| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,101,395 | Δ11,672 bp | wbbL–rfbB | wbbL, insH7, wbbL, wbbK, wbbJ, wbbI, wbbH, glf, rfbX, rfbC, rfbA, rfbD, rfbB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2101395 | 2113066 | 11672 | 27 [0] | [0] 27 | wbbL–rfbB | wbbL,insH7,wbbL,wbbK,wbbJ,wbbI,wbbH,glf,rfbX,rfbC,rfbA,rfbD,rfbB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2101394 | 0 (0.000) | 27 (0.440) | 27/490 | 0.7 | 100% | intergenic (‑126/+2) | gnd/wbbL | 6‑phosphogluconate dehydrogenase, decarboxylating/interrupted rhamnosyltransferase WbbL |
| ? | NC_000913 | 2113067 = | 0 (0.000) | intergenic (‑6/+367) | rfbB/galF | dTDP‑glucose 4,6‑dehydratase 1/UTP:glucose‑1‑phosphate uridylyltransferase, low activity | |||||
TCCGTCTTCTCACGGGAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2101150‑2101394‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atTTATTCCATATTACTTCAGAGCATGCTGTGAAATAAGCGGCTCTCAGTTTGATTAATAGAGGTATTAATGCACGCTACCGCCCCTGGCTTTACAGCTACCAGAGCACTGCATGCATGCCTATGATGTGACGAGCGTTACCCACTCGCGCTAAACCCGAAAAATTCAAACGCTAATTGTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGC > NC_000913/2113067‑2113305 TCCGTCTTCTCACGGGAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATTTA < 2:242137/248‑1 CCGTCTTCTCACGGGAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATTTATTCC > 2:477617/1‑251 GTCTTCTCACGGGAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATTTATTCCAT > 1:205254/1‑251 TCTCACGGGAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATTTATTCCATAT < 1:477617/249‑1 GGGAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATTTATTCCATATTACTTCAG < 2:199700/251‑1 CGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATTTATTCCATATTACTTCAGAGCAT < 2:159051/251‑1 TGAAAATAGTGACGGTATAACCACGGCTTACGATGTTGATCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTAGCCATGCTTATATGCTTACGGCTTTATTTAATCCATATTACTTCAGAGCATGCT < 2:166/250‑1 GAAAATAGAGACGGTATAACCCCGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATTTATTCCATATTACTTCAGAGCATGCTGT < 2:332826/251‑1 GAAAATAGAGACGGTATAACCACGGCTTTCGATGTGGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATTTATTCCATATTACTTCAGAGCATGCTG < 2:414189/250‑1 TGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGCTCTGTTGCTTGGACATTCCATACTCATGTCAGGCGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACACAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATTTATTCCATATTACTTCAGAGCATGCTGTGAAATAAGCGGCTCTCAGTTTGATTAATAGAGGT > 2:442854/1‑250 TGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATTTATTCCATATTACTTCAGAGCATGCTGTGAAATAAGCGGCTCTCAGTTTGATTAATAGAGGT < 1:275085/250‑1 AAGGTTGCGTCCAATCACTGCCATACCGACTACGCCGATCTGGAGCTTGGACATTACATACTCCTGTCAGGAGTGATCACCACGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATTTATTCCATATTACTTCAGAGCATGCTGTGAAATAAGCGGCTCTCAGTTTGATTAATAGAGGTATTAATGC > 2:427804/1‑251 CACTGCCATACCGAATACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAATTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATTTATTCTATATTACTTCAGAGCATGCTGTGAAATAAGCGGCTCTCAGTTTGATTAATAGAGGTATTAATGCACGCTACCGCCCCTG < 1:430855/251‑1 CCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATTTATTCCATATTACTTCAGAGCATGCTGTGAAATAAGCGGCTCTCAGTTTGATTAATAGAGGTATTAATGCACGCTACCGCCCCTGGCTTT < 1:313683/251‑1 GTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATTTATTCCATATTACTTCAGAGCATGCTGTGAAATAAGCGGCTCTCAGTTTGATTAATAGAGGTATTAATGCACGCTACCGCCCCTGGCTTTACAGCTACCAGAGCACTGCGTGCATGCCTATGATGTGACGAGCGT < 2:74813/251‑1 CGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATTTATTCCATATTACTTCAGAGCATGCTGTGAAATAAGCGGCTCTCAGTTTGATTAATAGAGGTATTAATGCACGCTACCGCCCCTGGCTTTACAGCTACCAGAGCACTGCGTGCATGCCTATGATGTGACGAGCGTTACCCACTCGCGCTA < 1:494469/251‑1 GCGGCCTGGAAGGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATTTATTCCATATTACTTCAGAGCATGCTGTGAAATAAGCGGCTCTCAGTTTGATTAATAGAGGTATTAATGCGCGCGACCGCCCCTGGCTTTACAGCTACCAGAGCACTGCGTGCATGCCTATGATGTGACGAGCGTTACCCACTCGCGCTAAACCCGAAAAATTC < 1:197700/251‑1 GGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATTTATTCCATATTACTTCAGAGCATGCTGTGAAATAAGCGGCTCTCAGTTTGATTAATAGAGGTATTAATGCACGCTACCGCCCCTGGCTTTACAGCTACCAGAGCACTGCGTGCATGCCTATGATGTGACGAGCGTTACCCACTCGCGCTAAACCCGAAAAATTCA > 1:457988/1‑250 GTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATTTATTCCATATTACTTCAGGGCATGCTGTGAAATAAGCGGCTCTCAGTTTGATTAATAGAGGTATTAATGCACGCTACCGCCCCTGGCTTTACAGCTACCAGAGCACTGCGTGCATGCCTATGATGTGACGAGCGTTACCCACTCGCGCTAAACCCGAAAAATTCAAACGCTAATT < 2:205254/250‑1 CGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATTTATTCCATATTCCTTCAGAGCATGCTGTGAAATAAGCGGCTCTCAGTTTGATTAATAGAGGTATTAATGCACGCTACCGCCCCTGGCTTTACAGCTACAAGAGCACTGCGTGCATGCCTATGATGTGACGAGCGTTACCCACTAGCGCTAAACCCGAAACATTCAAACGCTAATTGTCT > 2:10458/1‑251 AGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATTTATTCCATATTACTTCAGAGCATGCTGTGAAATAAGCGGCTCTCAGTTTGATTAATAGAGGTATTAATGCACGCTACCGCCCCTGGCTTTACAGCTACCAGAGCACTGCGTGCATGCCTATGATGTGACGAGCGTTACCCACTCGCGCTAAACCCGAAAAATTCAAACGCTAATTGTCTTACCAATCCGCTCTGGA < 2:457988/251‑1 GCTTATCCATGCTTATATGCTTACGGCTTTATTTATTCCATATTACTTCAGAGCATGCTGTGAAATAAGCGGCTCTCAGTTTGATTAATAGAGGTATTAATGCACGCTACCGCCCCTGGCTTTACAGCTACCAGAGCACTGCGTGCATGCCTATGATGTGACGAGCGTTACCCACTCGCGCTAAACCCGAAAAATTCAAACGCTAATTGTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAAC < 1:442854/251‑1 cCCATTCTTATATGCTTACGGCTTTATTTATTCAATATTACTTCAGAGCATGCTGTGAAATAAGCGGCTCTCAGTTTGATTAATAGAGGTATTAATGCACGCTACCGCCCCTGGCTTTACAGCTACCAGAGCACTGCGTGCATGCCTATGATGTGACGAGCGTTACCCACTCGCGCTAATCCCGAAAAATTCAAACGCTAATTGTCTTACCAATCAGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGA < 1:73996/250‑1 TCCATGCTTATATGCTTACGGCTTTATTTATTCCATATTACTTCAGAGCATGCTGTGAAATAAGCGGCTCTCAGTTTGATTAATAGAGGTATTAATGCACGCTACCGCCCCTGGCTTTACAGCTACCAGAGCACTGCGTGCATGCCTATGATGTGACGAGCGTTACCCACTCGCGCTAAACCCGAAAACTTCAAACGCTAATTGTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTG > 1:431104/1‑250 ATGCTTACGGCTTTATTTTTTCCATATTACTTCAGAGCATGCTGTGAAATAAGCGGCTCTCAGTTTGATTAATAGAGGTATTAATGCACGCTACCGCCCCTGGCTTTACAGCTACCAGAGCACTGCGTGCATGCCTATGATGTGACGAGCGTTACCCACTCGCGCTAAACCCGAAAAATTCAAACGCTAATTGTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCT < 1:493076/250‑1 GCTTACGTCTTTATTTATTCCATATTACTGCAGAGCATGCTGTTAATTAGGCGGCTCTCAGTTTGATTAATAGAGGTATTAATGCACGCTACCGCCCCTGGCTTTACAGCTACCAGAGCACTGCGTGCATGCCTATGATGTGACGAGCGTTACCCACTCGCGCTAAACCCGAAAAATTCAAACGCTAATTGTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCGGGAAAACTTTGAATAAATCCCTACT < 1:103099/251‑1 TTACGGCTTTATTTATTCCATATTACTTCAGAGCATGCTGTGAAATAAGCGGCTCTCAGTTTGATTAATAGAGGTATTAATGCACGCTACCGCCCCTGGCTTTACAGCTACCAGAGCACTGCGTGCATGCCTATGATGTGACGAGCGTTACCCACTCGCGCTAAACCCGAAAAATTCAAACGCTAATTGTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGC > 2:342123/1‑251 TCCGTCTTCTCACGGGAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2101150‑2101394‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atTTATTCCATATTACTTCAGAGCATGCTGTGAAATAAGCGGCTCTCAGTTTGATTAATAGAGGTATTAATGCACGCTACCGCCCCTGGCTTTACAGCTACCAGAGCACTGCATGCATGCCTATGATGTGACGAGCGTTACCCACTCGCGCTAAACCCGAAAAATTCAAACGCTAATTGTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGC > NC_000913/2113067‑2113305 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |