Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,206,435	0	C	T	30.0%	57.5 / 10.2	40	intergenic (‑179/‑28)	ttdR/ttdA	DNA‑binding transcriptional activator Dan/L(+)‑tartrate dehydratase subunit alpha
Reads supporting (aligned to +/- strand):  ref base C (5/23);  new base T (12/0);  total (17/23)
Fisher's exact test for biased strand distribution p-value = 1.11e-06
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

CCCGCTGTGAACGATTTCTACCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAA‑TA‑CAA‑AAA‑CTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGA‑C‑AGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGA‑TGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTC  >  NC_000913/3206194‑3206676                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                         cccGCTGTGAACGATTTCTACCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACaaa                                                                                                                                                                                                                                                  <  1:220471/250‑1 (MQ=255)              aTTTCTACCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCAGTGAATTTTTCCAGACAAA‑TA‑CAA‑AAA‑CTGGAg                                                                                                                                                                                                                                <  2:216554/251‑1 (MQ=255)               tttCTACCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAACAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCACACAAA‑‑A‑CAACAAA‑CTgta                                                                                                                                                                                                                                 >  2:374355/1‑247 (MQ=255)                      cAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAA‑TA‑CAA‑AAA‑CTGGAGTTGCCatg                                                                                                                                                                                                                        <  1:510819/251‑1 (MQ=255)                      cAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGGTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAA‑TA‑CAA‑CAA‑CTGGAGTTGCCatg                                                                                                                                                                                                                        <  2:280414/251‑1 (MQ=255)                             tGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCATTATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAA‑TA‑CAA‑AAA‑CTGGAGt                                                                                                                                                                                                                               <  1:354507/237‑1 (MQ=255)                                         gCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAA‑TA‑CAA‑AAA‑CTGGAGTTGCCATGATGAGCGAAAGTAATAAGc                                                                                                                                                                                                     <  1:593138/251‑1 (MQ=255)                                            aaaGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATCTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAA‑TA‑CAA‑AAA‑CTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAc                                                                                                                                                                                                  <  1:564278/251‑1 (MQ=255)                                                                cGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCCTACAAA‑AA‑AAA‑AAA‑ATGGAGTTTGCATGATTAGGGAAAATAATAAACaaaaagcaggggaaaagttgaa                                                                                                                                                                               >  2:447541/1‑230 (MQ=255)                                                                                  gtgATAAGCGCAGTGTATTACGCAAAACATTGCCATTCCCTGCGCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACTAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAA‑TA‑CAA‑AAA‑CTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGA‑C‑AGAGATTGTCGCTAACttt                                                                                                                                                          <  1:343744/251‑1 (MQ=255)                                                                                     aTAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAA‑TA‑CAA‑AAA‑CTGGAGTTTCCATGATGAGCGAAAGTAAAAAACAACAGGCAGGGAATAAATTGA‑C‑AGAGATTGTCGCTAACttttcc                                                                                                                                                       >  1:17185/1‑248 (MQ=255)                                                                                                                   cATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGAGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGTTGATTTTTTCCAGAAAAA‑TA‑CAA‑AAA‑CTGGATTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGA‑C‑AGAGATTGTCGCTATCTTTACCGCCATGATTTCTACCCGAATGCCTGATGAc                                                                                                                         <  1:412948/251‑1 (MQ=255)                                                                                                                    aTTCCCTGCTATGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGAAAAA‑TA‑AAA‑AAA‑CAGGAGTTGGCATGATGGGCGAAAGGAATAATCAAAAAGCAGTGGATAAGTTGA‑C‑AGAGATTGTTGCTAACTTTTCCGCCATGATTTTTACCCCAATGCCtgatga                                                                                                                          >  1:61159/1‑249 (MQ=255)                                                                                                                             tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAA‑TA‑CAA‑AAA‑CTGGAGTTGCCATTATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGA‑C‑AGAGATTGTCGCTAACTTTACCGCCATGATTTCTCCCCGAATCGCTGCAGACGTGGTGGAt                                                                                                                >  2:100106/1‑250 (MQ=255)                                                                                                                             cagggCGCAATATTCATTTTTATTTTCGCGTTGATTAACGAACTGTTAATTACATATTCATGGTGGAAAAAAATATAAAACCACATTTTTAGTGGTAGTTGGTGGCGGTGAATTTTTCCAGAAAAA‑AA‑CAA‑AAA‑CGGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGA‑C‑AGAGATTGTAGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATa                                                                                                               <  2:62568/248‑1 (MQ=255)                                                                                                                                 gcgcAATATTCATTCTTTTTTTCGAGTGTAATCTCGAACTGTTAATTACATATTCACGGTGAAAAAAAATAAAAAACCACATTTTGAGGGGTAGTTTTGGGCGGTGAATTTTTCCAGAAAAA‑TT‑CAA‑AAA‑CTGGAGTTGCCATGATGAGCAAAATTAATAAGCAACGGGCTTGGAATAGTTTGA‑C‑AGAGATTGTCGCGAACTTTCCCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAAcg                                                                                                           <  2:578267/251‑2 (MQ=255)                                                                                                                                 gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAA‑AA‑AAA‑AAA‑ATGGAGTTGCCATGATGAGGGAAAGAAAAAAGCAACAAGAAGGGAAAAAGTTGA‑A‑AGAGATTGTCGCTAACTTTACCCCCATGATTTTTAACCGAAATCCTGATGACGTGGGGGAGaaaat                                                                                                           >  1:318180/1‑249 (MQ=255)                                                                                                                                 gcgaaaTATTCATTCTTATTTTCGCTTTTATTCACGAACTGTTAATTAAATATCCACGGGGGCAAAAAATAAAAAACCACATTTTTAGTGGTAGTTTGGGGCGGTAAATTTTCCCAGACAAA‑AA‑AAA‑AAA‑GGGGAGTGGCAATGAGGAGCAAAAGTAATAAGCAACAGGCAGTAAATAAGTGGA‑C‑AGAGTTTGTCGCTAATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACt                                                                                                           <  2:166426/247‑1 (MQ=255)                                                                                                                                   gcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAA‑AA‑AAA‑AAA‑ATGGAGTTGCCCTGATGAGCGAAAGGAATAAAAAAAAGAAAGGGAAAAAGATTA‑C‑AGAGATTGTCGCTTAATTTTCCGCCCTAATTTTTAACCGAATGCCTGATGACgtgggggggaaaata                                                                                                          >  1:227718/1‑239 (MQ=255)                                                                                                                                    cAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAAACAAA‑AA‑AAA‑AAA‑ATGGGGGTGGCATGGTTGGGGGAAGGAATAAACAAAAAGCAGTGAATAAAATGA‑C‑AAAGATTGTCGCCAAATTTATCGCCATGATTTTTACCCCAATGCCtgatgaaggggggggtaaaataa                                                                                                         >  1:456598/1‑233 (MQ=255)                                                                                                                                           cattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTTAGACAAA‑AA‑CAA‑AAA‑CTGGAGGTGCCATGATTGGAGAAAGAAAAAAGAAACAAGCAGTGAATAAATTGA‑CCAG‑GATTGTCGATTAATTTACCGCCATGATTTTTACCCGAATGCCTCATGACGGGGTGGGTAAACCAAAACaact                                                                                                  >  1:318031/1‑247 (MQ=255)                                                                                                                                                  aTTTGCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAA‑TA‑CAA‑AAA‑CTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGA‑C‑AGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGA‑t                                                                                          <  1:113718/250‑1 (MQ=255)                                                                                                                                                     ttCGCGTTGATTCACGAACTTTTAATTACATATTCACGGGGGCAAAAAATAAAAAACCACATTTTTAGTGGGAGTTTGGGGGGGTAAATTTTTCCAGAAAAA‑TA‑CAA‑AAA‑CTGGAGTTGCCATGATGAGGGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGA‑C‑AGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGA‑TGcc                                                                                       <  2:17185/250‑1 (MQ=255)                                                                                                                                                      tCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGAAAAA‑TA‑CAA‑AAA‑CTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGA‑C‑AGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGA‑TGCCg                                                                                      <  1:447541/250‑1 (MQ=255)                                                                                                                                                       cgcgTTGATTCACGAACTGTTAATTACATATTTACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAA‑TA‑CAA‑AAA‑CTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGA‑C‑AGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGA‑TGCCGa                                                                                     <  1:123339/250‑1 (MQ=255)                                                                                                                                                          gtttaTTCCCGAACTGTTAATTACATATTCACGGTGTCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAA‑TA‑CAA‑AAA‑CTGGAGTTGCCATGATGAGCAAAAGTAATAAGCAACAGGCAGTAAATAATTTGA‑C‑AGAGTTTTTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGA‑TGCCGAAAcg                                                                                 <  1:621/247‑1 (MQ=255)                                                                                                                                                              aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGATTTTTTCATACAAAATA‑‑AA‑AAA‑CTGGAGTTGCCAAGATGAACGGAAGTGATAAACAACAAGGAGGGAATAAGATGG‑A‑AGAGATTGGCGCTAACTTTTCCGCCCTGGATTCTTCCCCAAAGCCTGATGTAGTGGGGGGAAAACAAAAACAGACAAAGGA‑TGccagaaagtcgg                                                                             >  1:272672/1‑241 (MQ=255)                                                                                                                                                              aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGAGAATTTTTTCAAACAAA‑AA‑CAA‑AAA‑ATGGAGTTGGCATGATGAGGGGAAATAATAAAAAACAGGCAGGGAAAAAGTTGA‑A‑AGAGATTGTTTCTAAATTTAACCCCATGATTTTTACCCGAATGCCCGTTTAAGGGGGGGATAAACTAAAAAAGCTAAAGGA‑AGCCGAAAcgtcgg                                                                             >  1:602314/1‑250 (MQ=255)                                                                                                                                                                           tAATTACATATTCGCGGTGCCAAAAAATATAAAACCAAATTTTTAGGGGTAGTTTGTGGGGGTGAATTTTCCCAGACAAA‑TA‑AAA‑AAA‑CTGGAGTGGCCATGATGAGCGAAAGTAATAAGCAACGGGCGGTGAATAAGTTGA‑C‑AGGGATTGTCGCTATCTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGA‑TGCCGAAACGTCGTCGATGGGGaaaa                                                                 <  1:268476/250‑1 (MQ=255)                                                                                                                                                                                   tatTGACGGTGGCAAAAAATATAAACCCACATTTTTAGTGGTATTTGGTGGGGGTAATTTTTTCCAGACAAA‑TA‑CAA‑AAA‑CGGGAGTTGCAATGAGGAGAGAAAGAAATAAGCAACAGTCAGTGAAAAAGTGGA‑C‑AGAGATTGGGGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGA‑TGCCGAAACGTCGTCGATGGGGAAAATTATCTAc                                                         <  2:626716/250‑1 (MQ=255)                                                                                                                                                                                    atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAA‑TA‑CAA‑AAA‑CTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGA‑C‑AGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGA‑TGCCGAAACGTCGTCGATGGGGAAAATTATCTACCa                                                       <  1:277819/251‑1 (MQ=255)                                                                                                                                                                                             ggCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGATTTTTTCCGACCAA‑AA‑AAA‑AAA‑CCGGGGATGTCCTGAGGAGGGGAAGGAATAAACAACAAGGAGGGAAAAAAATGG‑C‑AGAGGTTTTCGCTAAATTTACCGCCATGATTTTTATCCGAAAGGCTGGGGGCGTGGTGGTTAAAATAAAACAGCTAAAGGAGAGCGGAAAGGT‑GTCGATGGGGGAAATTATCTACCATaacatgat                                              >  1:307320/1‑244 (MQ=255)                                                                                                                                                                                                      tataAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCA‑ACAAA‑AAACAA‑AAA‑ATGGAGTTGCCATTATGAGCGGAAGTAAAAAACAACAAGCAGGGAATAAATTGA‑C‑AGAGATTGTCGCTAACTTTTCCCCCCTGATTTTTACCCGAAAGCCTGATGACGGGGTGGATAAAATAAAACAGCTAAAAGA‑GGCCGAAAAGGCGTCGATGGGGGAAATTATCTACCATACGATGTTCGacaaca                                      >  1:258352/1‑250 (MQ=255)                                                                                                                                                                                                        aaaaaCCACATTTTGAGTGGTGGTGTGGGGCGGTGAATTTTTCCAGAAAAA‑TA‑AAA‑AAT‑GTGGAGGTGCAAGGATGAGGGAAAGTAATAAGCAACGGGCAGTGAAAAAGTTGA‑G‑AGAGATTGTCCGGAAGGGGAAAGAAAGGAGGGAGAAAAGAATGCCTGATGACGTGGTGGAGAAACTAAAACAGCTAAAGGA‑TGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGc                                   <  1:215305/250‑1 (MQ=255)                                                                                                                                                                                                         aaaaCCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAAACAAA‑TA‑AAA‑AAAACTGG‑GTTTCCCTGATGAGCGGAAATAATAAACAACAAGCAGTGAAAAAATTGA‑C‑AGAGAATGTCGCCAACTTTTCCCCCCTGATTTTTTCCCCAAAGCCTGATGACGGGGGGGGTAAACTAAAAAAACTAAAGGA‑TGCCGAAACGACGTCGATGGGGAAAATTATTTACCATAAGATGTTCGacaacaagc                                   >  1:364920/1‑247 (MQ=255)                                                                                                                                                                                                           aaCCACATTTTTAGTGGTAGTTTGTGGCGGTGCATTTTTCCAGACACA‑TA‑AAC‑AAA‑ATGGTGTTGCCATGAAGAGAGGAAAAAATAAAAAACCGGCAGTGAAAAAAATCA‑C‑AGAGATTGTTGCTAACATTACCCCCCTGCTTTTTTACCGAATGCCTCATGACGTGGTGGGTAAACTAAAAAAACCAAAGGA‑AGCCGAAAAGTCCTCGATGGGGGAAATTATATACCAAACGATGTTCGGCAAAATgaca                                 >  1:553358/1‑247 (MQ=255)                                                                                                                                                                                                                       aGTGGTAGTTGGGGGCGGTAAATTTTTCCAAACAAA‑‑A‑CAA‑AAAACGGGAGTTGCCATGATGAGTAAAAGTAATAACCATCGGGTAGTGAATAA‑TTGAAC‑AGAGATTGTCGCTACTTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGAGAAACTAAAACAGCTAAAGGA‑TGCCGAAACGTCGTCGATGGGGAAAATTATCTCCCATACGATGTTCGACAACATGCAAAAAGCGATTGAc                     <  2:98912/250‑1 (MQ=255)                                                                                                                                                                                                                                        gTGAATTTTTCCAGACAAA‑TA‑CAA‑AAA‑CTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGA‑C‑AGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGA‑TGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGt   >  1:213331/1‑251 (MQ=255)                                                                                                                                                                                                                                            aTTTTTCCAGACAAA‑TA‑CAA‑AAA‑CTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGA‑C‑AGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGA‑TGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTc  >  2:570223/1‑248 (MQ=255)                                                                                                                                                                                                                                            aTTTTTCCAGACAAA‑TA‑AAA‑AAA‑CTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTAAATAATTTGA‑C‑AGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGA‑TGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTc  <  1:570223/248‑1 (MQ=255)                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                         CCCGCTGTGAACGATTTCTACCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAA‑TA‑CAA‑AAA‑CTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGA‑C‑AGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGA‑TGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTC  >  NC_000913/3206194‑3206676

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑