Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 3,166,114 Δ7,312 bp [ygiS][ygiN] [ygiS], mqsA, mqsR, ygiV, ygiW, qseB, qseC, ygiZ, mdaB, [ygiN]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3166114 3173425 7312 71 [0] [0] 71 [ygiS]–[ygiN] [ygiS],mqsA,mqsR,ygiV,ygiW,qseB,qseC,ygiZ,mdaB,[ygiN]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 31661130 (0.000)71 (1.200) 70/494 0.0 100% coding (1606/1608 nt) ygiS putative deoxycholate binding periplasmic protein
?NC_000913 3173426 = 0 (0.000)coding (285/315 nt) ygiN putative quinol monooxygenase YgiN

CCATCACCAATAAACGGCAACGCACGGTCCATGATCACGTACATGGAGTAGTTTAAGTAGGCGTTTTCCGTAAATTCATGTAGCGCAAGGCGCTCTGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAATGTGCCTTGATATACAACTCTTTGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGCGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTAAGGCGTCATACTGCGCATTTTTCCAGTGACCGACGTTTTCTTCA  >  NC_000913/3165864‑3166363
                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                          
ccATCACCAATAAACGGCAACGCACGGTCCATGATCACGTACATGGAGTAGTTTAAGTAGGCGTTTTCCGTAAAGTCATGTAGCGCAAGGCGCTCTGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCAGCCGGACGTGCTCCGACGGCGATAAAGGCATCAg                                                                                                                                                                                                                                                           <  2:38075‑M1/251‑2 (MQ=255)
        aaTAAACGGCAACGCACGGTCCATGATCACGTACATGGAGTAGTTTAAGTAGGCGTTTTCCGTAAATTCATGTAGCGCAAGGCGCTCTGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccg                                                                                                                                                                                                                                                   <  1:392156‑M1/251‑10 (MQ=255)
                   aCGCACGGTCCATGATCACGTACATGGAGTAGTTTAAGTAGGCGTTTTCCGTAAATTCATGTAGCGCAAGGCGCTCTGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtcttctgcagc                                                                                                                                                                                                                                        >  2:437084‑M1/1‑231 (MQ=255)
                     gCACGGTCCATGATCACGTACATGGAGTAGTTTAAGTAGGCGTTTTCCGTAAATTCATGTAGCGCAAGGCGCTCTGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgggcttgtcagacgacggatg                                                                                                                                                                                                                                       >  2:339517‑M1/1‑229 (MQ=255)
                                 aTCACGTACATGGAGTAGTTTAAGTAGGCGTTTTCCGTAAATTCATGTAGCGCAAGGCGCTCTGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcc                                                                                                                                                                                                                          >  2:318272‑M1/1‑217 (MQ=255)
                                 aTCACGTACATGGAGTAGTTTAAGTAGGCGTTTTCCGTAAATTCATGTAGCGCAAGGCGCTCTGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcc                                                                                                                                                                                                                          <  1:8640‑M1/251‑35 (MQ=255)
                                  tCACGTACATGGAGTAGTTTAAGTAGGCGTTTTCCGTAAATTCATGTAGCGCAAGGCGCTCTGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcct                                                                                                                                                                                                                         >  1:456229‑M1/1‑216 (MQ=255)
                                         cATGGAGTAGTTTAAGTAGGCGTTTTCCGTAAATTCATGTAGCGCAAGGCGCTCTGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgt                                                                                                                                                                                                                  >  2:86254‑M1/1‑209 (MQ=255)
                                                 agtTTAAGTAGGCGTTTTCCGTAAATTCATGTAGCGCAAGGCGCTCTGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccgg                                                                                                                                                                                                          >  2:47304‑M1/1‑201 (MQ=255)
                                                  gtTTAAGTAGGCGTTTTCCGTAAATTCATGTAGCGCAAGGCGCTCTGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggc                                                                                                                                                                                                         >  1:320740‑M1/1‑200 (MQ=255)
                                                       aGTAGGCGTTTTCCGTAAATTCATGTAGCGCAAGGCGCTCTGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcc                                                                                                                                                                                                    >  1:114434‑M1/1‑195 (MQ=255)
                                                       aGTAGGCGTTTTCCGTAAATTCATGTAGCGCAAGGCGCTCTGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCAACAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcc                                                                                                                                                                                                    <  2:168355‑M1/251‑57 (MQ=255)
                                                        gTAGGCGTTTTCCGTAAATTCATGTAGCGCAAGGCGCTCTGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcct                                                                                                                                                                                                   <  2:304689‑M1/251‑58 (MQ=255)
                                                         tAGGCGTTTTCCGTAAATTCATGTAGCGCAAGGCGCTCTGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctg                                                                                                                                                                                                  >  2:390048‑M1/1‑193 (MQ=255)
                                                            gCGTTTTCCGCAAATGCATGTAGCGCAAGGCGCTCTGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgacc                                                                                                                                                                                               <  2:381421‑M1/251‑62 (MQ=255)
                                                             cGTTTTCCGTAAATTCATGTAGCGCAAGGCGCTCTGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccg                                                                                                                                                                                              >  1:43185‑M1/1‑189 (MQ=255)
                                                                 ttCCGTAATTTCATGTAGCGCAAGGCGCTCTGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggc                                                                                                                                                                                           <  1:273791‑M1/250‑66 (MQ=255)
                                                                       aaaTTCATGTAGCGCAAGGCGCTCTGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttc                                                                                                                                                                                    >  2:451107‑M1/1‑179 (MQ=255)
                                                                       aaaTTCATGTAGCGCAAGGCGCTCTGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttc                                                                                                                                                                                    <  1:437084‑M1/251‑73 (MQ=255)
                                                                        aaTTCATGTAGCGCAAGGCGCTCTGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttct                                                                                                                                                                                   <  2:193854‑M1/251‑74 (MQ=255)
                                                                         aTTCATGTAGCGCAAGGCGCTCTGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctt                                                                                                                                                                                  <  2:313454‑M1/251‑75 (MQ=255)
                                                                            cATGTAGCGCAAGGCGCTCTGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcc                                                                                                                                                                               >  1:260676‑M1/1‑174 (MQ=255)
                                                                               gTAGCGCAAGGCGCTCTGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctt                                                                                                                                                                             <  2:454602‑M1/250‑80 (MQ=255)
                                                                                tAGCGCAAGGCGCTCTGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttccttt                                                                                                                                                                            >  2:132014‑M1/1‑170 (MQ=255)
                                                                                    gcAAGGCGCTCTGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacc                                                                                                                                                                       >  1:423302‑M1/1‑166 (MQ=255)
                                                                                     cAAGGCGCTCTGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGAGCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAACGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttccttgaaacct                                                                                                                                                                      >  2:209081‑M1/1‑165 (MQ=255)
                                                                                                gtcatATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGGCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaagctccgc                                                                                                                                                            <  1:294542‑M1/248‑97 (MQ=255)
                                                                                                gCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgcc                                                                                                                                                           >  1:154925‑M1/1‑154 (MQ=255)
                                                                                                     atCGCTCATTAATTCTGATGCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGGGTCACAGGAGATCAGCGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttcttgcctttaaacctcaatctccgccatgtc                                                                                                                                                      <  1:342632‑M1/251‑103 (MQ=255)
                                                                                                           cATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcct                                                                                                                                                  <  2:41229‑M1/249‑107 (MQ=255)
                                                                                                                  tCTGATTCCCCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACGACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttccttgaaacctcaatctccgccatgtcgcctttctcttg                                                                                                                                          <  2:355434‑M1/250‑115 (MQ=255)
                                                                                                                    tGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGCTCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgca                                                                                                                                        >  1:198962‑M1/1‑134 (MQ=255)
                                                                                                                            cAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagtt                                                                                                                                 <  1:353515‑M1/249‑124 (MQ=255)
                                                                                                                               cTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggc                                                                                                                            >  1:405792‑M1/1‑123 (MQ=255)
                                                                                                                                      gCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttc                                                                                                                     >  1:33019‑M1/1‑116 (MQ=255)
                                                                                                                                      gCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttc                                                                                                                     <  1:318272‑M1/251‑136 (MQ=255)
                                                                                                                                           ccTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGGGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagc                                                                                                                <  2:358976‑M1/251‑141 (MQ=255)
                                                                                                                                               cAAAGGGGCAATATTGCCGGAGATACTACCTTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgttt                                                                                                            >  1:382558‑M1/1‑107 (MQ=255)
                                                                                                                                                        aaTATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccag                                                                                                   <  1:316060‑M1/251‑154 (MQ=255)
                                                                                                                                                           atTGCCGGAGATGCTACATTCTCTGCCGCGTCTAGGCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGAAGGCGATAAAGGCATCAgaataaccgtattctgcgtccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccagcag                                                                                                <  2:37078‑M1/251‑157 (MQ=255)
                                                                                                                                                           atTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGAGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaacgaattctgcagccagggatttaatcctgccttgtttgcccggccatcctgacagggcactgttctttcctttaaacctccatctccgccatgtcgcctttctcttgcaaccagttgcggcgctcttccgagcgtttcttcgccagc                                                                                                  >  2:421358‑M1/1‑95 (MQ=255)
                                                                                                                                                            ttGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGCGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccagcagc                                                                                               >  2:79936‑M1/1‑94 (MQ=255)
                                                                                                                                                                 ggAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccagcagcatatc                                                                                          <  1:102042‑M1/251‑163 (MQ=255)
                                                                                                                                                                    gaTACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccagcagcatatccat                                                                                       <  2:154925‑M1/251‑166 (MQ=255)
                                                                                                                                                                      tactacATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccagcagcatatccatc                                                                                      >  2:40263‑M1/1‑84 (MQ=255)
                                                                                                                                                                           cATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgcccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgctcttccgagcgtttcttcgccagcagcatatccatcatcgcg                                                                                >  1:31507‑M1/1‑79 (MQ=255)
                                                                                                                                                                              tATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGCGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccagcagcatatccatcatcgcgtc                                                                              >  2:237809‑M1/1‑76 (MQ=255)
                                                                                                                                                                                 cTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggacatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccagcagcatatccatcatcgcgtcagt                                                                           >  1:264995‑M1/1‑73 (MQ=255)
                                                                                                                                                                                   gCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccagcagcatatccatcatcgcgtcagtacg                                                                        <  2:320740‑M1/251‑181 (MQ=255)
                                                                                                                                                                                      gcgTCGAGGCACAGGAGATCAACGTGAATAGCGCCGCCGGCCGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgccgccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccagcagcatatccatcatcgcgcccgtacgctg                                                                     >  2:14059‑M1/1‑68 (MQ=255)
                                                                                                                                                                                          cGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccagcagcatatccatcatcgcgtcagtacgctgatcg                                                                 <  2:276825‑M1/251‑188 (MQ=255)
                                                                                                                                                                                            aGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccagcagcatatccatcatcgcgtcagtacgctgatcgtc                                                               <  1:328797‑M1/251‑190 (MQ=255)
                                                                                                                                                                                               cacaGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccagcagcatatccatcatcgcgtcagtacgctgatcgtcttc                                                            <  2:164469‑M1/251‑193 (MQ=255)
                                                                                                                                                                                               cacaGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccagcagcatatccatcatcgcgtcagtacgctgatcgtctt                                                             <  1:314446‑M1/250‑192 (MQ=255)
                                                                                                                                                                                                acaGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccagcagcatatccatcatcgcgtcagtacgctgatcgtcttc                                                            >  2:353230‑M1/1‑58 (MQ=255)
                                                                                                                                                                                                           aCGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccagcagca                                                                                              <  2:176723‑M1/205‑159 (MQ=255)
                                                                                                                                                                                                           aCGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccagcagca                                                                                              >  1:176723‑M1/1‑47 (MQ=255)
                                                                                                                                                                                                            cGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccagcagcatatccatcatcgcgtcagtacgctgatcgtcttcatcatcgatagtc                                               <  1:350598‑M1/251‑206 (MQ=255)
                                                                                                                                                                                                                aaTAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccagcagcatatccatcatcgcgtcagtacgctgatcgtcttcatcatcgatagtcaact                                           <  1:386746‑M1/251‑210 (MQ=255)
                                                                                                                                                                                                                   aGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccagcagcatatccatcatcgcgtcagtacgctgatcgtcttcatcatcgatagtcaactgc                                         <  1:182901‑M1/250‑212 (MQ=255)
                                                                                                                                                                                                                   aGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccagcagcatatccatcatcgcgtcagtacgctgatcgtcttcatcatcgatagtcaactgc                                         >  1:88768‑M1/1‑39 (MQ=255)
                                                                                                                                                                                                                       ccgccgGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccagcagcatatccatcatcgcgtcagtacgctgatcgtcttcatcatcgatagtcaactgcacc                                      >  2:101162‑M1/1‑35 (MQ=255)
                                                                                                                                                                                                                         gccgGACGTGCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccagcagcatatccatcatcgcgtcagtacgctgatcgtcttcatcatcgatagtcaactgcaccagac                                  <  1:187124‑M1/251‑219 (MQ=255)
                                                                                                                                                                                                                                  gCTCCGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccagcagcatatccatcatcgcgtcagtacgctgatcgtcttcatcatcgatagtcaactgcaccagacggcgagtg                          <  1:188633‑M1/250‑227 (MQ=255)
                                                                                                                                                                                                                                   cgccgaCGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccagcagcatatccatcatcgcgtcagtacgctgatcgtcttcatcatcgatagtcaactgcaccagacggcgagtgtt                        <  2:110080‑M1/249‑229 (MQ=255)
                                                                                                                                                                                                                                      cGACGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccagcagcatatccagcatcgcgtcagtacgctgatcgtcttcatcatcgatagtcaactgcaccagacggcgagtgttcgg                     <  2:412474‑M1/251‑232 (MQ=255)
                                                                                                                                                                                                                                         cGGCGATAAAGGCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccagcagcatatccatcatcgcgtcagtacgctgatcgtcttcatcatcgatagtcaactgcaccagacggcgagtgttcggatc                  <  1:36746‑M1/251‑235 (MQ=255)
                                                                                                                                                                                                                                             gATAAAGGCATCAtaataaccgtatcctgcagccggggatttaatcctgccttgtttgcccgtccatcctgaccgggcaatgttctttcctttaaacctcattctccgccatgtcgcctttctcttgcaaccagttgcggcgatctgccgagcgtttcttcgccagcagcatatccatcatcgcgccagtacgctgatcgtcttcatcatcgagagtcaactgcaccagacgtcgcgtgttcggatcaagc              <  2:15868‑M1/251‑239 (MQ=255)
                                                                                                                                                                                                                                                   ggCATCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccagcagcatatccatcatcgcgtcagtacgctgatcgtcttcatcatcgatagtcaactgcaccagacggcgagtgttcggatcaagcgtggtt        <  1:237809‑M1/251‑245 (MQ=255)
                                                                                                                                                                                                                                                      aTCAgaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccagcagcatatccatcatcgcgtcagtacgctgatcgtcttcatcatcgatagtcaactgcaccagacggcgagtgttcggatcaagcgtggtttcg     <  1:8851‑M1/251‑248 (MQ=255)
                                                                                                                                                                                                                                                         agaataaccgtattctgcagccagggatttaatcctgccttgtttgcccggccatcctgaccgggcaatgttctttcctttaaacctcaatctccgccatgtcgcctttctcttgcaaccagttgcggcgatcttccgagcgtttcttcgccagcagcatatccatcatcgcgtcagtacgctgatcgtcttcatcatcgatagtcaactgcaccagacggcgagtgttcggatcaagcgtggtttcgcgc  >  2:216818‑M1/1‑1 (MQ=255)
                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                          
CCATCACCAATAAACGGCAACGCACGGTCCATGATCACGTACATGGAGTAGTTTAAGTAGGCGTTTTCCGTAAATTCATGTAGCGCAAGGCGCTCTGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAATGTGCCTTGATATACAACTCTTTGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGCGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTAAGGCGTCATACTGCGCATTTTTCCAGTGACCGACGTTTTCTTCA  >  NC_000913/3165864‑3166363

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.