| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,604,344 | 0 | C | T | 30.8% | 55.5 / 16.0 | 40 | S62F (TCT→TTT) | bglJ | DNA‑binding transcriptional regulator BglJ |
| Reads supporting (aligned to +/- strand): ref base C (4/23); new base T (12/0); total (17/23) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.65e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
AGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCG‑TACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAGATTTTTCATCAGGAACTCTTTTTGTCATTAAATGGTGTACGTCAGGCGACCGACCGACTGAACAAT > NC_000913/4604104‑4604588 | aGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑CTTTTTTTTTTTTTTGcc > 2:359544/1‑251 (MQ=255) ggTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTTTTTTTCTGCCATGAGAAgg > 1:543286/1‑250 (MQ=255) gCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑AAtttttctttttttggcctgtggagtggg > 1:353226/1‑234 (MQ=255) gCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACAAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCATttttt‑tttttcttcccttaggaatg > 2:358123/1‑236 (MQ=255) gagaACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTTTTTTTTTGCCATTAGTAGTGAgcgcc > 2:189941/1‑250 (MQ=255) taacttGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTTTTTTTTTTCCCTGAGAAGGGAGCGCAGAGAggg > 1:335910/1‑251 (MQ=255) gagaTGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAAc < 1:82745/251‑1 (MQ=255) agaTGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACt < 1:271849/251‑1 (MQ=255) aTGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTTTTTTTTTTCCCTGAGAAGGGAGCGCCGAGAGGGGTTATCTTGCCTGACTGAACTgg > 1:117415/1‑251 (MQ=255) gCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCg < 2:409213/251‑1 (MQ=255) cGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑At < 1:56097/251‑1 (MQ=255) acgcaGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCcgc < 1:339044/248‑1 (MQ=255) cGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCG‑TACCCg < 2:6360/251‑1 (MQ=255) gaAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCG‑TACCCGGCGTTTAGTTAtt < 1:379019/251‑1 (MQ=255) cACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGGC‑ATTTTTTTTTTTTCTGCCCTGAGAAGGGAGCGCAGAGAGGGGATATCTTGCCTGTCTGAACTGGGGGATAAATTTTCC‑CG‑TACACCGCGTTTTGTTATTTCggggggt > 2:514897/1‑246 (MQ=255) cATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTTTTTTTTTTCCATGTGAAGGGAGCGGCGAGTGGGGTTATCTTGTCTGACTCAAATGGCG‑AGTAAATTTCCGCG‑TAACCGGCGTTTAggtttttcgggtggtgat > 2:34348/1‑233 (MQ=255) aTGAGTGGTATCGGTATTGAGAGTGTATTCAGAGAGTTTACGGGTAGCCCTGTTAAGCTCCATTCCTAGACTAGTCAGGAGTCATGTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTGCTGTTACTGCCATGAGAGGTGAGCGCAGAGAGGAATTATCTTGCCTGACTGAACTGGCG‑ATTAAGGTTCCGCG‑TACCCGGCGTTTAGTTATTGAGGATGATGATATTGTAGCTCGGCTGag < 2:406321/251‑2 (MQ=255) aTGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTTTTTTTTTTCCATGAGGAGAAAGAGACGAGAGGGAGTATTTTTCCTGACCGAAATGGCG‑GTTAAATTTCCGCGGAACCACGCGTTT‑GTTTATGCGGATGATGAAATTGAAACCCGGCTgct > 2:583258/1‑249 (MQ=255) agtagtATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTTTTTTTTTTGCATGAGAAGGGAGCCCAGAGGGGGATTATCTTGCCTGACAGTAAAGGGG‑AGTAAGTTTTCGCG‑CACCCGGCGGTTCTTTTTTGCGgatgattaaattgtaagcgcgctgggttg > 2:614939/1‑228 (MQ=255) gagTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTCTTTTTCTGCCATGGGAAGGGGGCGCAGAGAGGGATTATCTTGCCTGACTGAAATGGCG‑ATTTAGGTTCCGCG‑TACCCGGCGTTTTGTTATTGCGGGTGATGATATTGAAGCTCGGCTGATTGGTTTATTGTCGCCATCAc > 1:603499/1‑251 (MQ=255) aTTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTTTTTTTCTGCCATTAGAAGGGGGCGCAGAGAGGGGTTATCTTTCCTGACTGAACTGGGG‑ATTTAGGTTCCGCG‑GAACCCGCGTTTTGTTTTTGCGGGTGGTGATATTGAAGCTCCGCTGATTTGTTCATTTTTGCCATCaaccccgg > 2:185769/1‑244 (MQ=255) cGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCG‑TACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGt < 1:143367/251‑1 (MQ=255) tAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCcg < 1:237/157‑1 (MQ=255) aaCCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCG‑TACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAg < 1:448108/250‑1 (MQ=255) aaCCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCG‑TACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGc < 2:335910/251‑1 (MQ=255) cccTTATAATCTCCATTCCTATACCATTCAGGAGTCATTTCAGGGTGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGACAGGGATTATCTTGCCTGACTGAACTTGCG‑ATTAAGTTTCCGCG‑TACCCGGCGTTTAGGTATTGCGTATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGt < 2:245671/251‑1 (MQ=255) ccTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑CTTTTTTCTTTTTCTTCCATTGGAAGTGAGGGACGGGAGGGATTTTCTTTCCTGACTGTACTGGCG‑ATTAAGTTTTCGAG‑TATCCGGGGGTTTGTTATTTCGGATGGTGATATTGAAGCTCGGGGGATTGGTTCTTTGTGTCCATCAACGCTGGTGGGGGGATTAAGTAAAgag > 2:97860/1‑247 (MQ=255) ccATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCG‑TACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTTGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGgag < 1:156791/250‑1 (MQ=255) ccATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCG‑TACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGgag < 2:543286/250‑1 (MQ=255) ccTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCG‑TACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAGAttttt < 1:185769/251‑1 (MQ=255) ataCCAGTCAGGAGTTATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCG‑TACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAGATTTTtc < 2:185375/249‑1 (MQ=255) ataCCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCG‑TACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAGATTTTtcat < 1:359544/251‑1 (MQ=255) cAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCG‑TACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGc < 1:339090/225‑1 (MQ=255) gAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGGC‑ATTTTTTTTTTTTCTGCCATGAGAAGTGAGCGCGGAGAGGGGTTATCTTTCCTGTCTGGACTGGCG‑GTTAAGTTTCCGCG‑TACCCGGCGGTTTGTTTTTGCGGATGATGGTATTGTAGCTCGGCGGGTTTGTTCATTTTTGCCCTCCCCGCTGGACGGGGTGTTAAGTAAAGAGGCAACGCTGGGGGTTTTTTATCAGGAACTCtt > 2:48535/1‑251 (MQ=255) aGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCG‑TACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAGATTTTTCATCAGGAACTCttt < 2:117415/251‑1 (MQ=255) gTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑CTTTTTTCTTTTTTTGCCCTGGGGAGTGAGGGCAGAGAGGGGTTTTTTTTCCTGACTGAACTGGCG‑GTTAAGTTTCCGCG‑TACCCGGCGGTTTGTTATTGCGGATGATGATATTTAAGCTCGGCTGGTTGGTTCATTTTCGCCATCACCGCTGGACGGGGGATTAAGTAAAGCGGCAACGCTGGAGAGTTTTCTTCAGGAACTCtttt > 1:376631/1‑251 (MQ=255) gATGCCATGTCGCGGATCTCGTATGCGGCGGTC‑TATTTTTATTTTTTTGCCCAGAGAAGGGAGCGCAGAGAGGGATTATCTTGCCTGACTGGACTTGCG‑CTTAAGGTTCCGCGGTACC‑GGCGTGTAGGTATTGCGGGTGGTGGTATTGAAGCCCGGCTGATTGGTTCATTGTCGCCATCACACCCGGGCGGGGCTTTTAGTAAAACGGCAAAGCCGGAGAGTTTTCATCAGGAAACCTTTTTTTCACTaa > 1:624568/1‑250 (MQ=255) cATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCG‑TACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAGATTTTTCATCAGGAACTCTTTTTGTCATTAAATGgtg < 1:358123/251‑1 (MQ=255) gcgGATCTCGTTTGCGGCGGTC‑ATTTTTTTTTTTTTTGCCCTGAGAAGTGAGCGCCGAGAGGGATTATCTTTCCTGACTGAAATGGCG‑GTTAAGTTTTCGCG‑TACCCGGCGGTTTGTTTTTTCGGGTGATGATTTTTAAGCTCGGCTGGTTgggtcttttttgccatc > 1:442134/1‑153 (MQ=255) gcgGATCTCGTTTGCGGCGGTC‑ATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCG‑TACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATc < 2:442134/168‑1 (MQ=255) gtctcGTTTGCGGCGGTC‑ATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCG‑TGCCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCATCGCGGGAGATTTTTCATCAGGAACTCTTTTTGTCATTAAATGGTGTACGTCAgtc < 1:589056/250‑3 (MQ=255) tttttgCTTTTTCTGCCCTGAGACGAAAGCGCAGAGAGGAATTATCTTGACTGTCTGAACTGGCG‑ATCAAGTTTCCGCG‑TACCCGGCGTTTAGTAATTGCGGATGATGATATTAAAGCTCGGCTGATTGGTTAATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCGACGCTGGAGATTTTTCATAAGGCACTCTTTTTGTCATTAAATGGTGTACGTCAGGAGCCCGACCGACTTAACagt > 2:137379/1‑249 (MQ=255) | AGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTC‑ATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCG‑ATTAAGTTTCCGCG‑TACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAGATTTTTCATCAGGAACTCTTTTTGTCATTAAATGGTGTACGTCAGGCGACCGACCGACTGAACAAT > NC_000913/4604104‑4604588 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |