| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,135,781 | 0 | G | T | 30.0% | 82.3 / 14.4 | 51 | R197R (CGC→CGA) | pitB | metal phosphate:H(+) symporter PitB |
| Reads supporting (aligned to +/- strand): ref base G (10/25); new base T (15/0); total (25/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.90e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CAGTTCAGGATGCTGTTGCAGGTAGTGTTCGAAGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAC‑GTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTG‑AATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCA‑GGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGGTGTGCGAACTGGAGGCCGGTAAACCG > NC_000913/3135532‑3136030 | cAGTTCAGGATGCTGTTGCAGGTAGTGTTCGAAGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAC‑GTTTGCCTTTTTTCTTTTTGc < 1:451374/251‑1 (MQ=255) gTTCAGGATGCTGTTGGAGGTAGTGTTCGAAGTTTGTAACGGCAGCGCGGGTGCGGGTAATTGCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCAGTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAC‑GTTTGCCGTTGTTCTTTTTACGa < 2:137797/251‑1 (MQ=255) gTTGCAGGTAGTGTTCGCAGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAA‑GTTTGTCTTTTTTTTTTTTTCGATCTTCCCGAATg > 1:387730/1‑251 (MQ=255) cGAAGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAC‑GTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTG‑AATACGGTc < 1:16873/250‑1 (MQ=255) aaGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAC‑GTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTG‑AATACGGTCACg < 2:505225/251‑1 (MQ=255) aGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTCTACCGTTTGC‑TTTTTTTTTTTTTTGATCTTcctgcaagagggtgatacgtgccagc > 2:327995/1‑227 (MQ=255) tAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCCTTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGCATGGCGGTTTAC‑GTTTGCCTTTTTTTTTTTTTCTATCTTCCGGAATGCGGTG‑GAAACGGTTACGCtttttt > 2:520359/1‑250 (MQ=255) gcgGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAC‑GTTTGCCTTTTTTCTTTTTGCGGTCTTCCGGGATGCGGTG‑AATACGGTCACGCTTTTTCTTCCCCCTcc > 1:322967/1‑251 (MQ=255) gggtaATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAC‑GGTTGCCTTTTTTCTTTTTTCGATCTTCCGGAATGCGGTG‑AATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGt > 1:73009/1‑251 (MQ=255) aTAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAC‑GTTTGCCTTTTTTTTTTTTTCGATCTTCCGGAATGCGGGG‑AAAAAGGTCACGCTTTTTTGTCCCGCTCCCGTAGCGTCGCAGCA‑ggg > 1:403117/1‑250 (MQ=255) atatTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAC‑GTTTTCCTTTTTTCTTTTTTCGCTCTTCCCGAATGCGGTG‑AATACGGGCACGCTTTTTCTTCCCCCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CCGGCCCCCCGc > 2:113455/1‑251 (MQ=255) tGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAACCGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAC‑GTTTGCCTTTTTTCTTTTTTCGATCTTCCCGAATGCGGGG‑AATACGGTCAAGCTTTTTCGTTCCGCTCCCGTAAAGTCGCAACA‑GGGATAT‑CAGGCCTCCCGCact > 1:36747/1‑248 (MQ=255) aaGCCAGTAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAACCAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAC‑ACTTGCCCTTTTTCCTTTTTCCATCCTCCGGAATGCGGTGGATTACGGCCA‑GCTTTTTTGTCCCGCTTCCGTAGCCGAGCAGCC‑GGAATAT‑ctgggccccccccaagacccggcc > 2:394616/1‑228 (MQ=255) ccAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCAGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTTC‑GTTTGTCTTTTTTTTTTTTGCGATCTTCCGGAATGCAGGG‑AATACGGTCAAGCTTTTTCGGTCCGCTCCAGTAGAGTCTGAGCT‑GGGATAT‑CAGGCATCCCggaaaggacaggccgcg > 1:486236/1‑235 (MQ=255) ccAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTGTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAC‑GTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTG‑AATACGGTCACGCTTTGTCGTCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCcgac < 2:538514/251‑1 (MQ=255) cagcagGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGCTTAC‑GTTTGCCTTTTTTCTTTTTTCGCTCTTCCGGGATGCGGTG‑GATACGGTCACGCATTTTCGTCCCCCTCCAGTAGCGTCGCAGCC‑GGAATAT‑CCAGCCTCCCGCaaagcacaagccgacg > 2:211225/1‑237 (MQ=255) aaTCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGGTTAC‑GTTTGCCTTTTTTCTTTTTTCGATCTTCCGGAATGCGGGG‑GATACGGTCACGCTTTTTCGTCCCCCCCCCGTAGCGTCCCCGCA‑GGAATAT‑CAGGCCCCCCGCCATTACCAAGCCCACGCCAGGGGac > 2:508676/1‑249 (MQ=255) ccaccaGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAC‑GTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTG‑AATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATc < 1:354122/251‑1 (MQ=255) aCCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAC‑GTTTGCCTTTTTTCTTTTTTCGATCTTCCGGGATGCGGGG‑AATACGGTCACGCTTTTTCGTCCCGCCCCCGTAGCGGCGCAGCA‑GGGATATTCAG‑CCTCCCCCCATGACCAAGCCGACGATAGGGGGAACAAACAGCggggg > 1:52604/1‑247 (MQ=255) ccAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAC‑GTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTG‑AATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCCGACGATAGGGTAAACAATCAGCgaggag < 1:102947/251‑1 (MQ=255) ccAGAATTACCAGGCCGATCCCTGTTTGTCCGTCGTTCGAGCCGGGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATGCGCGTCCAGAATGGCGGTTTAC‑GTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTG‑AATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCgaggag < 2:246353/251‑1 (MQ=255) tACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAC‑GTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTG‑AATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑tt < 1:292686/250‑1 (MQ=255) aCCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAC‑GTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTG‑AATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑tttt < 1:445249/251‑1 (MQ=255) aCCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAC‑GTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTG‑AATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑ttt < 1:113455/250‑1 (MQ=255) ccGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTTC‑CGTTGCCTTTTTTTTTTTTTCGATCTTCCGGGATGCGGTG‑AATACGGTCACGCTTTTTTGTTCCGCCCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAAAGACCAGGCCCACCAAAGGGGAAACAATCAGCCAGGGGAAAA‑TTTTTGTCAc > 1:369815/1‑251 (MQ=255) gATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGACACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGATTAC‑GTTTGCCCTTTTTCTTTTTGCGATCTTCCCGAATGCGGGG‑AATACGGTCCCGCTTTTTCGGCCCGCTCCAATAGCGGCGCACCATGGAA‑AT‑TACGCCGCCCCCCATTACCAAGCCCACCCGAGGGGTAAAAATCAGCGAGGAGAAAA‑TTTTGGTCACtt > 2:44335/1‑251 (MQ=255) aTCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTTC‑GGTTGCCTTTTTTCTTTTTTCGATCTTCCGGAATGCGGTG‑ACTAAGGTCCCGCTTTTTTGTTCCGCTCCCGTAGCGGCGCAGCA‑AGAATAT‑CAGGCCCCCCCCCAAGACCCGGCCGCCGGTAGGGGAAACAAACCGCGAGGAGAAAAATTTTgaccaatt > 2:322397/1‑244 (MQ=255) gTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAC‑GTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTG‑AATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCA‑GGttt < 1:104940/251‑1 (MQ=255) gtcggtcgCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAC‑GTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTG‑AATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCA‑GGTTTAACg < 2:198610/251‑1 (MQ=255) ccgtTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATTCGCGTCCAGAATGGCGGTTTAC‑GTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTG‑AATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCA‑GGTTTAACGc < 2:328203/250‑1 (MQ=255) cgtTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAC‑GTTTTCCTTTTTTCTTTTTTCGGTCTTCCGGAATGCGGGG‑AATACGGTCCCGCTTTTTTGTCCCGCCCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCCCCCGCAATGACCAGGCCGGCCATAGGGGAAACAATCAGCGAGGGGAAAA‑ATTTGGGCAATTCACGCATGGTTTaagc > 1:16567/1‑248 (MQ=255) cgcCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAC‑GTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTG‑AATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCA‑GGTTTAACGcatccatc < 2:73009/251‑1 (MQ=255) cGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAC‑GTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTG‑AATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCA‑GGTTTAACGCATCCATCAcc < 2:381606/251‑1 (MQ=255) gCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTTC‑GGTTGCCCTTTTTCTTTTTGCGATCTTCCGGAATGCGGTG‑AATAAGGGCACGCTTTTTCGTCCCGCCCCAGTAGCGTCGCAGCA‑GGAAAAT‑CAGGCCTCCCGCCATGACCAGGCCCACGATAGGGGGAACAATAAGCGAGGAGAAAA‑TTTTGGTCACTTCACCCC‑GGTTTAACACCACCATCACCgc > 2:27058/1‑249 (MQ=255) gCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAC‑GTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTG‑AATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCA‑GGTTTAACGCATCCATCACCGAt < 1:387770/251‑1 (MQ=255) aaCGCCACGCCGGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAC‑GTTTGCCTTTTTTCTTTTGGCGATCTTACGGAATGCGGTG‑AATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGGCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCA‑GGTTTAACGCATCCATCACCGATGAGcc < 2:346124/251‑1 (MQ=255) ccacgccCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATTGCGGTTTAC‑GTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTG‑AATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCA‑GGTTTAACGCATCCATCACCGATGAGCCGGtt < 1:113955/251‑1 (MQ=255) cacgccCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAC‑GTTTGCCTTTTTTCTTTTTTCGATCTTCCGGAAAGCGGTG‑AATACGGTCACGCTTTTTCGTCCCCCCCCAGTAGAGTCGCAGCA‑GGAAGAT‑CAAGACCCCCGCAATAACCAGGCCGACGGAAAGGGAAACAATCAGCGAGGAGAAAA‑ATTTGGGCCCGTCACGCC‑GGGATAACGCACACATCCCCGACGAGCCCGtt > 2:327054/1‑250 (MQ=255) gccCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAC‑GTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTG‑AATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCA‑GGTTTAACGCATCCATCACCGATGAGCCGGTTAACa < 1:189448/251‑1 (MQ=255) aaTCAGCGCAATACGCGTCCAGAATGGCGGTTTAC‑GTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAAAGCGGGG‑AATAAGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTTGGCACTTCAAGCA‑GGTTTAAAGCATCCATCACCGATGAGCCGGGTAACAACGCGTTGGTTaaa > 1:452731/1‑250 (MQ=255) aGCGCAATACGCGTCCAGAATGGCGGTTTAC‑GTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTG‑AATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCA‑GGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGAt < 1:350732/251‑1 (MQ=255) cgTCCAGAATGGCGGTTTAC‑GTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTG‑AATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCA‑GGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAGCCGATGCCGATAATCg < 2:497120/251‑1 (MQ=255) ggTTTAC‑GTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTG‑AATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCA‑GGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGgt < 1:401280/251‑1 (MQ=255) tttAC‑GTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTG‑AATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCA‑GGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGgtgt > 2:501483/1‑251 (MQ=255) aC‑GTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTG‑AATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCA‑GGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGGTGTGCg > 1:360496/1‑251 (MQ=255) tGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTG‑AATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCA‑GGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGGTGTGCGAACt < 1:547587/250‑1 (MQ=255) ccTTTTTTCGTTTTGCGATCTTCCGGAATGCGGTG‑AATACGGTCACGCTTTTTCGGCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCATGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCA‑GGTTTAACGCATCCATCACCGATGAGCCTGTTAACAGGGCGTTGGTTAAACCGATGCCGATAATCGCGCCAATCAAGGTGTGCGAACTGGa < 2:514538/251‑1 (MQ=255) cTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTG‑AATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCA‑GGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGGTGTGCGAACTgg > 2:263777/1‑249 (MQ=255) cTTTTTTCTTTTTGCGATCTTCCGGAATGCGGGG‑AATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCA‑GGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGGTGTGCGAACTgg > 1:625434/1‑249 (MQ=255) ttCTTTTTGCGATCTTCCGGAATGCGGTG‑AATACGGTCACGCTTTTGCGTCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCA‑GGTTTAACGCATCCATCACCGATGAGCCGGTTAAAAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGGTGTGAGAACTGGAGGcag < 1:592663/250‑3 (MQ=255) tttGCGATCTTCCGGAATGCGGTG‑AATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCA‑GGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGGTGTGCGAACTGGAGGCCGGTAAAc > 1:72376/1‑251 (MQ=255) gCGATCTTCCGGAATGCGGTG‑AATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCA‑GGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGGTGTGCGAACTGGAGGCCGGTAAACCg < 1:520359/250‑1 (MQ=255) | CAGTTCAGGATGCTGTTGCAGGTAGTGTTCGAAGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAC‑GTTTGCCTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTG‑AATACGGTCACGCTTTTTCGTCCCGCTCCAGTAGCGTCGCAGCA‑GGAATAT‑CAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAACAATCAGCGAGGAGAAAA‑TTTTGGTCACTTCACGCA‑GGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGGTGTGCGAACTGGAGGCCGGTAAACCG > NC_000913/3135532‑3136030 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |