| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,326,450 | 0 | T | G | 28.8% | 124.6 / 10.3 | 59 | G114G (GGT→GGG) | atoB | acetyl‑CoA acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (6/36); new base G (17/0); total (23/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.64e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAAT‑CCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTG‑AAATGCAGGATGAACTGGCGCTACATTCACAGCGTAAAGCGGCAGCCGCAATTGAGTCCGGTGCTTTTACA > NC_000913/2326200‑2326699 | cGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGt < 2:391276/251‑1 (MQ=255) tAAAGCAGACATTGAACGGGCAAAAATCGAGTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAat < 2:556265/250‑1 (MQ=255) cATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑Ag < 1:82019/251‑1 (MQ=255) tGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGcc < 1:523586/250‑1 (MQ=255) gAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGcccc < 1:472608/251‑1 (MQ=255) aaCGTGCAAAAATCGATTCACAACACGTTGATGACGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGGAAAAAT‑GAGGTT‑AGccccc > 1:90724/1‑251 (MQ=255) aaCGTGCAAAAAGCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGccccc < 1:85016/251‑1 (MQ=255) tGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGGTGGAAAAGAT‑GGGGTT‑TGCGCCCtact > 2:327418/1‑251 (MQ=255) gCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGCCCCCtact < 1:17214/250‑1 (MQ=255) gCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGCCCCCtact < 1:338578/250‑1 (MQ=255) aaaaaaTCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGCCCCCtactta < 2:200348/250‑1 (MQ=255) aaaaaTCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGCCCCCtacttac < 1:40187/251‑1 (MQ=255) aaaaaTCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGGTT‑AGCCCCCtacttac > 1:78702/1‑251 (MQ=255) aaacGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGTCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTTTGCGGATTCACGGTCAATAAATTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTACTCg < 1:532433/248‑1 (MQ=255) cacaACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGAAAATAT‑GAGGTT‑AGCCCCCTACTTACTCGATGCaaa > 1:108700/1‑250 (MQ=255) acGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGAAAATAT‑GAGTTT‑AGCCCCCCACTTACTCGATGCCAAAGAACGc > 1:394879/1‑251 (MQ=255) cGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGGAAAAAT‑GAGTTTTGGCCCCCAACT‑ACTCGATGCAAAAACACGcc > 1:499521/1‑250 (MQ=255) gaAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGTTGGGAAAAAT‑GAGGTT‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGttt > 1:450863/1‑250 (MQ=255) gATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGAAAATAT‑GGGTTT‑AGGCCCCTACTTACTCGATGCAAAAACAAGCTCTGGCTATTGTc > 1:6251/1‑251 (MQ=255) gggTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGgag < 1:46956/251‑1 (MQ=255) gggTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGga < 2:290868/250‑1 (MQ=255) aaCGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACg < 1:366199/250‑1 (MQ=255) aaCGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACg < 1:489047/250‑1 (MQ=255) gtTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGAGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGGACATATTGA‑TTT‑TGCCCCCTACTTACTCGATGCAAAAGAACACACTGGGTATCATCTTgaagtcggcaagg > 2:508479/1‑239 (MQ=255) gggCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGt < 1:451626/251‑1 (MQ=255) cAAAATCCGGCGCGTCAGGCACGGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTG‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAAT‑CCTgcg < 2:247435/251‑1 (MQ=255) aaaTCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAAT‑CCTGcgcg < 2:72868/251‑1 (MQ=255) gTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGACAATAT‑GAGTTT‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTTGTTTTCGTCTTTGAGACGGACAGGTTTTTGTCGTAAT‑CCTGCGCGATGGCCTGAtg > 1:198993/1‑251 (MQ=255) aCTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAAT‑CCTGCGCGATGGCCTGATGTGCGCCa < 2:554895/251‑1 (MQ=255) aaaaaGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGGTGGGAAAAAT‑GAGTTT‑AGCCCCCCACTTAATCGGTGACAAACCACGCTCCGGGTATCGCTTTGGGGGCGGGCCGGGTTTTGAGGTAAT‑ACTGAGCGAGGGCCTGTTGTGCGCCAcccccg > 2:31705/1‑248 (MQ=255) aGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTACTCGATGCAAAAGCa < 2:463596/171‑1 (MQ=255) aGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGAAAAAAT‑GAGTTT‑TGCCCCCTCCTTACTCGATGCAAAAGCa > 1:463596/1‑171 (MQ=255) ggCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGAAAAAAT‑GAGTTT‑AGCCCCCCACTTACTCGCTGCAAAAGCACGCTCTGGTTTTCGTCTTGGAGACGGACAAGGTTATGACGTAATTCCT‑CGCGATGGCCTGATGTGCGCCCCCCCTGGGTATCat > 1:345301/1‑251 (MQ=255) gCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGGAAATAT‑GAGTTT‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGGGACGGACAGGTTTATGACGTAAT‑CCTGCGCGATGGCCTGATGGGCGCCCCCCCTGGTTTTCat > 1:199537/1‑250 (MQ=255) ggTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAAT‑CCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTAccg < 1:465148/251‑1 (MQ=255) ggtgCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAAT‑CCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTAccgcc < 1:294700/250‑1 (MQ=255) gtgCGGATGCTCGGTCAATAAAATATGGGGTTCGGGTCTTAAAAGTGTGCCGCTTTCCGCCCAGGCCATTCAGGCTGGTCAGGCGCAGAGCATTGTGGCGGTGGGTATGGAAAATAT‑TAGTTT‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAAT‑CCTGCGCTATGGCCGGATGTGCGCCACCCATGGTTATCATATGGTGATTAccgcc < 2:313208/250‑1 (MQ=255) ttCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGGAAATAT‑GAGGTT‑AGACCCCCACTTACTCGCTGCAAAAGCACACCCTGGTTATCGTCTTGTGGACGGACCGGTTTTTGACTGAAA‑CCTGCGCGATGGCCCGGTGTGCGCCACCCATGGTTTTCATTTgggggtttacgccggaaaagg > 2:143733/1‑234 (MQ=255) gTCAATACAGAATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGGAAATAT‑GGGTTT‑AGCCCCCTTCTTAACCGATGCAAAAACACGCTCTGGTTATCGTCTTGGGGACGGACAGGGTTAAGACGTAAA‑CCTTCGCGGAGGCCTGGTGTGGGCCCCCCATGGGTTTCATATGGGGATTACCGCCCAAAACGGGGCTa > 1:320266/1‑250 (MQ=255) gTCAATAACGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGGAAATAT‑GTGTTT‑AGCCCCCTACTTACTCGATGCCAAAGCACGCCCTGGTTATCGTCTTTGAGTCGGACAGGTTTATGACGTAAT‑TCTGCGCGATGGCCTGGTGTGCGCCCCCCATGGGTATCTTATGGGGATTACCGCCGAAAACGTGGCTa > 1:313974/1‑250 (MQ=255) tAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAAT‑CCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTG‑AAATg < 1:133183/250‑1 (MQ=255) gcgcTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGGAAATAT‑GAGTTT‑TGCCCCCTACTTTCTCGAAGCAAAAGCAAGCTCTGGTTATCGTCTTGGGGACGGACAGGGTTATGACGGAAT‑CCTGCGCGATGGCCTGATGTGCGCCCCCCCTGGTTTTTATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGGACGGGATTAACCCTG‑AAATGCAGGATGaaat > 1:43134/1‑249 (MQ=255) tGCCGCCCAGGCCATGCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAAT‑CCTGCGCGATGGCCTGATGTGCGCCACCCAGGGTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTG‑AAATGCAGGATGAACTGgc < 2:479698/249‑1 (MQ=255) gccgccCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCTTCTGGGAGACGGACAGGTTTATGACGTAAT‑CCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTGCCCGTG‑AAATGCAGGATGAACTGGCGCt < 2:450863/251‑1 (MQ=255) cgccCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAAT‑CCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTG‑AAATGCAGGATGAACTGGCGCTAc < 1:257443/251‑1 (MQ=255) cAGGCCATTCAGGCAGGTCAGGCGCAGAGCATGGTGGGGGGGGGTATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAAT‑CCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTG‑AAATGCAGGATGAACTGGCGCTACATTc < 2:6251/251‑1 (MQ=255) ccATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAAT‑CCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTG‑AAATGCAGGATGAACTGGCGCTACAtt < 1:540661/246‑1 (MQ=255) ccATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTTCTCGATGCAAAAGCACGCCCTGGGTATCGTCTTGGAGACGGACAGGGTTATGACGTAAT‑CCTGCGCGATGGCCTGATGTGCGCCCCCCCTGGGTTTCCTATGGGGGTTACCGCCGAAAACGTGGGTAAAGAAGACGGGAATACCCGTG‑AAATGCAGGGTGAACTGGGGCTACAtt > 2:540661/1‑246 (MQ=255) tCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAAT‑CCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTG‑AAATGCAGGATGAACTGGCGCTACATTCACAGCGt < 2:313974/250‑1 (MQ=255) caggcaggTCAGGCGCAGAGCAGTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTGCTCGATGCAAAAGCACTCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAAG‑CCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAAGTACCCGTG‑AAATGCAGGATGAACTGGCGCTACATTCACAGCGTaa < 2:498915/251‑1 (MQ=255) ggCGCAGAGCATTGTGGCGGGGGGTTTGGCAAATAT‑GAGTTT‑TGCCCCCTACTTACTCGATGCCAAAGCACGCTCTGGTTTTCGTCTTTGGGACGGACAGGGTTATGACGTAAT‑CCTGCGCGATGGCCTGATGTGCGCCACCCATGGGTATCATTTGGGGGTTACCGCCGAAAACGTGGGTAAAGAGt > 1:44413/1‑188 (MQ=255) ggCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAAT‑CCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGt < 2:44413/188‑1 (MQ=255) gcAGAGCATTGTGGCGGGGGGTATGGGAAAAAT‑GAGCTT‑AACCCCCTACTTACTCGAGGCAAAAGCACCCTCTGGTTATCGTCTTGGTGACGGACAGGTTTATGACGTAAT‑CCTGCGCGATGGCCTGATGGGCGCCCCCCCTGGTTATTATATGGGGGATACCGCCGCAAACGCGGCCAAAGAGTACGGACTTTCCCCTGGAAAT‑CAGGAGGAACTGGCGCAACCTTCCCAGCGTAAAACGGCAGCCGcc > 2:526053/1‑249 (MQ=255) gcAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAAT‑CCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTG‑AAATGCAGGATGAACTGGCGCTACATTCACAGCGTAAAGCGGCAGCCGCaa < 2:194950/251‑1 (MQ=255) aTTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAAT‑CCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTG‑AAATGCAGGATGAACTGGCGCTACATTCACAGCGTAAAGCGGCAGCCGCAATTGAGTc < 2:199537/251‑1 (MQ=255) ggCGGGGGGTATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTCCTCGATGCAAAATCACGCTCTGGTTATCGTCTGGGAGACGTACAGGTTTATGACGTAAT‑CCTGCGCGATGGCCTGATGTGCTCCTCCCAGTGTTATCATATGGTGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTG‑AAATGCAGTATGTACTGGCGCTTCATTCACAGCGTAATGCGGCAGCCGCAATTGAGTCCgtt < 2:37921/250‑3 (MQ=255) ggggggTATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAAT‑CCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTG‑AAATGCAGGATGAACTGGCGCTACATTCACAGCGTAAAGCGGCAGCCGCAATTGAGTCCGGTGCtt > 2:551215/1‑251 (MQ=255) ggggggTATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAAT‑CCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTG‑AAATGCAGGATGAACTGGCGCTACATTCACAGCGTAAAGCGGCAGCCGCAATTGAGTCCGGTGCtt > 2:298574/1‑251 (MQ=255) gggggTATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAAT‑CCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTG‑AAATGCAGGATGAACTGGCGCTACATTCACAGCGTAAAGCGGCAGCCGCAATTGAGTCCGGTGCttt < 1:362496/251‑1 (MQ=255) gTATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAAT‑CCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTG‑AAATGCAGGATGAACTGGCGCTACATTCACAGCGTAAAGCGGCAGCCGCAATTGAGTCCGGTGCTTTTACa < 1:327418/251‑1 (MQ=255) | CGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATAT‑GAGTTT‑AGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAAT‑CCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTG‑AAATGCAGGATGAACTGGCGCTACATTCACAGCGTAAAGCGGCAGCCGCAATTGAGTCCGGTGCTTTTACA > NC_000913/2326200‑2326699 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |