| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,336,901 | 0 | T | A | 24.1% | 112.8 / 12.1 | 58 | Y44F (TAT→TTT) | adiC | arginine:agmatine antiporter |
| Reads supporting (aligned to +/- strand): ref base T (33/11); new base A (0/14); total (33/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.39e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GGTTAATACCAATGGATCTTTCAGAATCGGGAAGAAGTAACTTAAATATCCTACGCCAATGACCACCATGGCGATATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGG‑CCAAA‑GCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGTCGAGG‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCC‑GACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGTCATATCATACGCCTGCATTCGATAGTTGAATTATTATCGACCGGGTTATCGCTGATGCCGTTAT > NC_000913/4336654‑4337139 | ggTTAAGACCAATGGATCTGTCAGAATCGGGAAGAAGAAACTTAAATATCCTACGCCAATGACCACCATGGCGATATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTGTGATAACCGAGAAACGGG‑CCAAA‑GCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGTCGAGG‑AACGACATTTT‑GGCGTATACCAGCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑ATCCATaa < 2:215996/250‑1 (MQ=255) caaTACCAATGGATCTTTCAGAATCGGGAAGAAGTAACTTAAATATCCTACGCCAATGACCACCATGGCGATATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGG‑CCAAA‑GCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGTCGAGG‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑ATCCATAAATg < 2:495525/249‑1 (MQ=255) aaTACCAATGGATCTTTCAGAATCGGGAAGAAGTAACTTAAATATCCTACGCCAATGACCACCATGGCGATATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGG‑CCAAA‑GCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGTCGAGG‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑ATCCATAAATgg < 1:49667/250‑1 (MQ=255) aCCAATGGATCTTTCAGAATCGGGAAGAATTACCTTAAATATCCTACGCCAATGACCACCATGGCGATATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGG‑CCAAA‑GCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGTCGAGG‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCCCCGA‑TAATCGTCACCAACC‑ATCCATAAATGGCaa < 2:311490/250‑1 (MQ=255) aaTGGATCTTTCAGAATCGGGAAGAAGTAACTTAAATATCCTACGCCAATGACCACCATGGCGATATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGG‑CCAAA‑GCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGTCGAGG‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCCCCAACC‑ATCCATAAATGGCAATccc > 1:165673/1‑251 (MQ=255) tGGATCTTTCAGAATCGGGAAGAAGTAACTTAAATATCCTACGCCAATGACCACCATGGCGATATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGG‑CCAAA‑GCAGCGGCGGGCGGAAGCGTAAGAACCACCAGGACTTGGGTCGAGG‑AACGACATTTT‑GGCGGATACCATCGAAAGCCCACG‑TGAACCGA‑TAATCGACACCAACC‑ACTCATAAATGGCAATACCGc > 2:95388/1‑251 (MQ=255) gATCTTTCAGAATCGGGAAGAAGTAACTTAAATATCCTACGCCAATGACCACCATGGCGATATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGG‑CCAAA‑GCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGTCGAGG‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCACCGC‑TAATCGTCACCAACC‑ATACATAAATGGCAATCCCGccc > 2:509230/1‑250 (MQ=255) tttCAGAATCGGGAAGAAGTAACTTAAATATCCTACGCCAATGACCACCATGGCGATATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGCAACGGG‑CCAAA‑GCAGCGGCGGGCGTTAGCATTAAAACCACCCGGACTTGGGTCGAGG‑GACGACGATTT‑GACGGATACCATCGAGAGACCCAC‑GGCACCAG‑TAATCGTCCCCAAAA‑ACACATAAAAGGCAATcccccccgta > 2:246144/1‑243 (MQ=255) ttCAGAATCGGGAAGAAGTAACTTAAATATCCTACGCCAATGACCACCATGGCGATATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGG‑CCAAA‑GCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGTCGAGG‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑CTCCATAAAAGGCAAACCCGcccgt > 2:67948/1‑245 (MQ=255) gggAAGAAGTAACTTAAATATCCTACGCCAATGACCACCATGGCGATATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGG‑CCAAA‑GCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGTCGAGG‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGtt > 1:263862/1‑251 (MQ=255) aaaatttccaaccccaacgtccaccaTGGCGATATTCCCGACCCAGCAGGCCAGCAAGTGGAGGACGTTGTTTTGATACGCGGGAAGCGGG‑CAAAG‑GCAGGGGCGGGCGTAGGCGTAAGAACCACCAAGCTTTGGGTCGAGA‑AACG‑CATTTTTGTCGTAGACCAACGAGAGCCCCCG‑TCCCGCGA‑TAATGGTACCCACCC‑ATCCATAAATGGAAACCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGa < 1:246144/230‑1 (MQ=255) aaaaTATCCCCCGCCAATGCCCCCCATGGCGATATTGCCGATCCAGCAGCCCAGCCAGTAGAGGACTTTGGTTTAAAACCCGAAAAACGGG‑CAAAA‑GCGGGGGCGGGCGAAAGCGTAAGACCCACCAGGACTTGGGTCGAGG‑AACGACATTTT‑GGCGTATACCAGCAAGCGCCCCAG‑TGCACCGA‑TATTCGTCTCAAACC‑ATCCATAAATGGCAACCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGaa < 1:424951/250‑1 (MQ=255) aaaTATCCTACGCCAATGACCACCATGGCGATATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGG‑CCAAA‑GCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGTCGAGG‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGaa > 1:523317/1‑250 (MQ=255) aaaTATCCTACGCCAATGACCACCATGGCGATATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGG‑CCAAA‑GCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGTCGAGG‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGaa > 1:291932/1‑250 (MQ=255) atatCCTACGCCAATGACCACCATGGCGATATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGG‑CCAAA‑GCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGTCGAGG‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGaaaa > 1:246884/1‑250 (MQ=255) atatCCTACGCCAATGACCACCATGGCGATATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGCTGGTTTGATAACCGAGAAACGGG‑CCAAA‑GCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGTCGAGG‑AACGACATTTT‑GGCGGATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGCGGCCAGGTTTGCAGGTAACAGaaaa > 1:107119/1‑250 (MQ=255) aaTGACCACCATGGCGATATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGT‑CCAAA‑GCAGCGGCGGGCGTAAGCGCAAGAACCACCAGGACTTGGGTCGAGG‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAAGCCAGGTTTGCAGGTAACAGAAAAACACCTGAcccc > 1:10896/1‑250 (MQ=255) atgccgtcgtgggcgttatggcagATCCAGCGGGCCAACCAGTAGAGGACGTTGGTGTGATACCCGGGAAACGGG‑CCAAG‑GGAGCGGGGGGGGAAGGCTTAAAACCCCCCAGGACTGGGTTCGGGA‑AACGACATTTG‑GGCGTAACCCAGCGAGACCCCCAG‑TGCCCCGA‑TAACCGCCCCCACCC‑AGCCAAAATTGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCat < 1:170753/228‑1 (MQ=255) aTGACCACCATGGCGATATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGG‑CCAAA‑GCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGTCGAGG‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCat > 1:212716/1‑251 (MQ=255) gACCACCATGGCGATATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGG‑CCAAA‑GCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGTCGAGG‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCata > 1:144277/1‑250 (MQ=255) accaccATGGCGCTATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGG‑CCAAC‑GCAGCGGCGGGCGTACGAGTAAGAACCACCAGGAATTGGGTCGAGG‑CACGACATTTT‑GGCGTATACCATCGAGAGACCCCG‑TGCCCCGA‑TAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCCGTAGAGGCCAGGTTTGCAGGGAACAGAAAAAAAACTGACCCCaaaa > 2:481816/1‑247 (MQ=255) ccaccaGGGCGATATTGCCGATCCGGGAGGCCAGCCAGTAGAGGAGGTTGTTTTGATAACCG‑GAAAGGGGGCAAAA‑GGAGGGGCGGGCTTAGGCGTAAAAACCCCCGGCACTTGGTGCGAGA‑AACCACATTTT‑GGCGTTGTCCATGGAGAGCCCCAG‑‑GGACCGAATAACCATCACCACCC‑CTCCAAAATTGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCataata < 1:530756/251‑1 (MQ=255) accaTGGCGATATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGG‑CCAAA‑GCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGTCGAGG‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCCGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATAtt > 1:485702/1‑251 (MQ=255) gATATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGG‑CCAAA‑GCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGTCGAGG‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCC‑Gac > 1:406080/1‑250 (MQ=255) atggCCGACCCAGCGGGCCAGCCAGTAGAGGACGTTGTTTTGAAAACCGAAAAACGGG‑CAAAA‑GCGGGGGGGGGCGTAAGCGTAAGAACCCCCAGGACTTGGGTCGAGA‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑ACCCATAAAGGGCAACCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCC‑GACAcc < 1:414820/247‑1 (MQ=255) gCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGG‑CCAAA‑GCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGTCGAGG‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCCG‑GGCACCGA‑TAATCGTCACCAACC‑CTCCATAAATGGCAATCCCCCCAGTAAAGGGCAGGTTTGCAGGGAACAGAAAAAAACCTGACCCCATAATATTCCCC‑GACACCacc > 2:553231/1‑248 (MQ=255) agccagTAGAGGACGTTGGTTTGATACCCGAGAAACGGG‑CCAAA‑GCAGCGGCGGGCGTAAGCGTAAAAACCACCAGGACTTGGGTCGAGG‑CACGACATTTT‑GGCGCATACCATCGAGAGCCCCCG‑TGCACCGA‑TAAACGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGACCGGTTAGCAGGGAACAGAAAAACACCCGACACCATAATATTCCCC‑GACACCATCAgggagaaagggattc > 2:448330/1‑238 (MQ=255) agTAGAGGACGTTGGTTTGATAACCGAGAAACGGG‑CCAAA‑GCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGGCGAGG‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGGAAAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCC‑GACACCATCAGGGGGACGGGGGTTAAGccc > 2:330399/1‑251 (MQ=255) ggggaggttgttTTGATAACCGA‑AAAAGGG‑CCAAAAGCGGGGGCGGGCGTAAGCGAAAGAACCCCAAGGACTTGGGCCGGGC‑AACG‑CATTTTTGGTGTATACCAGCGAGAGCCCCAG‑TGCACCGA‑TAACCGGCCCAAACC‑ACCCAAAAAGGACAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCC‑GACACCATCAGGGTGACGGGGATTAAGCCCACtt < 1:508932/245‑1 (MQ=255) agGACGTTGGTTTGATAACCGAGAAACGGG‑CCAAA‑GCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGTCGAGG‑CACGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCCGGGTTGc > 2:333426/1‑179 (MQ=255) gggtgttttgtaacccGAGAAACGGC‑CCAAG‑GCGGCGGGGGGGGAAAGCGAAAGACCCACCGGGACG‑GGGTCGGGGGAAGGACATTGG‑GGCGAACCCCATCGAGACCCCCAG‑TGCGCCGA‑TAACCCACACCAACC‑AACCAAAAAGGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCC‑GACACCATCAGGGTGACGGGGATTAAGCCCCCTTTGTGa < 2:135535/237‑1 (MQ=255) aTAACCGAGAAACGGG‑CCAAA‑GCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGTCGAGG‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCC‑GACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGagcatcagcat > 2:82934/1‑251 (MQ=255) tAACCGAGAAACGGG‑CCAAA‑GCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGTCGAGG‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCC‑GACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGagcatcagcatc > 1:331639/1‑251 (MQ=255) gaAACGGG‑CCAAA‑GCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGTCGAGG‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCC‑GACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGAc > 1:522038/1‑251 (MQ=255) aaaccGGG‑CAAAA‑GCAGGGGCGGGCGTAAGCGTAAGAACCACCGGGCCTTGGGTCGAGG‑AACGACATTTT‑GGCATATACCATCGAGAGCCCCAG‑TGCACCGA‑TAACCGTCCCCACCC‑ATCCAAAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCC‑GACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGAc < 1:174616/247‑1 (MQ=255) agcGGCGGGCGTAAACGTAAGAACACCCACGGCATTGGCCGCGG‑GAAGAAATTTT‑GGCGGATACCATCTAGAGACCCAG‑GGCACCGA‑CAATCGTCACCAACC‑ATCCATAAATGGCAAACCCGCCAGGACAAGGCAGGGTTGCAGGGAACAGAAAAAAACCCGACCCCCTAAAATTCCCCCAACCCCACCGGGGTG‑CGGGGGTTAAGCCCACTTTGTTAGCATCAGCATCCCAAGACATAATTAAACCCCtc > 2:444283/1‑250 (MQ=255) gcggcgGGCGTAAGCGTAAGAACCACCAGGACTTGGGTCGAGG‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCC‑GACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGc > 1:84495/1‑251 (MQ=255) gtgttaagcttaaaAACCACGAGGATTGGGGTAGAGG‑ACCGACATTTG‑GGCGAATACCAGCGAGA‑CCCCAGGTGCCCCAA‑TAATCGCCACCAACC‑AACAATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCC‑GACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGc < 2:406080/247‑1 (MQ=255) aaagACCCACCAGGACTTGGGTCGAGG‑AACGACATTTT‑GGCGTATCCCATCGAGACCCCCAG‑TGCCCCGA‑TAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCC‑GACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTg < 1:136815/250‑1 (MQ=255) gAACCCCCAGGACTTGGGTCGGGG‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCAT‑GGCACCGA‑TAATCGTCCCCAACC‑ACCCAAAAAGGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCC‑GACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACa < 1:315396/251‑1 (MQ=255) accccccaGGGCTTGGTTGGAGG‑AACGAATTTTT‑GGCGTATCCCACCGAGACCCCCAG‑TCCACCAA‑TATTCGTCCCCACCC‑ATCCATAAAGGGCAAGCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCC‑GACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACaa < 1:481816/246‑1 (MQ=255) accaccAGGACTTGGGTCGAGG‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCC‑GACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAAt > 1:173782/1‑251 (MQ=255) ccaccaGGTCTTGGGCCGAGA‑AACGCAATTTT‑GGCTTATCCCATCGAGACCCCCAG‑TGCACCAA‑TAATCGCCACCAACC‑ACCCAAAAATGCCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCC‑GACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATa < 1:95388/251‑1 (MQ=255) ccaccaGGACTTGGGTCGAGG‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTaa > 1:68697/1‑125 (MQ=255) ggACTGGGGTCGAGA‑AACGACTTTTT‑GGCGTATCCCAGCGAGAGCCCCAG‑TGCACCGA‑TAATCGCCACAACCC‑ATCAAAAAAGGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCC‑GACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTAc < 1:444283/251‑1 (MQ=255) tGGGTCGAGG‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGCAAAACACCTGACCCCATAATATTCCCC‑GACACCATCAGGGTGACGGGGCTTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAACCTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGtcat > 2:120308/1‑251 (MQ=255) gggTCGGGG‑AACGACTTTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCCCCGA‑TAACCGTCACCAACC‑ACCCAAAAAGGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGa < 1:540772/117‑1 (MQ=255) gggTCGAGG‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGa > 2:540772/1‑117 (MQ=255) tCGAGG‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCC‑GACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGtcatatc > 2:535201/1‑250 (MQ=255) cGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCC‑GACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGTCATATCATACGCCTg > 2:404493/1‑251 (MQ=255) aaCATTTT‑GTCTTATCCCATCGAGAGCCCCAG‑GGCCCCAA‑TAACCTCCACAACCC‑ATCCAAAAAGGGCAAGCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCC‑GACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGTCATATCATACGCCTGc < 1:162159/250‑1 (MQ=255) tttt‑GGCGTATACCACGGAGGCCCCCAG‑GCCACCAA‑TAACCGCCACCACCC‑ACCAAAAAATGACAACCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCC‑GACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGTCATATCATACGCCTGCAtt < 2:173782/250‑1 (MQ=255) gTATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCC‑GACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGTCATATCATACGCCTGCATTCGATAGtt > 1:245383/1‑251 (MQ=255) agagCCCAAG‑TGCACCGA‑TAATCTCCCCCAACC‑ACCAAAAAAGGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCC‑GACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGTCATATCATACGCCTGCATTCGATAGTTGAATTATTATc < 1:509230/251‑1 (MQ=255) ccccAG‑TGCACCGA‑TAA‑CCTCCCCAACCCATCCAAAAAGGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCC‑GACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGTCATATCATACGCCTGCATTCGATAGTTGAATTATTATCGAcc < 1:553231/251‑1 (MQ=255) agtgacccgaaaaccGTCCCCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCC‑GACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGTCATATCATACGCCTGCATTCGATAGTTGAATTATTATCGACCGGGt < 1:330399/237‑1 (MQ=255) cgaaaaaccccACCAACA‑ATCCAAAAATGGCAAACCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCC‑GACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGTCATATCATACGCCTGCATTCGATAGTTGAATTATTATCGACCGGGTTATCGCt < 2:263862/241‑1 (MQ=255) accaacc‑aTCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCC‑GACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGTCATATCATACGCCTGCATTCGATAGTTGAATTATTATCGACCGGGTTATCGCTGATGCCGttat > 1:36068/1‑251 (MQ=255) | GGTTAATACCAATGGATCTTTCAGAATCGGGAAGAAGTAACTTAAATATCCTACGCCAATGACCACCATGGCGATATTGCCGATCCAGCAGGCCAGCCAGTAGAGGACGTTGGTTTGATAACCGAGAAACGGG‑CCAAA‑GCAGCGGCGGGCGTAAGCGTAAGAACCACCAGGACTTGGGTCGAGG‑AACGACATTTT‑GGCGTATACCATCGAGAGCCCCAG‑TGCACCGA‑TAATCGTCACCAACC‑ATCCATAAATGGCAATCCCGCCAGTAGAGGCCAGGTTTGCAGGTAACAGAAAAACACCTGACCCCATAATATTCCCC‑GACACCATCAGGGTGACGGGGATTAAGCCCACTTTGTGAGCATCAGCATCCGAAGACATAATTAAACTCCTGCGAAGGCGAGCTTCGTGACAATAAATTACGTCATATCATACGCCTGCATTCGATAGTTGAATTATTATCGACCGGGTTATCGCTGATGCCGTTAT > NC_000913/4336654‑4337139 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |