| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,161,142 | 0 | C | A | 21.6% | 104.0 / 10.1 | 51 | Q26K (CAA→AAA) | fabR | DNA‑binding transcriptional repressor FabR |
| Reads supporting (aligned to +/- strand): ref base C (35/5); new base A (0/11); total (35/16) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.17e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GGCCTTTGCTTTGTCTGTTTCTTACTTTTGCCCTGACGTTTTATTGGATTTTTATCGACGATACTCTCCGTTTAAGCGGCAGGTTTCCGCTGTACGTAAAAGAACCGG‑CCAAAGAAT‑TGCAGTAAATATGTTTTATTGCGTTACCGT‑TCATTCACAATACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACC‑TCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTG > NC_000913/4160893‑4161384 | ggCCTTTGCTTTGTCTGTTTCTTACTTTTGCCCTGACGTTTTATTGGATTTTTATCGACGATACTCTCCGTTTAAGCGGCAGGTTTCCGCTGTACGTAAAAGAACCGG‑CCAAAGAAT‑TGCAGTAAATATGTTTTATTGCGTTACCGT‑TCATTCACAATACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGcaaca < 1:180618/251‑1 (MQ=255) gctttgTCTGTTTCTTACTTTTGCCCTGACGTTTTATTGGATTTTTATCGACGATACTCTCCGTTTAAGCGGCAGGTTTCCGCTGTACGTAAAAGAACCGG‑CCAAAGAAT‑TGCAGTAAATATGTTTTATTGCGTTACCGT‑TCATTCACAATACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGa > 1:321201/1‑250 (MQ=255) gctttgTCTGTTTCTTACTTTTGCCCTGACGTTTTATTGGATTTTTATCGACGATACTCTCCGTTTAAGCGGCAGGTTTCCGCTGTACGTAAAAGAACCGG‑CCAAAGAAT‑TGCAGTAAATATGTTTTATTGCGTTACCGT‑TCATTCACAATACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGa > 1:297048/1‑250 (MQ=255) tttgTCTGATTCTTACTTTTGCCCTGACGTTTTATTGGATTTTTATCGACGATACTCTCCGTTTAAGAGGCAGGTTTCCGCTGTACGTAACAGAACCGG‑CCAAAGAAT‑TGCAGTAAATATGTCTTATTGCGTTACCGT‑TCATTCACAATACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCCGTACTTTTGGCAAGGA‑TTCAGACATCGTCATGGGCGTAAGAGCGCAACAAAAAGaaa > 1:171136/1‑250 (MQ=255) ttCTTACTTTTGCCCTGACGTTTTATTGGATTTTTATCGACGATACTCTCCGTTTAAGCGGCAGGTTTCCGCTGTACGTAAAAGAACCGG‑CCAAAGAAT‑TGCAGTAAATATGTTTTATTGCGTTACCGT‑TCATTCACAATACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTCCTTTTGTCAAGGA‑TTCAGCCACCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAAACccgcc < 1:222418/250‑1 (MQ=255) ttttGCCCTGACGTTTTATTGGATTTTTATCGACGATACTCTCCGTTTAAGCGGCAGGTTTCCGCTGTACGTAAAAGAACCGG‑CCAAAGAAT‑TGCAGTAAATATGTTTTATTGCGTTACCGT‑TCATTCACAATACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCtg > 2:247955/1‑251 (MQ=255) ggtttATTGGGATTTTATCGTCGATAATCTCCGTTTTAGCGGCAGGTTTTCGGTGTACGTAAAAGAACCGG‑CCAAAGAAT‑TGCCGTAAATATGGTTTTTTGCGTTACCGT‑TCATTCACAAAACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTTGCAAGGG‑GTCAGTAATCGTGGTGTGCGTAAGAGCGCAACCAAAAAAAAAAACCCCCCGCTCTCTGGTGGAAGCCGcc > 2:219117/3‑250 (MQ=255) ttattgtttttttATCAACGATCCCTTCCGTTTAAGCGGCAGTTTTCCGCTGTCCGTAAAAGACCCGG‑CCAAAAAAT‑TGCAGTAAATTTTTTTTTTGGCGTTCCCGT‑TCAGTCAAAATATTGGA‑GAAATCCATTATGTTCTTTCTCTGT‑TATAGTGCCAGCAGTCCTTTTGGAAAGGA‑TTCAGACATCGTAAGGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCAtt < 1:397406/242‑1 (MQ=255) aTCGACGATACTCTCCGTTTAAGCGGCAGGTTTCCGCTGTACGTAAAAGAACCGG‑CCAAAGAAT‑TGCAGTAAATATGTTTTATTGCGTTACCGT‑TCATTCACAATACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTg > 1:389359/1‑251 (MQ=255) gacgaTACTCTCCGTTTAAGCGGCAGGTTTCCGCTGTACGTAAAAGAACCGG‑CCAAAGAAT‑TGCAGTAAATATGTTTTATTGCGTTACCGT‑TCATTCACAATACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTg > 1:358611/1‑251 (MQ=255) gacgaTACTCTCCGTTTAAGCGGCAGGTTTCCGCTGTACGTAAAAGAACCGG‑CCAAAGAAT‑TGCAGTAAATATGTTTTATTGCGTTACCGT‑TCATTCACAATACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTg > 1:293037/1‑251 (MQ=255) aatggaggacgaccaatatccGGCAGTTTGCCGCGGTAGGAAAAAGACCGGG‑CAAAAGAAT‑TGCAGAAAATATGTTTTATGGCGTGCCCGT‑CAATTCCCAATACTGGA‑GCAATCCAGTATGTCCATCCTCTGG‑TAAAGTCCCAGCAGTACTTTTGGGAAGTA‑TGCAGACATCGTGATGGGCTTAAGAGCGCAAAAAAAAAAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCt < 1:163757/230‑1 (MQ=255) acgaTACTCTCCGTTTAAGCGGCAGGTTTCCGCTGTACGTAAAAGAACCGG‑CCAAAGAAT‑TGCAGTAAATATGTTTTATTGCGTTACCGT‑TCATTCACAATACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTg > 2:53741/1‑250 (MQ=255) gaTACTCTCCGTTTAAGCGGCAGGTTTCCGCTGTACGTAAAAGAACCGG‑CCAAAGAAT‑TGCAGTAAATATGTTTTATTGCGTTACCGT‑TCATTCACAATACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGAAAGGA‑TTCAGACATCGTGAGGGGCGTAAGAGCGCAAAAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAAc < 2:389359/251‑1 (MQ=255) aTACTCTCCGTTTAAGCGGCAGGTTTCCGCTGTACGTAAAAGAACCGG‑CCAAAGAAT‑TGCAGTAAATATGTTTTATTGCGTTACCGT‑TCATTCACAATACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACg > 2:220506/1‑251 (MQ=255) aCTCTCCGTGTAAGCGGCAGTTTTCGGCTGTACTAAAAAAAACCGG‑C‑AAAAAATGTGCATAAAATATTTTTTTTTGCGTT‑GCGTGTAATCCAAAATA‑TGGAAGCAATCCGTTATGTTCATCCGTGGG‑TATAGGGCAAGCAGTACTTTGGGCAAGGT‑TTCAGACGGGGGGAGGGGCGTAAGGGCGCAACAAAAAAAAAAACCCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCa < 2:38812/251‑1 (MQ=255) aaGCGGCAGGTTTCCGCTGTACGTAAAAGAACCGG‑CCAAAGAAT‑TGCAGTAAATATGTTTTATTGCGTTACCGT‑TCATTCACAATACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGc > 2:231723/1‑251 (MQ=255) gcgggtggTTTCCGTTTTACGAAAAAGACCCGG‑CAAAAAAAT‑TGCATTAAAAATTTTTTATTGCGTTACCTT‑TAATTCAAAATACTGGA‑GCACTCAAGTTTTTTCATTCGCTGG‑TATGGTGCCAGCAGT‑CCTTTGGGAAGGAATTCAGACTTCGGGGGGGGCGAAAGAGCGCAAAAAAAAAAAAAACCCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCt < 1:44157/245‑1 (MQ=255) tccgtcggTACGTAAAAGA‑CCGGACAAAAGATT‑TGTAGTAAATATGTTTAATGGCGTTACCGT‑TCATTCAAAATACTGGA‑GAAACCCGGTGTTTTCATTCTCGGG‑TATAGGGCCGGCATTATTGGTGGCAAGGA‑TTCAGACATCGTGTTGGGCGTAAGAGCGTAAAAAAAAAAAAAACCCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGc < 1:170925/243‑1 (MQ=255) gAACCGG‑CCAAAGAAT‑TGCAGTAAATATGTTTTATTGCGTTACCGT‑TCATTCACAATACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGa > 2:291749/1‑249 (MQ=255) cgggcaaaaGAAT‑TGCGGTAAATATGTTTTTTTGCTTTCCCGT‑TCATTCAAAATACGGGA‑GCAAACAAGTTTGTTCATTTTCTGG‑TATAGTGCCAGAAGTACTTTTGGAAAGGA‑TTCAGACATGGGGAGGGGCGAAAGAGCGCAAAAAAAAAAAAAACCCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCgg < 2:181044/245‑1 (MQ=255) gCAGTAAATATGTTTTATTGCGTTACCGT‑TCATTCACAATACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCAcc > 2:28921/1‑251 (MQ=255) atatGTTTTATTGCGTTACCGT‑TCATTCACAATACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACC‑TCttttt > 2:15553/1‑251 (MQ=255) ttATTGCGTTACCGT‑TCATTCACAATACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACC‑TCTTTTTATCGGc > 2:184118/1‑250 (MQ=255) tATTGCGTTACCGT‑TCATTCACAATACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACC‑TCTTTTTATCGGCAt > 1:202140/1‑251 (MQ=255) cGTTACCGT‑TCATTCACAATACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGAATTGCTCCCACC‑TCTTTTTATCGGCAttttcg > 2:239986/1‑248 (MQ=255) cGTTACAGT‑TCATTCACAATACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACC‑TCTTTTTATCGGCATTTCcg > 1:444655/1‑251 (MQ=255) cccGT‑TCATTCACAATACGGGA‑GCAATCCCGTATGTTCTTTCTCTGT‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGAAAAAAAAAAAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACC‑TCTTTTTATCGGCATTTCCGCGAc < 1:231723/250‑1 (MQ=255) ccGT‑TCATTCACAATACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACC‑TCTTTTTATCGGCATTTCCGCGACg > 2:41170/1‑251 (MQ=255) gT‑TCATTCACAATACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACC‑TCTTTTTATCGGCATTTCCGCGACGt > 1:142691/1‑250 (MQ=255) t‑tcattcaCAATACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACC‑TCTTTTTATCGGCATTTCCGCGACGt > 1:173942/1‑249 (MQ=255) attcaCAATACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAA‑CCCCCCGGTCGGTGGGGGGAGCCGCCTTTAACCAATTTAGTGCTTAACCCAGCTTCGGCAGCCTGAGGTTGCGTGGAGTGGCGCCTGAAGCGGGCAATGCTCCCACCCTCttttaacggccattccgccgcgtagacgg > 1:271464/1‑226 (MQ=255) ttcaCAATACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACC‑TCTTTTTATCGGCATTTCCGCGAGGTAGACg > 2:459406/1‑250 (MQ=255) caATACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACC‑TCTTTTTATCGGCATTTCCGCGACGTAGACGAACTg > 1:274068/1‑251 (MQ=255) aaaTACGGGA‑GCAATCCAGTTTGTTCATTC‑CTGGGTATAGTGCCAGCAGTATTTTGGGCAAGGA‑TTAAGACATCGGGAGGGGCGTAAGAGCGAAAAAAAAAAAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACC‑TCTTTTTATCGGCATTTCCGCGACGTAGACGAACTg < 1:210424/250‑1 (MQ=255) aaTACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACC‑TCTTTTTATCGGCATTTCAGCGACGTAGACGAAcggg > 2:181498/1‑248 (MQ=255) gtgA‑GCAATCCAGTTTGTTCATTCTCTGG‑TATAGTGCAAGCATTCTTTTTGGCAAGAA‑TTCAGCCATCGTGATGGCCGTAAGGGCGCAAAAAAAAAAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACC‑TCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCt < 1:35450/248‑1 (MQ=255) gCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCTAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACC‑TCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGAcc > 1:305939/1‑250 (MQ=255) cAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACC‑TCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTtg > 1:166273/1‑251 (MQ=255) ttCATTCTCTGG‑TATAGTGCAAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAACACCCGCCGTTCGCTGGTGGAAGCAGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCACCC‑TCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATgag > 2:99908/1‑249 (MQ=255) cATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCCCC‑TCTTTTTATCGGCATTTCCGCTACGTAGACGAACTGGGTCTGTCCATGGTTGATGAGAGCg > 2:429976/1‑251 (MQ=255) cggttataGTGCCGGCAGTACTTTGGGCAAGGA‑TTCAGACTTCGTGAGGGGCGAAAGAGCGCAAAAAAAAAAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACC‑TCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGtt < 1:291749/244‑1 (MQ=255) g‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACC‑TCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGc > 2:358372/1‑251 (MQ=255) aCTTTTGGAAAGGA‑TGCAGACATCGTGAGGGGCGAAAGAGCGAAAAAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACC‑TCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACGCCAACTCATgc < 1:38211/250‑1 (MQ=255) tGGCAAGGA‑TTAAGACATCGGGAGGGGCGTAAGAGCGCAACAAAAAAAAAAACCCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACC‑TCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACGCCAACTCATGCGCCAg < 1:41170/250‑1 (MQ=255) aGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACC‑TCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACGCCAACTCATGCGCCAGGCGCGt > 1:404763/1‑251 (MQ=255) ggA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGACCGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACC‑TCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACGCCACCTCATGCGCCAGGCGCGTc > 2:97611/1‑251 (MQ=255) acatggggaggggCGTAAGAGACCAACAAAAAAAAAAACCCCGCCGGTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACC‑TCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATc < 1:201929/241‑1 (MQ=255) acggtgaggggtgaaaGAGCACAAAAAAAAAAAAATCCCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACC‑TCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAAGGCTACGCCAACTCATGCGCCATGCGCGTCAGCGTATCGc < 2:145229/237‑1 (MQ=255) gATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACC‑TCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCaa > 1:278725/1‑249 (MQ=255) aaGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACC‑TCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAgtg > 2:210242/1‑251 (MQ=255) gagCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACC‑TCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGtgtg > 1:314083/1‑251 (MQ=255) | GGCCTTTGCTTTGTCTGTTTCTTACTTTTGCCCTGACGTTTTATTGGATTTTTATCGACGATACTCTCCGTTTAAGCGGCAGGTTTCCGCTGTACGTAAAAGAACCGG‑CCAAAGAAT‑TGCAGTAAATATGTTTTATTGCGTTACCGT‑TCATTCACAATACTGGA‑GCAATCCAGTATGTTCATTCTCTGG‑TATAGTGCCAGCAGTACTTTTGGCAAGGA‑TTCAGACATCGTGATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACC‑TCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTG > NC_000913/4160893‑4161384 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |