| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,466,540 | 9636 bp→ACCC | intS–[ypdJ] | 15 genes intS, yfdG, yfdH, yfdI, yodE, yfdK, yfdM, yfdN, yfdO, yfdP, yfdQ, yfdR, yfdS, [yfdT], [ypdJ] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2466540 | 2476175 | 9636 | 39 [0] | [0] 41 | intS–[ypdJ] | intS,yfdG,yfdH,yfdI,yodE,yfdK,yfdM,yfdN,yfdO,yfdP,yfdQ,yfdR,yfdS,[yfdT],[ypdJ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2466539 | 0 (0.000) | 39 (0.500) +ACCC |
38/486 | 0.6 | 100% | intergenic (+156/‑6) | argW/intS | tRNA‑Arg/prophage CPS‑53 integrase |
| ? | NC_000913 | 2476176 = | 0 (0.000) | coding (304/306 nt) coding (83/141 nt) |
yfdT ypdJ |
protein YfdT putative uncharacterized protein YpdJ |
|||||
AGCCTAGAGGTTCGAGACGATATTGAGCGCCGTGCTTATGAAATCGCACTCGTATCTCTGGAAGTAGAGCCAGATGAACGCGAAGCCTATGAATTATTCATGGAAAAGCGTTTCGGTGACTTAGTAGATCGTCGGAGAGCAAAAAACGGCGATAACGAATACATGGCATGGGATATGACTCTCGGTTGGATCATCTGGCAGCAACGAGCTGGTATCCATTTTTCAACAATGTCACAACAAGAGGTGAAATAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTAAAACCTTCATCTATGACCGGATTAAGTCAGGCGACCTGCCAAAAGCC > NC_000913/2475927‑2476426 | cctcatgccgcattgtcctcttagttaaatggatataacgagcccctcctaagggctaattgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggatacaataattttacccaccggattttacccTa < 2:352101‑M2/2‑1 (MQ=255) atgccgcattgtcctcttagttaaatggatataacgagcccctcctaagggctaattgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATag < 1:622417‑M2/6‑1 (MQ=255) ttagttaaatggatataacgagcccctcctaagggctaattgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAgcctaac > 1:401404‑M2/230‑248 (MQ=255) agttaaatggatataacgagcccctcctaagggctaattgcaggttcgagtccttcaggggactccatgtatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatgtttctcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataatttgaccgaccggattttgcccTGATAGAGCCATACAGCCTCacac < 2:484535‑M2/24‑1 (MQ=255) atggatataacgagcccctcctaagggctaattgcaggttcgattcctgcaggggacgccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATg < 1:575991‑M2/30‑1 (MQ=255) taacgagcccctcctaagggctaattgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTc > 2:63425‑M2/215‑234 (MQ=255) taacgagcccctcctaagggctaattgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTc < 1:63425‑M2/20‑1 (MQ=255) aacgagcccctcctaagggctaattgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGt > 1:403909‑M2/214‑251 (MQ=255) gagcccctcctaagggctaattgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTc > 2:204959‑M2/211‑249 (MQ=255) cccctcctaatggctaattgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtcccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGttt < 1:540065‑M2/44‑1 (MQ=255) agggctaattgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAat > 2:203981‑M2/199‑250 (MQ=255) aattgcagtttcgattcctgcaggtgacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcattgacagccgcacgccatgtcgggtaaaaagtggataaagtaagtgtacccactggatttgacccTAATAGAGCCATACAGCCTCACTCTCGATGAGGTCTGTCAGTTTCTTAAAATAGCCTGa < 2:189217‑M2/59‑1 (MQ=255) tgcaggttcgattcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATc < 1:345420‑M2/61‑1 (MQ=255) attcctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCg > 1:143995‑M2/180‑251 (MQ=255) cctgcaggggacaccatttatcagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTc < 1:428036‑M2/74‑1 (MQ=255) cagttcgctcccatccgtcccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCt < 2:365595‑M2/96‑1 (MQ=255) cagttcgctcccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGGATTTTTATTACCt > 2:303091‑M2/156‑251 (MQ=255) cccatccgtaccagtccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGc > 1:425440‑M2/147‑249 (MQ=255) cagtccgcaaaatcccctgcatatcaagcatcccgtagatttacagtacgtcatggaccgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccgaattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGGCAGTTTCTTAAAATATCCTGAGCTACCATCGCCGTCATAGAGCGTATTTTTATTTCCGGATTTGCATGTTCGATtcca < 2:53356‑M2/116‑2 (MQ=255) ccgcaaaatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTAtt > 1:586426‑M2/132‑251 (MQ=255) aatcccctgaatatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTTCTTTTCAGGTTCGATTCCCTATTCgg > 2:594‑M2/126‑248 (MQ=255) tatcaagcattccgtagatttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATg > 1:562444‑M2/115‑251 (MQ=255) ttacagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCt < 1:594‑M2/155‑1 (MQ=255) acagttcgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATCACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACGACAGCCTGAt > 2:374645‑M2/94‑251 (MQ=255) cgtcatggttcgcttcagatcgttgacagccgcactccatgacgggtaacaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTg > 1:549751‑M2/88‑251 (MQ=255) gttcgcttcagatcgttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGAtt < 1:294645‑M2/171‑1 (MQ=255) gttgacagccgcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTTATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGTTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATg < 2:528917‑M2/185‑1 (MQ=255) tgacagccgcactccatgacgggtaaaaagtggataaaataattttaccctccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCAGCATgg < 1:344608‑M2/186‑1 (MQ=255) gcactccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTTCCATCGCCTTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCGCTGGTTGATTTGAAATTCATCATGGCTGATACTg < 1:455032‑M2/195‑1 (MQ=255) ccatgacgggtaaaaagtggataaaataattttacccaccggattttacccTACTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGCGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCttt > 1:515785‑M2/52‑251 (MQ=255) catgacgggtaaaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTg < 2:277990‑M2/201‑1 (MQ=255) cgggtaaaaagtggataaaataattttacacaccggcttttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCTTAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAATTTCATCATGGCTGATACTGGCTTTCGTaa > 2:381992‑M2/46‑250 (MQ=255) aaaagtggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTAAAACCTTc < 1:388961‑M2/212‑1 (MQ=255) ggataaaataattttacccaccggattttacccTAATAGAGCCATACAGCCGCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCTCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATGCGGAGATATCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTAAAACCTTCATCTAt < 2:401404‑M2/218‑1 (MQ=255) ttttaccaaccggattttacccTAATAGAGCAATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGCAATTCATCATGGCTGATACTGGCATTGGTAAAACCTTCATCTATGACCGGATTa > 2:148752‑M2/23‑250 (MQ=255) cccaccggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCGTAAAAGATCCTGATCTACCATCGCCGTCATAGAGCGTAGTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATACATCATGGCTGATACTGGCGTTGGTAAAACCTTCATCTATGACCGGATTAAGTCAg < 2:577895‑M2/234‑1 (MQ=255) cggattttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTAAAACCTTCATCTATGACCGGATTAAGTCAGGCGAc < 2:143995‑M2/239‑1 (MQ=255) ttttacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTAAAACCTTCATCTATGACCGGATTAAGTCAGGCGACCTGc > 1:341865‑M2/9‑251 (MQ=255) tacccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTAAAACCTTCATCTATGACCGGATTAAGTCAGGCGACCTGCCa < 1:174262‑M2/245‑1 (MQ=255) acccTAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTAAAACCTTCATCTATGACCGGATTAAGTCAGGCGACCTGCCaa < 1:25582‑M2/246‑1 (MQ=255) taataGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGGATTTTTATTACCTGATTTGCAGGATCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGCAATTCATCATGGCTGATACTGGCTTTGGTAAAACCTTCATCTATGACCGGATTAATTCAGGCGACCTGCCAAAAGcc > 1:109094/1‑251 (MQ=255) | AGCCTAGAGGTTCGAGACGATATTGAGCGCCGTGCTTATGAAATCGCACTCGTATCTCTGGAAGTAGAGCCAGATGAACGCGAAGCCTATGAATTATTCATGGAAAAGCGTTTCGGTGACTTAGTAGATCGTCGGAGAGCAAAAAACGGCGATAACGAATACATGGCATGGGATATGACTCTCGGTTGGATCATCTGGCAGCAACGAGCTGGTATCCATTTTTCAACAATGTCACAACAAGAGGTGAAATAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCCTGATCTACCATCGCCGTCATAGAGCGTATTTTTATTACCTGATTTGCAGGTTCGATTCCCTATTCGGAGATAGCACTCATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTAAAACCTTCATCTATGACCGGATTAAGTCAGGCGACCTGCCAAAAGCC > NC_000913/2475927‑2476426 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |