGAATGATTCACAGGGTGTATGCTTACTGGCAACCAAAGGGAGACAGACTGGCCTATGGATCTCAATACACTTATCTCACAATATGGtt < 2:226356‑M2/179‑1 (MQ=255) aacccgcataaatactggtagcatctgcattcaactggataaaattacagggatgcagaGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCCCATGTAATTTTCACTGTCTGATGAACGTCCTTTTTCAGCGTGAATGATTCACAGGGTGTATGCTTACTGGCAACCAAAGGGAGACAGACTGGCCTATGGATCTCAATACACTTATCTCACAATATGTTTATGCCGCGCGGGt < 1:314570‑M2/192‑1 (MQ=255) acccgcataaatactggtagcatctgcattcaactggataaaattacagggatgcagaGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCCCATGTAATTTTCACTGTCTGATGAACGTCCTTTTTCAGCGTGAATGATTCACAGGGTGTATGCTTACTGGCAACCAAAGGGAGCCAGACTGGCCTATGGCTCTCAATACACTTATCTCACAATATGGTTATGCCGCTCTGGTg > 2:241140‑M2/59‑251 (MQ=255) aaatactggtagcatctgcattcaactggataaacttacagggatgcagaGAACCAGACAGATCAAGTATAAGTCAGCTTGTGATTATTTTATGTTCGCCCATGTAATTTTCAATGTCTGATGACCGTCCTTTTTCAGCGTGCATGATTCACAGGGTGTATGCTTACTGGCAACAAAAGGGAGACAGACTGGCCTATGGATCTCAATACACTTATCTCACAATATGGTTTTGCCGCGCTGGTGATCGGt > 2:384288‑M2/51‑249 (MQ=255) gtagcatctgcattcaactggataaaattacagggatgcagaGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCCCATGTAATTTTCACTGTCTGATGAACGTCCTTTTTCAGCGTGAATGATTCACAGGGTGTATGCTTACTGGCAACCACAGGGAGACAGACTGGCCTATGGATCTCAATACACTTATCTCACAATATGGTTATGCCGCGCTGGTGCTCGGTAGCCTGGCgg > 2:440334‑M2/43‑251 (MQ=255) gcattcaactggataaaattacagggatgcagaGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCCCATGTAATTTTCACTGTCTGATGAACGTCCTTTTTCAGCGTGAATGATTCACAGGGTGTATGCTTACTGGCAACCAAAGGGAGACAGACTGGCCTATGGATCTCAATACACTTATCTCACAATATGGTTATGCCGCGCTGGTGATCGGTAGCCTGGCGGAAGGTGaa > 1:116324‑M2/34‑250 (MQ=255) acagggatgcagaTAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCCCATGTAATTTTCACTGTCTGATGAACGTCCTTTTTCAGCGTGAATGATTCACAGGGTGTATGCTTACTGGCAACCAAAGGGAGACAGACTGGCCTATGGATCTCAATACACTTATCTCACAATATGGTTATGCCGCGCTGGTGATCGGTAGCCTGGCGGAAGGTGAAACCGTGACTTTGCTGGGAgg < 1:286624‑M2/237‑1 (MQ=255) agggatgcagaGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCCCATGTAATTTTCACTGTCTGATGAACGTCCTTTTTCAGCGTGAATGATTCACAGGGTGTATGCTTACTGGCAACCAAAGGGAGACAGACTGGCCTATGGATCTCAATACACTTATCTCACAATATGGTTATGCCGCGCTGGTGATCGGTAGCCTGGCGGAAGGTGAAACCGTGACTTTGCTGGGAGGCGt > 1:210170‑M2/12‑251 (MQ=255) gggatgcagaGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCCCATGTAATTTTCACTGTCTGATGAACGTCCTTTTTCAGCGTGAATGATTCACAGGGTGTATGCTTACTGGCAACCAAAGGGAGACAGACTGGCCTATGGATCTCAATACACTTATCTCACAATATGGTTATGCCGCGCTGGTGATCGGTAGCCTGGCGGAAGGTGAAACCGTGACTTTGCTGGGAGGCGtt > 1:22824‑M2/11‑251 (MQ=255) aGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCCCATGTAATTTTCACTGTCTGATGAACGTCCTTTTTCAGCGTGAATGATTCACAGGGTGTATGCTTACTGGCAACCAAAGGGAGACAGACTGGCCTATGGATCTCAATACACTTATCTCACAATATGGTTATGCCGCGCTGGTGATCGGTAGCCTGGCGGAAGGTGAAACCGTGACTTTGCTGGGAGTCGTTGCGGCGCAt > 1:342475‑M2/2‑251 (MQ=255) aGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCCCATGTAATTTTCACTGTCTGATGAACGTCCTTTTTCAGCGTGAATGATTCACAGGGTGTATGCTTACTGGCAACCAAAGGGAGACAGACTGGCCTATGGATCTCAATACACTTATCTCACAATATGGTTATGCCGCGCTGGTGATCGGTAGCCTGGCGGAAGGTGAAACCGTGACTTTGCTGGGAGGCGTTGCGGCGCAt > 1:30345‑M2/2‑251 (MQ=255) | GCCAGTCCGGTAAACCAGGATAACTTCAGGATAGTGCCATCGCCAAAATTCCAGCCAATCTGTGTAGTGCCAATGAAGGCGCAAATCACCGGAATCGCCGCCATCAGCAAAACGTGGTGGGTGTAATGGTGAGAAATCGTTTCGTTTTCGCGATTAATCACCTGCATTTCACGATCGGGATGGGAAAACAGTCCCCAGACATGGCTCATACCGCCCCCTTGTTGTGAGTTCATGAACCTGACAGTTCAAGTATAAGTCAGCTTGTGATTATTTTTTGTTCGCCCATGTAATTTTCACTGTCTGATGAACGTCCTTTTTCAGCGTGAATGATTCACAGGGTGTATGCTTACTGGCAACCAAAGGGAGACAGACTGGCCTATGGATCTCAATACACTTATCTCACAATATGGTTATGCCGCGCTGGTGATCGGTAGCCTGGCGGAAGGTGAAACCGTGACTTTGCTGGGAGGCGTTGCGGCGCAT > NC_000913/2225423‑2225905 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |