| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,159,837 | 0 | A | G | 32.8% | 111.0 / 13.9 | 59 | I572T (ATC→ACC) | fhuE | ferric coprogen/ferric rhodotorulic acid outer membrane transporter |
| Reads supporting (aligned to +/- strand): ref base A (6/33); new base G (19/0); total (26/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.87e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GCCAGTTAACACCACCGCCGACCGTCAACTCTGGCATGACAGGCAACCGATAGCTGGTGAACATTTTAACCGTGGTGCGTGGCAGATTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAG‑TTGTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGCTGGAAAATAGAGGTATAGCTGGCGTAGGTCGACCAGTTGTCATTGATGTCAAACACCAGACCAGCGTAAGGCGTGGTGTGGTT > NC_000913/1159589‑1160084 | gCCAGTTAACACCACCGCCGACCGTCAACTCTGGCATGACAGGCAACCGATAGCTGGTGAACATTTTAACCGTGGTGCGTGGCAGATTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGATa < 1:247466/251‑1 (MQ=255) gTTAACACCACCGCCGACCGTCAACTCTGGCATGACAGGCAACCGATAGCTGGTGAACATTTTAACCGTGGTGCGTGGCAGATTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGGTAGgtg > 1:56650/1‑251 (MQ=255) caccacCGCCGACCGTCAACTCTGGCATGACAGGCAACCGATAGCTGGTGAACATTTTAACCGTGGTGCGTGGCAGATTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGATAGGTGTACCg < 1:113817/251‑1 (MQ=255) accGCCGACCGTCAACTCTGGCATGACAGGCAACCGATAGCTGGTGAACATTTTAACCGTGGTGCGTGGCAGATTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGGTCGGTGTACCGGTgg > 1:384460/1‑251 (MQ=255) ccgccgACCGTCAACTCGGTCAGGACTGGCAACTGGTAGCTCGTGGAAGTTTTAGTCGTGGTGCGTGGCAGATTTGGGTTAACGGTGTTTCCTGCGTTATCCTCGGCAATATAGCGCGTTGCTCCAAATGTCAGCTGCCAGTTTTCGGTTAGTGCTCTTTTTAGTTGAAATTCCACCCCTTTACAGACTGTCGCATCCTCCTCGTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGa < 2:240954/251‑1 (MQ=255) gccgACCGTCAACTCTGGCATGACAGGCAACCGATAGCTGGTGAACATTTTAACCGTGGTGCGTGGCAGATTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGACt < 2:26305/251‑1 (MQ=255) aCTCTGGCATGACAGGCAACCGATAGCTGGTGAACATTTTAACCGTGGTGCGTGGCAGATTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTTCTGTCGGGGATAgggggcccgggggaccgcgcgccattc > 1:233824/1‑226 (MQ=255) ggCATGACAGGCAACCGATAGCTGGTGAACATTTTAACCGTGGTGCGTGGCAGATTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATc < 1:363457/248‑1 (MQ=255) ggCATGACAGGCAACCGATAGCTGGTGAACATTTTAACCGTGGTGCGTGGCAGATTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTg < 2:86485/251‑1 (MQ=255) aTGACAGGCAACCGATAGCTGGTGAACATTTTAACCGTGGTGCGTGGCAGATTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCCCGTTG‑TGCCGGGGATAGGGGTACCGGTGGACGGGGTGGCATTATCCTggcc > 2:362515/1‑248 (MQ=255) ggCAACCGATAGCTGGTGAACATTTTAACCGTGGTGCGTGGCAGATTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTTTCC‑GTTGCTGCCGGGGGTAGGGGTACCGGTGGGCTGGGGGGCATTATCCTTCTCCATACg > 2:120843/1‑251 (MQ=255) aCCGATAGCTGGTGAACATTTTAACCGTGGTGCGTGGCAGATTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGGTAGGGGTACCGGTGGACTGAGCGACATTTACCTGCTCAATACggg > 1:70329/1‑248 (MQ=255) ccGATAGCTGGTGAACATTTTAACCGTGGTGCGTGGCAGATTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGa < 1:120843/251‑1 (MQ=255) aTAGCTGGTGAACATTTTAACCGTGGTGCGTGGCAGATTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATgg < 1:235221/251‑1 (MQ=255) aTTTTAACCGTGGTGCGTGGCAGATTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGGTAGGGGTACCGGGGGGCTGGGCGACATTATCCCGCTCAAAACGGAAGGTGGCCAACgggggggg > 1:392194/1‑244 (MQ=255) cGTGGTGCGTGGCAGATTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGGCTTTC‑CC‑CTTTCTGCCGGGGGTAGGTGTACCGGTGGACTGAGCGAAATTATCCTTCGCAATACGGGAGATGGTCAACGTGGTGGTGAGAccgc > 1:26597/1‑248 (MQ=255) cAGAGTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGGCAGCTGCCAGTTGTAGGTAATTGCGCCGTGGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGt < 1:63420/251‑1 (MQ=255) aTTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCg < 2:233824/251‑1 (MQ=255) aGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGAtt < 2:59125/251‑1 (MQ=255) tAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAg < 1:212495/250‑1 (MQ=255) ggCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGGTAGGTGTACCGGTGGGCTGAGCGACATTTTCCTGCTCAATACGGGAGATGGCTCACGTGGGGGTCCGACGGCTTTTCATCCAGTCCCATTTCAGAcccc > 1:69339/1‑250 (MQ=255) ggCGTTTCCTTCGGTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAACTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCa < 2:16775/251‑1 (MQ=255) cGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGGTAGGGGGACCGGTGGGCTGGGCGGCATTATCCTGCTCCATACGGAAGATGGCTAACGTGGTGGTCAGACGGCTATTTATCCAGTCCGGtttaaggaccagc > 1:145248/1‑241 (MQ=255) ttCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTc < 2:347402/250‑1 (MQ=255) cgttagcttctGCAATATCGCGCGTTGCGCCACATTTCAGCTGTCAGTTGGCGGTAAGTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTGAGAGGCGC‑GTTCGCT‑GTTGCTGCTGTGTATAGGTGTACAGGTGGACTGAGCGACCTTATCCTGCTCAATACTGAAGATGGCTAACGTGGTGTTTTGACGGTTATTCATCCAGTCCGATTTCCGACCCAgtttttagtt < 2:362223/242‑10 (MQ=255) cGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAg‑tt < 2:269359/250‑1 (MQ=255) gTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTTGCC‑GTTGCTGCCGGGGGTAGGGGTACCGGGGGACTGAGCGACATTATCCTGCTCAATACGGGAGATGGCTAACGGGGGGGTCAGACGGCTATTCATCCAGTCCGATTTTAGACCCAGCTCGTAg‑ttgt > 1:229598/1‑251 (MQ=255) ataGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAG‑TTGTTACCGGTGATTGGAg < 1:345170/251‑1 (MQ=255) cgcCAAATGTCACCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCCTCCCCCGCTTTATAGGCGG‑TTTCTCC‑CCTGCTGCCGGGGGTAGGGGCACCGGGGGGCTGTGCCACATTTTTCTGCTCCATACGGGGGGTGGGTAAAGGGGGGGTCAGGCGGCTATTTATCCTACCCGATTTCCGACCCAGCCCGTTG‑TTGGTACCGGGGTTTGGGACCAGataattt > 2:136481/1‑247 (MQ=255) cAAATGTCAGCTGCCAGTTGTCGGGAATTGCGCCGTTGTGATCAAATTACACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCCCC‑GCTGCTCCCGGGGGAAGGGGGAACGGTGGACAGAGCGACAATATCTCGCTCCAAACCGAAGAAGGCTAAAGAGGAGGGCAGACGGGTATTCATCCACACCGATTTCCGAACCAGACCGGAG‑GTGGTACCGGGGATTGGAGCCAGAGAttttccc > 2:53494/1‑247 (MQ=255) aaTGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGGTAGGTGGACCGGGGGACTGAGCGAGATTTTTCTTCTCAATACGGGAAAGTGCTAACGGGGTGGGGCGACGGCCATTCATCCCGTCCGGTTTTAGACCCAGCTCGGAA‑TTGTTACCGGTGATTTGAGGCAGAAATTTGCCTg > 1:419944/1‑250 (MQ=255) gTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAG‑TTGTTACCGGTGATTGGAGCCAGATATTTGCCTGAACt < 1:84113/251‑1 (MQ=255) gCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GCTGCTGCCGGGGGTAGGTGGACCGGTGGACTGAGCGACATTATCCTGCACAATACGGGAGATGGGTAACGTGGGGGGCAGAAGGCTCTTCATCCAGTCCGATTTCAGACCCAGCCCGTAG‑TTGTTACCGGTGGTTGGCGGCAGATATTTTACTGAACTGTc > 1:348115/1‑250 (MQ=255) gCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAG‑TTGTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGa < 1:74878/251‑1 (MQ=255) cAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAG‑TTGTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATc < 2:56650/251‑1 (MQ=255) cAGTTGTAGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTTGGC‑CTTGCTTCCGGGGGAAGGTGTAACGGGGGACGGAGCGAAATTATACTGCTCAATACGGGAGATGGCTAAAGTGGGGGTCAAACGGCTATTCATTCAGAACGATTTCAAACCCCGCTCGTAGGTGGTAACCGG‑GATTAGGGCCAGATTTTTGCCTGAACTGACACCATc > 1:19826/1‑251 (MQ=255) aGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGGTAGGGGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGGAGAAGGCTAACGTGGTGGGCAGACGGCTATTCATCCAGTCCGCTTTTAGACCCAGCTCGTAG‑TTGTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATc > 1:218013/1‑250 (MQ=255) ggTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTTCTGCCGGGGATAGGGGTACCGGTGGGCTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAAAGTGGGGGTCAGACGGCTATTCATCCAGTCCGATTTTAGACCCAGCTCGTAG‑TTGTTTCCGGGGATTTGGGGCAGATATTTTCCTGAACTGTCACGCTCAtttttcg > 1:330222/1‑248 (MQ=255) aaTTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCAGCCACCGCGTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAG‑TTGTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGc < 2:368089/250‑1 (MQ=255) ccGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAG‑TTGTTACCGGTGATTGGAGCCAGATATTTGCCTGATCTGTCACGATCATTTTGCGGCTGCAAAAt < 1:315331/251‑1 (MQ=255) tGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAG‑TTGTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGCTGGAAAATaga < 1:334908/250‑1 (MQ=255) aGTTCAATTTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGTGGTGGGCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAG‑TTGTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGCTGGAAAATAGAGGt < 1:404844/251‑1 (MQ=255) aGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGTTGCCCGGGCTAGGGGTACCGGTGGACTGGGGGACATTTTTCTGCTCAATAAGGAGAATGGGAAACGGGGTGGTCAGACGGGCATTCATACCGTCCGTTTTTAGACCCAGCTCGTAG‑TTGTTACCGGGGATTGGAGCCAGATATTTGCCCGTAATGTCACGAGCATTTTGGGGCTGGGAAAttagggg > 2:125584/1‑245 (MQ=255) ttCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGGCGGGGGTAGGGGTAACGGGGGAATGAGCGGCATTTTTCTGGTCAATAAGGGAGAAGGCTAACGGGGGGGGCGGACGGGCATTTAACCCGTCCGATTTTAGACCCAGCACGTAG‑GTGGTAACGGGGGTTGGAGCCAGATATTTGCCTGAACTGGTACGAACAtttttggggtgggaaagagagggat > 2:133368/1‑230 (MQ=255) cAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GCTTCTGGCGGGGGGAGGTGGACCGGGGGACTGAGCGACCTTATCCCGCTCAATATGGAAGATGGGCAACGGGGGGGTCAGACGGCTATTTATCCCGTCCGACTTTAGGACCAACTCGTAT‑TTGTTTCCGGGGATTGGAGCCCGATATTTTCCTTAACTGTCACCGTTATTTTTCGGCTGGGAAATAGAggggta > 1:189456/1‑246 (MQ=255) ccACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAG‑TTGTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGCTGGAAAATAGAGGTATAGCTGGCg < 2:69339/251‑1 (MQ=255) ttACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGGC‑GGTTCTGCCGGGGGTAAGGGTAACGGGGGGATGAGCGGCATTATCCTTCTCAATAAGGAAGATGGCTAACGGGGGGGGCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAG‑TTGTTAACGGTGATTGGAGCCAGATATTTGCCTGAAATGTCAAGGACCTTTTTCGGCTGGGAAATAGAGGTATAGCTGGCGttgggtgg > 1:225890/1‑244 (MQ=255) actgactgTCCCATCCGCCGCTTTATAGGCGG‑TTTCGTC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGTGGTGGTCAGGCGGCTATTCAGCCAGTCCGATTTCAGACCCAGCTCGTAG‑TTGTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGCTGGAAAATAGAGGTATAGCTGGCGTAGGTCGAc < 2:12856/250‑1 (MQ=255) actgactgTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTTCTTCCGGGGGTAGGTGTACCGGTGGGCTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGGGGGGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCCGCTCGTAG‑TTGTTACCGGTGATTGGGGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGCTGGGAAATAGAGGGATAGATGGCGTTGGGCGAcc > 1:8685/1‑251 (MQ=255) actgactgTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAG‑TTGTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGCTGGAAAATAGAGGTATAGCTGGCGTAGGTCGAc < 1:218221/250‑1 (MQ=255) gactgTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAG‑TTGTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGCTGGAAAATAGAGGTATAGCTGGCGTAGGTCGACCAg < 1:258812/250‑1 (MQ=255) cACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAG‑TTGTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGCTGGAAAATAGAGGTATAGCTGGCGTAGGTCGACCAGTTGTCATTGATGt < 1:33244/251‑1 (MQ=255) cGCC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAG‑TTGTTACCGGTGATTGGAGCCAGAGATTTGCCTGAACTGTCACGATCATTTTGCGGCTGGAAAATAGAGGTATAGCTGGCGTAGGTCGACCAGTTGTCATTGATGTCAAACACCAGACCAGCGTa < 1:171723/250‑1 (MQ=255) gCC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAG‑TTGTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGCTGGAAAATAGAGGTATAGCTGGCGTAGGTCGACCAGTTGTCATTGATGTCAAACACCAGACCAGCGTa > 1:44477/1‑249 (MQ=255) ggtgctgcCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAG‑TTGTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGCTGGAAAATAGAGGTATAGCTGGCGTAGGTCGACCAGTTGTCAGTGATGTCAAACACCAGACCAGCGTAAGGCg < 2:303167/249‑1 (MQ=255) gcCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAG‑TTGTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGCTGGAAAATAGAGGTATAGCTGGCGTAGGTCGACCAGTTGTCATTGATGTCAAACACCAGACCAGCGTAAGGCgtgtt < 1:362515/249‑3 (MQ=255) ccGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAG‑TTGTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGCTGGAAAATAGAGGTATAGCTGGCGTAGGTCGACCAGTTGTCATTGATGTCAAACACCAGACCAGCGTAAGGCgtggtgtg > 1:444356/1‑251 (MQ=255) cGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAG‑TTGTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGCTGGAAAATAGAGGTATAGCTGGCGTAGGTCGACCAGTTGTCATTGATGTCAAACTCCAGACCAGCGTAAGGCgtggtgtgg < 1:4239/251‑1 (MQ=255) gggATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAG‑TTGTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGCTGGAAAATAGAGGTATAGCTGGCGTAGGTCGACCAGTTGTCATTGATGTCAAACCCCAGACCAGCGTAAGGCGTGGTGTGGtt > 2:335267/1‑251 (MQ=255) | GCCAGTTAACACCACCGCCGACCGTCAACTCTGGCATGACAGGCAACCGATAGCTGGTGAACATTTTAACCGTGGTGCGTGGCAGATTAGGATTAACGGCGTTTCCTTCGTTATCCTCTGCAATATAGCGCGTTGCGCCAAATGTCAGCTGCCAGTTGTCGGTAATTGCGCCGTTGAGTTCAAATTCCACCCCTTTACTGACTGTCCCATCCACCGCTTTATAGGCGG‑TTTCGCC‑GTTGCTGCCGGGGATAGGTGTACCGGTGGACTGAGCGACATTATCCTGCTCAATACGGAAGATGGCTAACGTGGTGGTCAGACGGCTATTCATCCAGTCCGATTTCAGACCCAGCTCGTAG‑TTGTTACCGGTGATTGGAGCCAGATATTTGCCTGAACTGTCACGATCATTTTGCGGCTGGAAAATAGAGGTATAGCTGGCGTAGGTCGACCAGTTGTCATTGATGTCAAACACCAGACCAGCGTAAGGCGTGGTGTGGTT > NC_000913/1159589‑1160084 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |